RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 CNTLNQ9NXG0 1405 aa13.5□□□□□ -0.25
SNX27-201ENST00000368838 CAMSAP1Q5T5Y3 1602 aa13.5□□□□□ -0.25
SNX27-201ENST00000368838 NCOA2Q15596 1464 aa13.48□□□□□ -0.25
SNX27-201ENST00000368838 ZMYM3Q14202 1370 aa13.48□□□□□ -0.25
SNX27-201ENST00000368838 CFAP65Q6ZU64 1925 aaKnown RBP13.48□□□□□ -0.25
SNX27-201ENST00000368838 ZNF142P52746 1687 aaPredicted RBP13.48□□□□□ -0.25
SNX27-201ENST00000368838 MBD5Q9P267 1494 aa13.48□□□□□ -0.25
SNX27-201ENST00000368838 AMER1Q5JTC6 1135 aaPredicted RBP13.47□□□□□ -0.25
SNX27-201ENST00000368838 CAMSAP2Q08AD1 1489 aa13.47□□□□□ -0.25
SNX27-201ENST00000368838 LRRC9Q6ZRR7 1453 aa13.45□□□□□ -0.26
SNX27-201ENST00000368838 NCOA1Q15788 1441 aa13.45□□□□□ -0.26
SNX27-201ENST00000368838 CEP170BQ9Y4F5 1589 aaPredicted RBP13.45□□□□□ -0.26
SNX27-201ENST00000368838 NCKAP5LQ9HCH0 1330 aa13.44□□□□□ -0.26
SNX27-201ENST00000368838 LTBP4Q8N2S1 1624 aa13.43□□□□□ -0.26
SNX27-201ENST00000368838 NPATQ14207 1427 aa13.43□□□□□ -0.26
SNX27-201ENST00000368838 CCDC141Q6ZP82 1450 aa13.43□□□□□ -0.26
SNX27-201ENST00000368838 PTPRTO14522 1441 aa13.42□□□□□ -0.26
SNX27-201ENST00000368838 PTPRKQ15262 1439 aa13.42□□□□□ -0.26
SNX27-201ENST00000368838 POLR1AO95602 1720 aaPredicted RBP13.41□□□□□ -0.26
SNX27-201ENST00000368838 KIF3BO15066 747 aa13.4□□□□□ -0.26
SNX27-201ENST00000368838 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.4□□□□□ -0.26
SNX27-201ENST00000368838 RTEL1-TNFRSF6BF6WH68 1400 aa13.4□□□□□ -0.26
SNX27-201ENST00000368838 RRBP1Q9P2E9 1410 aaKnown RBP13.4□□□□□ -0.26
SNX27-201ENST00000368838 DNMT1P26358 1616 aaKnown RBP13.39□□□□□ -0.27
SNX27-201ENST00000368838 CEP152O94986 1710 aa13.39□□□□□ -0.27
SNX27-201ENST00000368838 ARHGEF5Q12774 1597 aa13.39□□□□□ -0.27
SNX27-201ENST00000368838 FKBP8Q14318 412 aa13.39□□□□□ -0.27
SNX27-201ENST00000368838 KANK4Q5T7N3 995 aaPredicted RBP13.39□□□□□ -0.27
SNX27-201ENST00000368838 DHX29Q7Z478 1369 aaKnown RBP13.38□□□□□ -0.27
SNX27-201ENST00000368838 FBXO31Q5XUX0 539 aaPredicted RBP13.38□□□□□ -0.27
SNX27-201ENST00000368838 PCGF6Q9BYE7 350 aa13.37□□□□□ -0.27
SNX27-201ENST00000368838 KDM5DQ9BY66 1539 aa13.36□□□□□ -0.27
SNX27-201ENST00000368838 ZNF335Q9H4Z2 1342 aaPredicted RBP13.36□□□□□ -0.27
SNX27-201ENST00000368838 MYCNP04198 464 aaPredicted RBP13.35□□□□□ -0.27
SNX27-201ENST00000368838 A2ML1A8K2U0 1454 aa13.34□□□□□ -0.27
SNX27-201ENST00000368838 PLA2R1Q13018 1463 aa13.33□□□□□ -0.27
SNX27-201ENST00000368838 TCOF1Q13428 1488 aaKnown RBP13.33□□□□□ -0.27
SNX27-201ENST00000368838 RNF17Q9BXT8 1623 aaKnown RBP13.33□□□□□ -0.27
SNX27-201ENST00000368838 CROCC2H7BZ55 1655 aa13.33□□□□□ -0.28
SNX27-201ENST00000368838 NEURL4Q96JN8 1562 aa13.33□□□□□ -0.28
SNX27-201ENST00000368838 MAST1Q9Y2H9 1570 aa13.33□□□□□ -0.28
SNX27-201ENST00000368838 ATXN8OSP0DMR3 200 aa13.33□□□□□ -0.28
SNX27-201ENST00000368838 WASHC2CQ9Y4E1 1318 aa13.32□□□□□ -0.28
SNX27-201ENST00000368838 TNRQ92752 1358 aa13.32□□□□□ -0.28
SNX27-201ENST00000368838 TSPY4P0CV99 314 aa13.32□□□□□ -0.28
SNX27-201ENST00000368838 TSPY10P0CW01 314 aa13.32□□□□□ -0.28
SNX27-201ENST00000368838 PZPP20742 1482 aa13.32□□□□□ -0.28
SNX27-201ENST00000368838 ZC3H13Q5T200 1668 aaKnown RBP13.31□□□□□ -0.28
SNX27-201ENST00000368838 MROH1Q8NDA8 1641 aa13.3□□□□□ -0.28
SNX27-201ENST00000368838 EIF2AK4Q9P2K8 1649 aaKnown RBP13.3□□□□□ -0.28
SNX27-201ENST00000368838 PKD2Q13563 968 aa13.3□□□□□ -0.28
SNX27-201ENST00000368838 RSPH4AQ5TD94 716 aa13.3□□□□□ -0.28
SNX27-201ENST00000368838 DISP3Q9P2K9 1392 aa13.3□□□□□ -0.28
SNX27-201ENST00000368838 MYOM3Q5VTT5 1437 aa13.29□□□□□ -0.28
SNX27-201ENST00000368838 ABCC3O15438 1527 aa13.29□□□□□ -0.28
SNX27-201ENST00000368838 SPATA31D1Q6ZQQ2 1576 aa13.29□□□□□ -0.28
SNX27-201ENST00000368838 PTPN23Q9H3S7 1636 aa13.29□□□□□ -0.28
SNX27-201ENST00000368838 STRCP1A6NGW2 1772 aa13.28□□□□□ -0.28
SNX27-201ENST00000368838 MIA2Q96PC5 1412 aa13.28□□□□□ -0.28
SNX27-201ENST00000368838 IQSEC2Q5JU85 1478 aa13.28□□□□□ -0.28
SNX27-201ENST00000368838 FAM135AQ9P2D6 1515 aa13.27□□□□□ -0.28
SNX27-201ENST00000368838 UGGT1Q9NYU2 1555 aa13.27□□□□□ -0.28
SNX27-201ENST00000368838 UBAP1LF5GYI3 381 aa13.27□□□□□ -0.29
SNX27-201ENST00000368838 IQGAP1P46940 1657 aa13.27□□□□□ -0.29
SNX27-201ENST00000368838 UBR1Q8IWV7 1749 aa13.26□□□□□ -0.29
SNX27-201ENST00000368838 PPARGC1BQ86YN6 1023 aaKnown RBP13.26□□□□□ -0.29
SNX27-201ENST00000368838 ILDR2Q71H61 639 aa13.25□□□□□ -0.29
SNX27-201ENST00000368838 DUOX2Q9NRD8 1548 aa13.23□□□□□ -0.29
SNX27-201ENST00000368838 VWDEQ8N2E2 1590 aa13.23□□□□□ -0.29
SNX27-201ENST00000368838 ERVK-7P63135 1459 aa13.23□□□□□ -0.29
SNX27-201ENST00000368838 NLRP1Q9C000 1473 aa13.23□□□□□ -0.29
SNX27-201ENST00000368838 ABCC5O15440 1437 aa13.22□□□□□ -0.29
SNX27-201ENST00000368838 FGD6Q6ZV73 1430 aa13.22□□□□□ -0.29
SNX27-201ENST00000368838 RRP7BPQ9NSQ0 103 aa13.22□□□□□ -0.29
SNX27-201ENST00000368838 DEPDC5O75140 1603 aa13.22□□□□□ -0.29
SNX27-201ENST00000368838 SHANK2Q9UPX8 1470 aa13.22□□□□□ -0.29
SNX27-201ENST00000368838 ANKLE2Q86XL3 938 aa13.21□□□□□ -0.29
SNX27-201ENST00000368838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.21□□□□□ -0.29
SNX27-201ENST00000368838 NPHP4O75161 1426 aaPredicted RBP13.21□□□□□ -0.3
SNX27-201ENST00000368838 KIF15Q9NS87 1388 aa13.21□□□□□ -0.3
SNX27-201ENST00000368838 PIK3C2BO00750 1634 aa13.21□□□□□ -0.3
SNX27-201ENST00000368838 HRCP23327 699 aa13.2□□□□□ -0.3
SNX27-201ENST00000368838 PIP4K2BP78356 416 aa13.2□□□□□ -0.3
SNX27-201ENST00000368838 THEMISQ8N1K5 641 aaPredicted RBP13.2□□□□□ -0.3
SNX27-201ENST00000368838 CHIC2Q9UKJ5 165 aa13.2□□□□□ -0.3
SNX27-201ENST00000368838 DAPK1P53355 1430 aa13.2□□□□□ -0.3
SNX27-201ENST00000368838 MYO5BQ9ULV0 1848 aa13.2□□□□□ -0.3
SNX27-201ENST00000368838 PRDM15P57071 1507 aaPredicted RBP13.19□□□□□ -0.3
SNX27-201ENST00000368838 CPS1P31327 1500 aa13.19□□□□□ -0.3
SNX27-201ENST00000368838 XIRP1Q702N8 1843 aaKnown RBP13.18□□□□□ -0.3
SNX27-201ENST00000368838 MED14O60244 1454 aa13.17□□□□□ -0.3
SNX27-201ENST00000368838 ACIN1Q9UKV3 1341 aaKnown RBP13.16□□□□□ -0.3
SNX27-201ENST00000368838 ERBINQ96RT1 1412 aa13.16□□□□□ -0.3
SNX27-201ENST00000368838 ATF5Q9Y2D1 282 aaPredicted RBP13.15□□□□□ -0.3
SNX27-201ENST00000368838 ALKQ9UM73 1620 aa13.15□□□□□ -0.3
SNX27-201ENST00000368838 HSPA1LP34931 641 aa13.14□□□□□ -0.31
SNX27-201ENST00000368838 SYNMO15061 1565 aa13.13□□□□□ -0.31
SNX27-201ENST00000368838 SCAF11Q99590 1463 aaKnown RBP13.13□□□□□ -0.31
SNX27-201ENST00000368838 FAM50AQ14320 339 aaKnown RBP13.13□□□□□ -0.31
SNX27-201ENST00000368838 LTKP29376 864 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms