RNA–Protein interactions for RNA: ENST00000368985.7

CTSS-201, Transcript of cathepsin S, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSS, Length 4,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-201ENST00000368985 CPS1P31327 1500 aa7.46□□□□□ -1.21
CTSS-201ENST00000368985 PTPRKQ15262 1439 aa7.46□□□□□ -1.21
CTSS-201ENST00000368985 UNC13BO14795 1591 aa7.46□□□□□ -1.22
CTSS-201ENST00000368985 NEURL4Q96JN8 1562 aa7.45□□□□□ -1.22
CTSS-201ENST00000368985 UBR1Q8IWV7 1749 aa7.44□□□□□ -1.22
CTSS-201ENST00000368985 ATP1B4Q9UN42 357 aaPredicted RBP7.44□□□□□ -1.22
CTSS-201ENST00000368985 SLIT1O75093 1534 aa7.44□□□□□ -1.22
CTSS-201ENST00000368985 UGGT1Q9NYU2 1555 aa7.44□□□□□ -1.22
CTSS-201ENST00000368985 DHX29Q7Z478 1369 aaKnown RBP7.43□□□□□ -1.22
CTSS-201ENST00000368985 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.43□□□□□ -1.22
CTSS-201ENST00000368985 ABCC3O15438 1527 aa7.43□□□□□ -1.22
CTSS-201ENST00000368985 NWD1Q149M9 1564 aa7.43□□□□□ -1.22
CTSS-201ENST00000368985 PIK3C2BO00750 1634 aa7.43□□□□□ -1.22
CTSS-201ENST00000368985 KCNH8Q96L42 1107 aa7.42□□□□□ -1.22
CTSS-201ENST00000368985 DMRT2Q9Y5R5 561 aa7.42□□□□□ -1.22
CTSS-201ENST00000368985 CCNB3Q8WWL7 1395 aa7.42□□□□□ -1.22
CTSS-201ENST00000368985 RPRD2Q5VT52 1461 aaKnown RBP7.42□□□□□ -1.22
CTSS-201ENST00000368985 TET3O43151 1660 aa7.42□□□□□ -1.22
CTSS-201ENST00000368985 IQGAP1P46940 1657 aa7.42□□□□□ -1.22
CTSS-201ENST00000368985 MYOM3Q5VTT5 1437 aa7.41□□□□□ -1.22
CTSS-201ENST00000368985 ARHGAP23Q9P227 1491 aa7.41□□□□□ -1.22
CTSS-201ENST00000368985 DIP2AQ14689 1571 aa7.41□□□□□ -1.22
CTSS-201ENST00000368985 IQGAP3Q86VI3 1631 aa7.41□□□□□ -1.22
CTSS-201ENST00000368985 FBXO41Q8TF61 875 aa7.41□□□□□ -1.22
CTSS-201ENST00000368985 RAPGEF3O95398 923 aa7.4□□□□□ -1.22
CTSS-201ENST00000368985 CEP152O94986 1710 aa7.4□□□□□ -1.22
CTSS-201ENST00000368985 P3H3Q8IVL6 736 aa7.39□□□□□ -1.23
CTSS-201ENST00000368985 EFCAB6Q5THR3 1501 aa7.38□□□□□ -1.23
CTSS-201ENST00000368985 MTUS2Q5JR59 1369 aa7.38□□□□□ -1.23
CTSS-201ENST00000368985 PKD2Q13563 968 aa7.37□□□□□ -1.23
CTSS-201ENST00000368985 PCGF6Q9BYE7 350 aa7.37□□□□□ -1.23
CTSS-201ENST00000368985 ERVK-7P63135 1459 aa7.37□□□□□ -1.23
CTSS-201ENST00000368985 PRAG1Q86YV5 1406 aa7.36□□□□□ -1.23
CTSS-201ENST00000368985 SPAG9O60271 1321 aaKnown RBP7.36□□□□□ -1.23
CTSS-201ENST00000368985 ADGRB3O60242 1522 aa7.35□□□□□ -1.23
CTSS-201ENST00000368985 XIRP1Q702N8 1843 aaKnown RBP7.35□□□□□ -1.23
CTSS-201ENST00000368985 LAMC1P11047 1609 aa7.35□□□□□ -1.23
CTSS-201ENST00000368985 ARID3CA6NKF2 412 aa7.35□□□□□ -1.23
CTSS-201ENST00000368985 ROCK1Q13464 1354 aa7.35□□□□□ -1.23
CTSS-201ENST00000368985 ZMYM3Q14202 1370 aa7.35□□□□□ -1.23
CTSS-201ENST00000368985 NCOA3Q9Y6Q9 1424 aa7.33□□□□□ -1.24
CTSS-201ENST00000368985 DAPK1P53355 1430 aa7.33□□□□□ -1.24
CTSS-201ENST00000368985 PLPPR3Q6T4P5 718 aa7.33□□□□□ -1.24
CTSS-201ENST00000368985 NOS1P29475 1434 aa7.32□□□□□ -1.24
CTSS-201ENST00000368985 FGD6Q6ZV73 1430 aa7.32□□□□□ -1.24
CTSS-201ENST00000368985 STRCP1A6NGW2 1772 aa7.32□□□□□ -1.24
CTSS-201ENST00000368985 NKTRP30414 1462 aaKnown RBP7.32□□□□□ -1.24
CTSS-201ENST00000368985 CHD2O14647 1828 aaKnown RBP7.31□□□□□ -1.24
CTSS-201ENST00000368985 APLP2Q06481 763 aa7.31□□□□□ -1.24
CTSS-201ENST00000368985 ALKQ9UM73 1620 aa7.31□□□□□ -1.24
CTSS-201ENST00000368985 ACIN1Q9UKV3 1341 aaKnown RBP7.31□□□□□ -1.24
CTSS-201ENST00000368985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.31□□□□□ -1.24
CTSS-201ENST00000368985 HNRNPUL2Q1KMD3 747 aaKnown RBP7.31□□□□□ -1.24
CTSS-201ENST00000368985 CFDP1Q9UEE9 299 aaPredicted RBP7.31□□□□□ -1.24
CTSS-201ENST00000368985 ABCC5O15440 1437 aa7.3□□□□□ -1.24
CTSS-201ENST00000368985 TMEM131LA2VDJ0 1609 aa7.3□□□□□ -1.24
CTSS-201ENST00000368985 TNRQ92752 1358 aa7.3□□□□□ -1.24
CTSS-201ENST00000368985 SPHKAPQ2M3C7 1700 aa7.3□□□□□ -1.24
CTSS-201ENST00000368985 E9PCH4 1651 aa7.29□□□□□ -1.24
CTSS-201ENST00000368985 AFAP1Q8N556 730 aa7.29□□□□□ -1.24
CTSS-201ENST00000368985 SETBP1Q9Y6X0 1596 aa7.28□□□□□ -1.24
CTSS-201ENST00000368985 XRN1Q8IZH2 1706 aaKnown RBP7.27□□□□□ -1.24
CTSS-201ENST00000368985 CERKQ8TCT0 537 aa7.27□□□□□ -1.25
CTSS-201ENST00000368985 SETD1AO15047 1707 aaKnown RBP7.27□□□□□ -1.25
CTSS-201ENST00000368985 KNDC1Q76NI1 1749 aa7.27□□□□□ -1.25
CTSS-201ENST00000368985 IFT172Q9UG01 1749 aa7.27□□□□□ -1.25
CTSS-201ENST00000368985 ARID4BQ4LE39 1312 aaPredicted RBP7.27□□□□□ -1.25
CTSS-201ENST00000368985 SCAF11Q99590 1463 aaKnown RBP7.26□□□□□ -1.25
CTSS-201ENST00000368985 ILDR1Q86SU0 546 aaPredicted RBP7.26□□□□□ -1.25
CTSS-201ENST00000368985 PIK3R4Q99570 1358 aa7.26□□□□□ -1.25
CTSS-201ENST00000368985 NPHP4O75161 1426 aaPredicted RBP7.25□□□□□ -1.25
CTSS-201ENST00000368985 ANKRD30AQ9BXX3 1397 aa7.25□□□□□ -1.25
CTSS-201ENST00000368985 SHPRHQ149N8 1683 aa7.25□□□□□ -1.25
CTSS-201ENST00000368985 TRPM2O94759 1503 aa7.24□□□□□ -1.25
CTSS-201ENST00000368985 ITGAEP38570 1179 aa7.24□□□□□ -1.25
CTSS-201ENST00000368985 MYO5BQ9ULV0 1848 aa7.24□□□□□ -1.25
CTSS-201ENST00000368985 ZFYVE9O95405 1425 aa7.24□□□□□ -1.25
CTSS-201ENST00000368985 RRBP1Q9P2E9 1410 aaKnown RBP7.24□□□□□ -1.25
CTSS-201ENST00000368985 KCNA4P22459 653 aa7.24□□□□□ -1.25
CTSS-201ENST00000368985 AHDC1Q5TGY3 1603 aaPredicted RBP7.23□□□□□ -1.25
CTSS-201ENST00000368985 KIF1BO60333 1816 aa7.23□□□□□ -1.25
CTSS-201ENST00000368985 NRXN3Q9Y4C0 1643 aa7.23□□□□□ -1.25
CTSS-201ENST00000368985 KANK1Q14678 1352 aa7.23□□□□□ -1.25
CTSS-201ENST00000368985 LRRC7Q96NW7 1537 aa7.23□□□□□ -1.25
CTSS-201ENST00000368985 DCCP43146 1447 aa7.22□□□□□ -1.25
CTSS-201ENST00000368985 KIF15Q9NS87 1388 aa7.22□□□□□ -1.25
CTSS-201ENST00000368985 NHSL1Q5SYE7 1610 aa7.21□□□□□ -1.25
CTSS-201ENST00000368985 PPLO60437 1756 aa7.21□□□□□ -1.25
CTSS-201ENST00000368985 HNRNPMP52272 730 aaKnown RBP eCLIP7.21□□□□□ -1.26
CTSS-201ENST00000368985 ESF1Q9H501 851 aaKnown RBP7.2□□□□□ -1.26
CTSS-201ENST00000368985 MED1Q15648 1581 aaPredicted RBP7.2□□□□□ -1.26
CTSS-201ENST00000368985 TSPY4P0CV99 314 aa7.2□□□□□ -1.26
CTSS-201ENST00000368985 TSPY10P0CW01 314 aa7.2□□□□□ -1.26
CTSS-201ENST00000368985 THEMISQ8N1K5 641 aaPredicted RBP7.2□□□□□ -1.26
CTSS-201ENST00000368985 PLEKHG1Q9ULL1 1385 aa7.19□□□□□ -1.26
CTSS-201ENST00000368985 COL22A1Q8NFW1 1626 aaPredicted RBP7.19□□□□□ -1.26
CTSS-201ENST00000368985 TMEM2Q9UHN6 1383 aa7.18□□□□□ -1.26
CTSS-201ENST00000368985 FAM135BQ49AJ0 1406 aa7.18□□□□□ -1.26
CTSS-201ENST00000368985 ANKRD50Q9ULJ7 1429 aa7.17□□□□□ -1.26
CTSS-201ENST00000368985 SLC52A1Q9NWF4 448 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms