RNA–Protein interactions for RNA: ENST00000368761.9

TRAF3IP2-207, Transcript of TRAF3 interacting protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP2, Length 5,128 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-207ENST00000368761 CCDC39Q9UFE4 941 aa13.23□□□□□ -0.29
TRAF3IP2-207ENST00000368761 DDX49Q9Y6V7 483 aaKnown RBP13.22□□□□□ -0.29
TRAF3IP2-207ENST00000368761 CDR1P51861 262 aa13.22□□□□□ -0.29
TRAF3IP2-207ENST00000368761 WRNQ14191 1432 aaPredicted RBP eCLIP13.21□□□□□ -0.29
TRAF3IP2-207ENST00000368761 EIF4G2P78344 907 aaKnown RBP eCLIP13.21□□□□□ -0.29
TRAF3IP2-207ENST00000368761 ZNF592Q92610 1267 aa13.21□□□□□ -0.29
TRAF3IP2-207ENST00000368761 E9PSI1 815 aa13.21□□□□□ -0.3
TRAF3IP2-207ENST00000368761 JPH4Q96JJ6 628 aa13.21□□□□□ -0.3
TRAF3IP2-207ENST00000368761 PLCD4Q9BRC7 762 aa13.21□□□□□ -0.3
TRAF3IP2-207ENST00000368761 CHMP4AQ9BY43 222 aa13.21□□□□□ -0.3
TRAF3IP2-207ENST00000368761 PES1O00541 588 aaKnown RBP13.2□□□□□ -0.3
TRAF3IP2-207ENST00000368761 KIAA1211Q6ZU35 1233 aa13.2□□□□□ -0.3
TRAF3IP2-207ENST00000368761 CCAR2Q8N163 923 aaKnown RBP13.2□□□□□ -0.3
TRAF3IP2-207ENST00000368761 PDCL2Q8N4E4 241 aa13.2□□□□□ -0.3
TRAF3IP2-207ENST00000368761 OS9Q13438 667 aaPredicted RBP13.2□□□□□ -0.3
TRAF3IP2-207ENST00000368761 NFKBIBQ15653 356 aa13.2□□□□□ -0.3
TRAF3IP2-207ENST00000368761 INCENPQ9NQS7 918 aa13.19□□□□□ -0.3
TRAF3IP2-207ENST00000368761 ZHX1Q9UKY1 873 aaPredicted RBP13.19□□□□□ -0.3
TRAF3IP2-207ENST00000368761 KIF16BQ96L93 1317 aa13.19□□□□□ -0.3
TRAF3IP2-207ENST00000368761 GTF2A1P52655 376 aaPredicted RBP13.19□□□□□ -0.3
TRAF3IP2-207ENST00000368761 EFCAB2Q5VUJ9 269 aa13.19□□□□□ -0.3
TRAF3IP2-207ENST00000368761 FANCD2Q9BXW9 1451 aa13.18□□□□□ -0.3
TRAF3IP2-207ENST00000368761 RBM28Q9NW13 759 aaKnown RBP13.18□□□□□ -0.3
TRAF3IP2-207ENST00000368761 PLCD3Q8N3E9 789 aa13.17□□□□□ -0.3
TRAF3IP2-207ENST00000368761 TDRD9Q8NDG6 1382 aaKnown RBP13.17□□□□□ -0.3
TRAF3IP2-207ENST00000368761 ERCC4Q92889 916 aaPredicted RBP13.17□□□□□ -0.3
TRAF3IP2-207ENST00000368761 UQCRHLA0A096LP55 91 aa13.16□□□□□ -0.3
TRAF3IP2-207ENST00000368761 UQCRHP07919 91 aa13.16□□□□□ -0.3
TRAF3IP2-207ENST00000368761 MNS1Q8NEH6 495 aa13.16□□□□□ -0.3
TRAF3IP2-207ENST00000368761 ISY1Q9ULR0 285 aaKnown RBP13.16□□□□□ -0.3
TRAF3IP2-207ENST00000368761 PDE4AP27815 886 aa13.16□□□□□ -0.3
TRAF3IP2-207ENST00000368761 FAM193AP78312 1265 aa13.16□□□□□ -0.3
TRAF3IP2-207ENST00000368761 LMOD2Q6P5Q4 547 aa13.15□□□□□ -0.3
TRAF3IP2-207ENST00000368761 RSF1Q96T23 1441 aaPredicted RBP13.15□□□□□ -0.3
TRAF3IP2-207ENST00000368761 TDO2P48775 406 aa13.15□□□□□ -0.3
TRAF3IP2-207ENST00000368761 CCDC173Q0VFZ6 552 aa13.15□□□□□ -0.3
TRAF3IP2-207ENST00000368761 KIAA0754O94854 1291 aa13.15□□□□□ -0.31
TRAF3IP2-207ENST00000368761 NCAPD3P42695 1498 aa13.14□□□□□ -0.31
TRAF3IP2-207ENST00000368761 LMOD3Q0VAK6 560 aa13.14□□□□□ -0.31
TRAF3IP2-207ENST00000368761 RUFY1Q96T51 708 aa13.14□□□□□ -0.31
TRAF3IP2-207ENST00000368761 LETM1O95202 739 aaPredicted RBP13.14□□□□□ -0.31
TRAF3IP2-207ENST00000368761 TIGD1Q96MW7 591 aa13.14□□□□□ -0.31
TRAF3IP2-207ENST00000368761 TNNT1P13805 278 aa13.13□□□□□ -0.31
TRAF3IP2-207ENST00000368761 FGD1P98174 961 aa13.13□□□□□ -0.31
TRAF3IP2-207ENST00000368761 ATAD2BQ9ULI0 1458 aa13.13□□□□□ -0.31
TRAF3IP2-207ENST00000368761 PRDM10Q9NQV6 1147 aa13.13□□□□□ -0.31
TRAF3IP2-207ENST00000368761 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
TRAF3IP2-207ENST00000368761 TMCO5BA8MYB1 307 aa13.13□□□□□ -0.31
TRAF3IP2-207ENST00000368761 ZRSR2Q15696 482 aaKnown RBP13.12□□□□□ -0.31
TRAF3IP2-207ENST00000368761 PTPRGP23470 1445 aa13.12□□□□□ -0.31
TRAF3IP2-207ENST00000368761 NASPP49321 788 aaPredicted RBP13.12□□□□□ -0.31
TRAF3IP2-207ENST00000368761 CTR9Q6PD62 1173 aa13.12□□□□□ -0.31
TRAF3IP2-207ENST00000368761 KCNJ4P48050 445 aa13.12□□□□□ -0.31
TRAF3IP2-207ENST00000368761 ESPNB1AK53 854 aa13.12□□□□□ -0.31
TRAF3IP2-207ENST00000368761 IPO4Q8TEX9 1081 aaKnown RBP13.12□□□□□ -0.31
TRAF3IP2-207ENST00000368761 PSMD1Q99460 953 aa13.12□□□□□ -0.31
TRAF3IP2-207ENST00000368761 NEXNQ0ZGT2 675 aa13.11□□□□□ -0.31
TRAF3IP2-207ENST00000368761 GOLGA6L19H0YKK7 550 aa13.1□□□□□ -0.31
TRAF3IP2-207ENST00000368761 CHMP5Q9NZZ3 219 aa13.1□□□□□ -0.31
TRAF3IP2-207ENST00000368761 GOLGA6L7A0A1B0GV03 622 aa13.1□□□□□ -0.31
TRAF3IP2-207ENST00000368761 ERICH4A6NGS2 130 aa13.1□□□□□ -0.31
TRAF3IP2-207ENST00000368761 GOLGA6L10A6NI86 522 aa13.1□□□□□ -0.31
TRAF3IP2-207ENST00000368761 IFT140Q96RY7 1462 aa13.1□□□□□ -0.31
TRAF3IP2-207ENST00000368761 SETSIPP0DME0 302 aa13.09□□□□□ -0.31
TRAF3IP2-207ENST00000368761 HOMER1Q86YM7 354 aa13.09□□□□□ -0.31
TRAF3IP2-207ENST00000368761 RBM25P49756 843 aaKnown RBP13.09□□□□□ -0.31
TRAF3IP2-207ENST00000368761 KANK1Q14678 1352 aa13.09□□□□□ -0.31
TRAF3IP2-207ENST00000368761 FAM161AQ3B820 660 aa13.09□□□□□ -0.31
TRAF3IP2-207ENST00000368761 HIRIP3Q9BW71 556 aaPredicted RBP13.09□□□□□ -0.31
TRAF3IP2-207ENST00000368761 CCDC34Q96HJ3 373 aa13.09□□□□□ -0.31
TRAF3IP2-207ENST00000368761 IFT57Q9NWB7 429 aa13.08□□□□□ -0.32
TRAF3IP2-207ENST00000368761 CAVIN1Q6NZI2 390 aaKnown RBP13.08□□□□□ -0.32
TRAF3IP2-207ENST00000368761 FAM107BQ9H098 131 aa13.08□□□□□ -0.32
TRAF3IP2-207ENST00000368761 SLC4A3P48751 1232 aa13.07□□□□□ -0.32
TRAF3IP2-207ENST00000368761 CLIP1P30622 1438 aa13.07□□□□□ -0.32
TRAF3IP2-207ENST00000368761 GTPBP4Q9BZE4 634 aaKnown RBP13.07□□□□□ -0.32
TRAF3IP2-207ENST00000368761 TOM1O60784 492 aa13.07□□□□□ -0.32
TRAF3IP2-207ENST00000368761 EEA1Q15075 1411 aa13.06□□□□□ -0.32
TRAF3IP2-207ENST00000368761 CT47A1Q5JQC4 288 aaPredicted RBP13.06□□□□□ -0.32
TRAF3IP2-207ENST00000368761 U2SURPO15042 1029 aaKnown RBP13.06□□□□□ -0.32
TRAF3IP2-207ENST00000368761 SARNPP82979 210 aaKnown RBP13.06□□□□□ -0.32
TRAF3IP2-207ENST00000368761 DDX11Q96FC9 970 aa13.06□□□□□ -0.32
TRAF3IP2-207ENST00000368761 CBX1P83916 185 aa13.05□□□□□ -0.32
TRAF3IP2-207ENST00000368761 BECN2A8MW95 431 aa13.05□□□□□ -0.32
TRAF3IP2-207ENST00000368761 GGT6Q6P531 493 aa13.05□□□□□ -0.32
TRAF3IP2-207ENST00000368761 MFAP1P55081 439 aaKnown RBP13.04□□□□□ -0.32
TRAF3IP2-207ENST00000368761 PIP4K2BP78356 416 aa13.04□□□□□ -0.32
TRAF3IP2-207ENST00000368761 RWDD1Q9H446 243 aaPredicted RBP13.04□□□□□ -0.32
TRAF3IP2-207ENST00000368761 TMX4Q9H1E5 349 aaPredicted RBP13.04□□□□□ -0.32
TRAF3IP2-207ENST00000368761 BCCIPQ9P287 314 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRAF3IP2-207ENST00000368761 RCAN3Q9UKA8 241 aa13.03□□□□□ -0.32
TRAF3IP2-207ENST00000368761 ATP6V1DQ9Y5K8 247 aa13.03□□□□□ -0.32
TRAF3IP2-207ENST00000368761 ZNF622Q969S3 477 aaKnown RBP eCLIP13.02□□□□□ -0.32
TRAF3IP2-207ENST00000368761 EIF3JO75822 258 aaKnown RBP13.02□□□□□ -0.32
TRAF3IP2-207ENST00000368761 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.02□□□□□ -0.32
TRAF3IP2-207ENST00000368761 CFDP1Q9UEE9 299 aaPredicted RBP13.02□□□□□ -0.32
TRAF3IP2-207ENST00000368761 TPM1P09493 284 aa13.02□□□□□ -0.33
TRAF3IP2-207ENST00000368761 ST18O60284 1047 aa13.01□□□□□ -0.33
TRAF3IP2-207ENST00000368761 PMFBP1Q8TBY8 1022 aa13.01□□□□□ -0.33
TRAF3IP2-207ENST00000368761 UBAP1LF5GYI3 381 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms