RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 IQGAP3Q86VI3 1631 aa34.9■■■■□ 3.18
SNX3-203ENST00000368979 FAM135AQ9P2D6 1515 aa34.89■■■■□ 3.18
SNX3-203ENST00000368979 A2MP01023 1474 aa34.88■■■■□ 3.17
SNX3-203ENST00000368979 DIP2CQ9Y2E4 1556 aa34.88■■■■□ 3.17
SNX3-203ENST00000368979 SIN3AQ96ST3 1273 aa34.85■■■■□ 3.17
SNX3-203ENST00000368979 BCORL1Q5H9F3 1711 aa34.81■■■■□ 3.16
SNX3-203ENST00000368979 ANKRD30BQ9BXX2 1392 aa34.8■■■■□ 3.16
SNX3-203ENST00000368979 COL17A1Q9UMD9 1497 aaPredicted RBP34.79■■■■□ 3.16
SNX3-203ENST00000368979 MROH1Q8NDA8 1641 aa34.78■■■■□ 3.16
SNX3-203ENST00000368979 FOXD1Q16676 465 aa34.78■■■■□ 3.16
SNX3-203ENST00000368979 YEATS2Q9ULM3 1422 aa34.78■■■■□ 3.16
SNX3-203ENST00000368979 PRDM15P57071 1507 aaPredicted RBP34.78■■■■□ 3.16
SNX3-203ENST00000368979 RNF17Q9BXT8 1623 aaKnown RBP34.77■■■■□ 3.16
SNX3-203ENST00000368979 PKD2Q13563 968 aa34.76■■■■□ 3.16
SNX3-203ENST00000368979 VWDEQ8N2E2 1590 aa34.76■■■■□ 3.16
SNX3-203ENST00000368979 NEUROD1Q13562 356 aa34.75■■■■□ 3.15
SNX3-203ENST00000368979 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.74■■■■□ 3.15
SNX3-203ENST00000368979 TIMELESSQ9UNS1 1208 aa34.72■■■■□ 3.15
SNX3-203ENST00000368979 KIF3BO15066 747 aa34.71■■■■□ 3.15
SNX3-203ENST00000368979 REREQ9P2R6 1566 aa34.67■■■■□ 3.14
SNX3-203ENST00000368979 RPRD2Q5VT52 1461 aaKnown RBP34.65■■■■□ 3.14
SNX3-203ENST00000368979 TET3O43151 1660 aa34.65■■■■□ 3.14
SNX3-203ENST00000368979 ATP10AO60312 1499 aa34.64■■■■□ 3.14
SNX3-203ENST00000368979 KANK1Q14678 1352 aa34.64■■■■□ 3.14
SNX3-203ENST00000368979 ARHGEF40Q8TER5 1519 aa34.64■■■■□ 3.14
SNX3-203ENST00000368979 TONSLQ96HA7 1378 aa34.61■■■■□ 3.13
SNX3-203ENST00000368979 E9PCH4 1651 aa34.6■■■■□ 3.13
SNX3-203ENST00000368979 LMTK2Q8IWU2 1503 aa34.59■■■■□ 3.13
SNX3-203ENST00000368979 AGLP35573 1532 aa34.54■■■■□ 3.12
SNX3-203ENST00000368979 CEP152O94986 1710 aa34.54■■■■□ 3.12
SNX3-203ENST00000368979 PLA2R1Q13018 1463 aa34.52■■■■□ 3.12
SNX3-203ENST00000368979 EFCAB6Q5THR3 1501 aa34.52■■■■□ 3.12
SNX3-203ENST00000368979 SIGLEC1Q9BZZ2 1709 aa34.49■■■■□ 3.11
SNX3-203ENST00000368979 ABCC3O15438 1527 aa34.48■■■■□ 3.11
SNX3-203ENST00000368979 ZC3H13Q5T200 1668 aaKnown RBP34.47■■■■□ 3.11
SNX3-203ENST00000368979 GGT6Q6P531 493 aa34.46■■■■□ 3.11
SNX3-203ENST00000368979 PPP1R15AO75807 674 aaPredicted RBP34.45■■■■□ 3.11
SNX3-203ENST00000368979 SPHKAPQ2M3C7 1700 aa34.45■■■■□ 3.11
SNX3-203ENST00000368979 TRPM2O94759 1503 aa34.43■■■■□ 3.1
SNX3-203ENST00000368979 PTPRTO14522 1441 aa34.43■■■■□ 3.1
SNX3-203ENST00000368979 CCDC144AA2RUR9 1427 aa34.42■■■■□ 3.1
SNX3-203ENST00000368979 CAMSAP1Q5T5Y3 1602 aa34.41■■■■□ 3.1
SNX3-203ENST00000368979 L3MBTL2Q969R5 705 aa34.37■■■■□ 3.09
SNX3-203ENST00000368979 WASHC2CQ9Y4E1 1318 aa34.35■■■■□ 3.09
SNX3-203ENST00000368979 NPATQ14207 1427 aa34.33■■■■□ 3.09
SNX3-203ENST00000368979 CLTCL1P53675 1640 aa34.3■■■■□ 3.08
SNX3-203ENST00000368979 ARHGAP31Q2M1Z3 1444 aa34.29■■■■□ 3.08
SNX3-203ENST00000368979 PPP6R1Q9UPN7 881 aa34.27■■■■□ 3.08
SNX3-203ENST00000368979 CNTLNQ9NXG0 1405 aa34.21■■■■□ 3.07
SNX3-203ENST00000368979 SPATA31E1Q6ZUB1 1445 aa34.2■■■■□ 3.07
SNX3-203ENST00000368979 CLTCQ00610 1675 aaKnown RBP34.19■■■■□ 3.06
SNX3-203ENST00000368979 NOS1P29475 1434 aa34.19■■■■□ 3.06
SNX3-203ENST00000368979 NEURL4Q96JN8 1562 aa34.19■■■■□ 3.06
SNX3-203ENST00000368979 UGGT1Q9NYU2 1555 aa34.18■■■■□ 3.06
SNX3-203ENST00000368979 ZNF316A6NFI3 1004 aaPredicted RBP34.17■■■■□ 3.06
SNX3-203ENST00000368979 UHRF1BP1Q6BDS2 1440 aa34.15■■■■□ 3.06
SNX3-203ENST00000368979 PREX1Q8TCU6 1659 aa34.14■■■■□ 3.06
SNX3-203ENST00000368979 SYNMO15061 1565 aa34.13■■■■□ 3.05
SNX3-203ENST00000368979 NBPF8Q3BBV2 869 aa34.12■■■■□ 3.05
SNX3-203ENST00000368979 AEBP2Q6ZN18 517 aaPredicted RBP34.12■■■■□ 3.05
SNX3-203ENST00000368979 PIK3C2BO00750 1634 aa34.12■■■■□ 3.05
SNX3-203ENST00000368979 KIF1BO60333 1816 aa34.11■■■■□ 3.05
SNX3-203ENST00000368979 MLECQ14165 292 aa34.1■■■■□ 3.05
SNX3-203ENST00000368979 CFAP65Q6ZU64 1925 aaKnown RBP34.09■■■■□ 3.05
SNX3-203ENST00000368979 ARID4BQ4LE39 1312 aaPredicted RBP34.08■■■■□ 3.05
SNX3-203ENST00000368979 RGL3Q3MIN7 710 aa34.06■■■■□ 3.04
SNX3-203ENST00000368979 DCAF11Q8TEB1 546 aa34.06■■■■□ 3.04
SNX3-203ENST00000368979 ADGRB3O60242 1522 aa34.06■■■■□ 3.04
SNX3-203ENST00000368979 MROH2AA6NES4 1674 aa34.05■■■■□ 3.04
SNX3-203ENST00000368979 ERVK-7P63135 1459 aa34.05■■■■□ 3.04
SNX3-203ENST00000368979 SPATA31D1Q6ZQQ2 1576 aa34.01■■■■□ 3.03
SNX3-203ENST00000368979 PRAG1Q86YV5 1406 aa34■■■■□ 3.03
SNX3-203ENST00000368979 RALGAPBQ86X10 1494 aa34■■■■□ 3.03
SNX3-203ENST00000368979 KDM2AQ9Y2K7 1162 aa33.98■■■■□ 3.03
SNX3-203ENST00000368979 IFT172Q9UG01 1749 aa33.97■■■■□ 3.03
SNX3-203ENST00000368979 ESF1Q9H501 851 aaKnown RBP33.95■■■■□ 3.03
SNX3-203ENST00000368979 TRPM1Q7Z4N2 1603 aa33.95■■■■□ 3.02
SNX3-203ENST00000368979 ZNF326Q5BKZ1 582 aaKnown RBP33.94■■■■□ 3.02
SNX3-203ENST00000368979 ZMYM3Q14202 1370 aa33.94■■■■□ 3.02
SNX3-203ENST00000368979 MADDQ8WXG6 1647 aa33.93■■■■□ 3.02
SNX3-203ENST00000368979 FBXO31Q5XUX0 539 aaPredicted RBP33.93■■■■□ 3.02
SNX3-203ENST00000368979 STAC3Q96MF2 364 aa33.93■■■■□ 3.02
SNX3-203ENST00000368979 SLC52A1Q9NWF4 448 aa33.93■■■■□ 3.02
SNX3-203ENST00000368979 FER1L4A9Z1Z3 1794 aa33.91■■■■□ 3.02
SNX3-203ENST00000368979 MYOM2P54296 1465 aa33.9■■■■□ 3.02
SNX3-203ENST00000368979 IDI1Q13907 227 aa33.86■■■■□ 3.01
SNX3-203ENST00000368979 PPLO60437 1756 aa33.86■■■■□ 3.01
SNX3-203ENST00000368979 TMEM131LA2VDJ0 1609 aa33.86■■■■□ 3.01
SNX3-203ENST00000368979 CHGAP10645 457 aaKnown RBP33.82■■■■□ 3
SNX3-203ENST00000368979 EIF4G2P78344 907 aaKnown RBP eCLIP33.81■■■■□ 3
SNX3-203ENST00000368979 LAMC1P11047 1609 aa33.81■■■■□ 3
SNX3-203ENST00000368979 NRXN1Q9ULB1 1477 aa33.8■■■■□ 3
SNX3-203ENST00000368979 C3P01024 1663 aa33.8■■■■□ 3
SNX3-203ENST00000368979 RPGRIP1LQ68CZ1 1315 aa33.8■■■■□ 3
SNX3-203ENST00000368979 HSPA5P11021 654 aaKnown RBP33.79■■■■□ 3
SNX3-203ENST00000368979 GPRASP1Q5JY77 1395 aa33.79■■■■□ 3
SNX3-203ENST00000368979 MYO5BQ9ULV0 1848 aa33.78■■■■□ 3
SNX3-203ENST00000368979 NEXMIFQ5QGS0 1516 aa33.78■■■■□ 3
SNX3-203ENST00000368979 ROCK2O75116 1388 aaKnown RBP33.77■■■■□ 3
SNX3-203ENST00000368979 KIAA1210Q9ULL0 1709 aa33.77■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms