RNA–Protein interactions for RNA: ENST00000368516.1

C1orf43-203, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2 BASIC

Gene C1orf43, Length 872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-203ENST00000368516 CAMSAP1Q5T5Y3 1602 aa25.27■■□□□ 1.64
C1orf43-203ENST00000368516 KDM5DQ9BY66 1539 aa25.27■■□□□ 1.64
C1orf43-203ENST00000368516 APLP2Q06481 763 aa25.25■■□□□ 1.63
C1orf43-203ENST00000368516 CEP170BQ9Y4F5 1589 aaPredicted RBP25.25■■□□□ 1.63
C1orf43-203ENST00000368516 PLA2R1Q13018 1463 aa25.2■■□□□ 1.62
C1orf43-203ENST00000368516 PZPP20742 1482 aa25.19■■□□□ 1.62
C1orf43-203ENST00000368516 RNF17Q9BXT8 1623 aaKnown RBP25.19■■□□□ 1.62
C1orf43-203ENST00000368516 WASHC2CQ9Y4E1 1318 aa25.18■■□□□ 1.62
C1orf43-203ENST00000368516 EIF2AK4Q9P2K8 1649 aaKnown RBP25.18■■□□□ 1.62
C1orf43-203ENST00000368516 A2ML1A8K2U0 1454 aa25.17■■□□□ 1.62
C1orf43-203ENST00000368516 TNRQ92752 1358 aa25.15■■□□□ 1.62
C1orf43-203ENST00000368516 PTPN23Q9H3S7 1636 aa25.15■■□□□ 1.62
C1orf43-203ENST00000368516 ZC3H13Q5T200 1668 aaKnown RBP25.14■■□□□ 1.62
C1orf43-203ENST00000368516 PKD2Q13563 968 aa25.14■■□□□ 1.62
C1orf43-203ENST00000368516 TCOF1Q13428 1488 aaKnown RBP25.14■■□□□ 1.61
C1orf43-203ENST00000368516 CROCC2H7BZ55 1655 aa25.13■■□□□ 1.61
C1orf43-203ENST00000368516 DNMT1P26358 1616 aaKnown RBP25.13■■□□□ 1.61
C1orf43-203ENST00000368516 NCKAP5LQ9HCH0 1330 aa25.12■■□□□ 1.61
C1orf43-203ENST00000368516 SHANK2Q9UPX8 1470 aa25.12■■□□□ 1.61
C1orf43-203ENST00000368516 LTBP4Q8N2S1 1624 aa25.12■■□□□ 1.61
C1orf43-203ENST00000368516 DUOX2Q9NRD8 1548 aa25.12■■□□□ 1.61
C1orf43-203ENST00000368516 FBXO31Q5XUX0 539 aaPredicted RBP25.11■■□□□ 1.61
C1orf43-203ENST00000368516 ABCC3O15438 1527 aa25.09■■□□□ 1.61
C1orf43-203ENST00000368516 FGD6Q6ZV73 1430 aa25.09■■□□□ 1.61
C1orf43-203ENST00000368516 ABCC5O15440 1437 aa25.07■■□□□ 1.6
C1orf43-203ENST00000368516 MROH1Q8NDA8 1641 aa25.07■■□□□ 1.6
C1orf43-203ENST00000368516 IQSEC2Q5JU85 1478 aa25.07■■□□□ 1.6
C1orf43-203ENST00000368516 NLRP1Q9C000 1473 aa25.06■■□□□ 1.6
C1orf43-203ENST00000368516 KIF15Q9NS87 1388 aa25.05■■□□□ 1.6
C1orf43-203ENST00000368516 POLR1AO95602 1720 aaPredicted RBP25.05■■□□□ 1.6
C1orf43-203ENST00000368516 DAPK1P53355 1430 aa25.04■■□□□ 1.6
C1orf43-203ENST00000368516 CEP152O94986 1710 aa25.03■■□□□ 1.6
C1orf43-203ENST00000368516 ERBINQ96RT1 1412 aa25.03■■□□□ 1.6
C1orf43-203ENST00000368516 SPATA31D1Q6ZQQ2 1576 aa25.01■■□□□ 1.59
C1orf43-203ENST00000368516 PRDM15P57071 1507 aaPredicted RBP25■■□□□ 1.59
C1orf43-203ENST00000368516 UGGT1Q9NYU2 1555 aa25■■□□□ 1.59
C1orf43-203ENST00000368516 ZNF335Q9H4Z2 1342 aaPredicted RBP24.99■■□□□ 1.59
C1orf43-203ENST00000368516 THEMISQ8N1K5 641 aaPredicted RBP24.98■■□□□ 1.59
C1orf43-203ENST00000368516 RRP7BPQ9NSQ0 103 aa24.98■■□□□ 1.59
C1orf43-203ENST00000368516 NEURL4Q96JN8 1562 aa24.97■■□□□ 1.59
C1orf43-203ENST00000368516 ERVK-7P63135 1459 aa24.97■■□□□ 1.59
C1orf43-203ENST00000368516 ANKRD30AQ9BXX3 1397 aa24.95■■□□□ 1.59
C1orf43-203ENST00000368516 DEPDC5O75140 1603 aa24.95■■□□□ 1.58
C1orf43-203ENST00000368516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.94■■□□□ 1.58
C1orf43-203ENST00000368516 CFAP65Q6ZU64 1925 aaKnown RBP24.93■■□□□ 1.58
C1orf43-203ENST00000368516 ANKLE2Q86XL3 938 aa24.93■■□□□ 1.58
C1orf43-203ENST00000368516 ARHGAP31Q2M1Z3 1444 aa24.91■■□□□ 1.58
C1orf43-203ENST00000368516 CHIC2Q9UKJ5 165 aa24.9■■□□□ 1.58
C1orf43-203ENST00000368516 KANK1Q14678 1352 aa24.9■■□□□ 1.58
C1orf43-203ENST00000368516 MED14O60244 1454 aa24.89■■□□□ 1.57
C1orf43-203ENST00000368516 ADGRL2O95490 1459 aa24.88■■□□□ 1.57
C1orf43-203ENST00000368516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.87■■□□□ 1.57
C1orf43-203ENST00000368516 UBR1Q8IWV7 1749 aa24.86■■□□□ 1.57
C1orf43-203ENST00000368516 FAM50AQ14320 339 aaKnown RBP24.86■■□□□ 1.57
C1orf43-203ENST00000368516 NPHP4O75161 1426 aaPredicted RBP24.86■■□□□ 1.57
C1orf43-203ENST00000368516 IQGAP1P46940 1657 aa24.85■■□□□ 1.57
C1orf43-203ENST00000368516 CPS1P31327 1500 aa24.85■■□□□ 1.57
C1orf43-203ENST00000368516 LMTK2Q8IWU2 1503 aa24.84■■□□□ 1.57
C1orf43-203ENST00000368516 VWDEQ8N2E2 1590 aa24.84■■□□□ 1.57
C1orf43-203ENST00000368516 UBAP1LF5GYI3 381 aa24.81■■□□□ 1.56
C1orf43-203ENST00000368516 SLIT1O75093 1534 aa24.76■■□□□ 1.55
C1orf43-203ENST00000368516 EFCAB6Q5THR3 1501 aa24.76■■□□□ 1.55
C1orf43-203ENST00000368516 PIK3C2BO00750 1634 aa24.76■■□□□ 1.55
C1orf43-203ENST00000368516 ANKRD50Q9ULJ7 1429 aa24.76■■□□□ 1.55
C1orf43-203ENST00000368516 SCAF11Q99590 1463 aaKnown RBP24.76■■□□□ 1.55
C1orf43-203ENST00000368516 ARHGAP23Q9P227 1491 aa24.75■■□□□ 1.55
C1orf43-203ENST00000368516 KDM5AP29375 1690 aaKnown RBP24.75■■□□□ 1.55
C1orf43-203ENST00000368516 SYNMO15061 1565 aa24.71■■□□□ 1.55
C1orf43-203ENST00000368516 TXNDC2Q86VQ3 553 aa24.69■■□□□ 1.54
C1orf43-203ENST00000368516 STAG3Q9UJ98 1225 aa24.69■■□□□ 1.54
C1orf43-203ENST00000368516 EID1Q9Y6B2 187 aa24.69■■□□□ 1.54
C1orf43-203ENST00000368516 NOS1P29475 1434 aa24.69■■□□□ 1.54
C1orf43-203ENST00000368516 RPRD2Q5VT52 1461 aaKnown RBP24.68■■□□□ 1.54
C1orf43-203ENST00000368516 TMEM2Q9UHN6 1383 aa24.67■■□□□ 1.54
C1orf43-203ENST00000368516 STRCP1A6NGW2 1772 aa24.67■■□□□ 1.54
C1orf43-203ENST00000368516 TET3O43151 1660 aa24.67■■□□□ 1.54
C1orf43-203ENST00000368516 TOM1O60784 492 aa24.67■■□□□ 1.54
C1orf43-203ENST00000368516 LTKP29376 864 aa24.67■■□□□ 1.54
C1orf43-203ENST00000368516 ROCK1Q13464 1354 aa24.67■■□□□ 1.54
C1orf43-203ENST00000368516 IDI1Q13907 227 aa24.66■■□□□ 1.54
C1orf43-203ENST00000368516 UNC13BO14795 1591 aa24.66■■□□□ 1.54
C1orf43-203ENST00000368516 DISP3Q9P2K9 1392 aa24.66■■□□□ 1.54
C1orf43-203ENST00000368516 GCC2Q8IWJ2 1684 aa24.64■■□□□ 1.53
C1orf43-203ENST00000368516 ADGRB3O60242 1522 aa24.64■■□□□ 1.53
C1orf43-203ENST00000368516 LRRC7Q96NW7 1537 aa24.62■■□□□ 1.53
C1orf43-203ENST00000368516 SLC52A1Q9NWF4 448 aa24.62■■□□□ 1.53
C1orf43-203ENST00000368516 SCAF1Q9H7N4 1312 aaKnown RBP24.61■■□□□ 1.53
C1orf43-203ENST00000368516 PIP4K2BP78356 416 aa24.59■■□□□ 1.53
C1orf43-203ENST00000368516 IQGAP3Q86VI3 1631 aa24.57■■□□□ 1.52
C1orf43-203ENST00000368516 ALKQ9UM73 1620 aa24.55■■□□□ 1.52
C1orf43-203ENST00000368516 PPARGC1BQ86YN6 1023 aaKnown RBP24.55■■□□□ 1.52
C1orf43-203ENST00000368516 E9PCH4 1651 aa24.54■■□□□ 1.52
C1orf43-203ENST00000368516 ITGAEP38570 1179 aa24.53■■□□□ 1.52
C1orf43-203ENST00000368516 MYO5BQ9ULV0 1848 aa24.52■■□□□ 1.52
C1orf43-203ENST00000368516 HSPA1LP34931 641 aa24.51■■□□□ 1.51
C1orf43-203ENST00000368516 TMEM131LA2VDJ0 1609 aa24.5■■□□□ 1.51
C1orf43-203ENST00000368516 XIRP1Q702N8 1843 aaKnown RBP24.49■■□□□ 1.51
C1orf43-203ENST00000368516 NUP155O75694 1391 aa24.48■■□□□ 1.51
C1orf43-203ENST00000368516 ZFYVE9O95405 1425 aa24.47■■□□□ 1.51
C1orf43-203ENST00000368516 SLC26A8Q96RN1 970 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms