RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 RTL5Q5HYW3 569 aaPredicted RBP11.9□□□□□ -0.5
THBS3-201ENST00000368378 TROQ12816 1431 aaPredicted RBP11.9□□□□□ -0.5
THBS3-201ENST00000368378 PZPP20742 1482 aa11.9□□□□□ -0.5
THBS3-201ENST00000368378 PLEKHD1A6NEE1 506 aa11.9□□□□□ -0.5
THBS3-201ENST00000368378 ZBTB47Q9UFB7 747 aaPredicted RBP11.89□□□□□ -0.51
THBS3-201ENST00000368378 SPATA31E1Q6ZUB1 1445 aa11.89□□□□□ -0.51
THBS3-201ENST00000368378 KIF14Q15058 1648 aa11.89□□□□□ -0.51
THBS3-201ENST00000368378 SLC4A3P48751 1232 aa11.89□□□□□ -0.51
THBS3-201ENST00000368378 NUDCQ9Y266 331 aa11.89□□□□□ -0.51
THBS3-201ENST00000368378 GPATCH8Q9UKJ3 1502 aaKnown RBP11.88□□□□□ -0.51
THBS3-201ENST00000368378 ANKRD30AQ9BXX3 1397 aa11.88□□□□□ -0.51
THBS3-201ENST00000368378 TULP1O00294 542 aaPredicted RBP11.88□□□□□ -0.51
THBS3-201ENST00000368378 TSPY4P0CV99 314 aa11.88□□□□□ -0.51
THBS3-201ENST00000368378 TSPY10P0CW01 314 aa11.88□□□□□ -0.51
THBS3-201ENST00000368378 FANCIQ9NVI1 1328 aa11.88□□□□□ -0.51
THBS3-201ENST00000368378 NBPF1Q3BBV0 1214 aa11.87□□□□□ -0.51
THBS3-201ENST00000368378 KIAA1107Q9UPP5 1409 aa11.87□□□□□ -0.51
THBS3-201ENST00000368378 ANKRD50Q9ULJ7 1429 aa11.87□□□□□ -0.51
THBS3-201ENST00000368378 BCORL1Q5H9F3 1711 aa11.84□□□□□ -0.51
THBS3-201ENST00000368378 DHX29Q7Z478 1369 aaKnown RBP11.84□□□□□ -0.51
THBS3-201ENST00000368378 ERICH6BQ5W0A0 696 aa11.82□□□□□ -0.52
THBS3-201ENST00000368378 PNISRQ8TF01 805 aaKnown RBP11.82□□□□□ -0.52
THBS3-201ENST00000368378 FAM69CQ0P6D2 419 aa11.82□□□□□ -0.52
THBS3-201ENST00000368378 RCAN3Q9UKA8 241 aa11.81□□□□□ -0.52
THBS3-201ENST00000368378 ITSN2Q9NZM3 1697 aa11.81□□□□□ -0.52
THBS3-201ENST00000368378 RIMBP3CA6NJZ7 1639 aa11.81□□□□□ -0.52
THBS3-201ENST00000368378 RIMBP3BA6NNM3 1639 aa11.81□□□□□ -0.52
THBS3-201ENST00000368378 RIMBP3Q9UFD9 1639 aa11.81□□□□□ -0.52
THBS3-201ENST00000368378 RGS3P49796 1198 aa11.81□□□□□ -0.52
THBS3-201ENST00000368378 C9orf84Q5VXU9 1444 aa11.81□□□□□ -0.52
THBS3-201ENST00000368378 ROCK2O75116 1388 aaKnown RBP11.8□□□□□ -0.52
THBS3-201ENST00000368378 TNNT2P45379 298 aaPredicted RBP11.8□□□□□ -0.52
THBS3-201ENST00000368378 CLASP1Q7Z460 1538 aa11.8□□□□□ -0.52
THBS3-201ENST00000368378 CCDC146Q8IYE0 955 aa11.8□□□□□ -0.52
THBS3-201ENST00000368378 KIF15Q9NS87 1388 aa11.79□□□□□ -0.52
THBS3-201ENST00000368378 ADGBQ8N7X0 1667 aa11.79□□□□□ -0.52
THBS3-201ENST00000368378 NEUROD2Q15784 382 aa11.79□□□□□ -0.52
THBS3-201ENST00000368378 PKNOX2Q96KN3 472 aa11.79□□□□□ -0.52
THBS3-201ENST00000368378 NEFMP07197 916 aa11.78□□□□□ -0.52
THBS3-201ENST00000368378 POLR1AO95602 1720 aaPredicted RBP11.78□□□□□ -0.52
THBS3-201ENST00000368378 MBD5Q9P267 1494 aa11.78□□□□□ -0.52
THBS3-201ENST00000368378 C20orf194Q5TEA3 1177 aa11.77□□□□□ -0.52
THBS3-201ENST00000368378 IPO9Q96P70 1041 aaKnown RBP11.77□□□□□ -0.52
THBS3-201ENST00000368378 PANK3Q9H999 370 aa11.77□□□□□ -0.53
THBS3-201ENST00000368378 RRP1P56182 461 aaKnown RBP11.77□□□□□ -0.53
THBS3-201ENST00000368378 SMG6Q86US8 1419 aaKnown RBP11.77□□□□□ -0.53
THBS3-201ENST00000368378 KDM5CP41229 1560 aa11.76□□□□□ -0.53
THBS3-201ENST00000368378 ATP10BO94823 1461 aa11.76□□□□□ -0.53
THBS3-201ENST00000368378 CRBNQ96SW2 442 aa11.76□□□□□ -0.53
THBS3-201ENST00000368378 ADGRL2O95490 1459 aa11.76□□□□□ -0.53
THBS3-201ENST00000368378 IL27Q8NEV9 243 aa11.75□□□□□ -0.53
THBS3-201ENST00000368378 CDC42BPAQ5VT25 1732 aa11.75□□□□□ -0.53
THBS3-201ENST00000368378 ABCA8O94911 1581 aa11.75□□□□□ -0.53
THBS3-201ENST00000368378 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.75□□□□□ -0.53
THBS3-201ENST00000368378 CROCC2H7BZ55 1655 aa11.74□□□□□ -0.53
THBS3-201ENST00000368378 CHGAP10645 457 aaKnown RBP11.74□□□□□ -0.53
THBS3-201ENST00000368378 PDE4AP27815 886 aa11.74□□□□□ -0.53
THBS3-201ENST00000368378 PDIA4P13667 645 aaKnown RBP11.73□□□□□ -0.53
THBS3-201ENST00000368378 MYBBP1AQ9BQG0 1328 aaKnown RBP11.73□□□□□ -0.53
THBS3-201ENST00000368378 RALGAPBQ86X10 1494 aa11.73□□□□□ -0.53
THBS3-201ENST00000368378 ARID4BQ4LE39 1312 aaPredicted RBP11.72□□□□□ -0.53
THBS3-201ENST00000368378 SHROOM2Q13796 1616 aa11.71□□□□□ -0.53
THBS3-201ENST00000368378 CCDC144AA2RUR9 1427 aa11.71□□□□□ -0.53
THBS3-201ENST00000368378 ADCY10Q96PN6 1610 aa11.71□□□□□ -0.54
THBS3-201ENST00000368378 ADAMTS8Q9UP79 889 aa11.71□□□□□ -0.54
THBS3-201ENST00000368378 ABCC10Q5T3U5 1492 aa11.71□□□□□ -0.54
THBS3-201ENST00000368378 WDR43Q15061 677 aaKnown RBP eCLIP11.7□□□□□ -0.54
THBS3-201ENST00000368378 RALBP1Q15311 655 aa11.7□□□□□ -0.54
THBS3-201ENST00000368378 UHRF1BP1Q6BDS2 1440 aa11.7□□□□□ -0.54
THBS3-201ENST00000368378 NLRP13Q86W25 1043 aa11.69□□□□□ -0.54
THBS3-201ENST00000368378 KTN1Q86UP2 1357 aaKnown RBP11.69□□□□□ -0.54
THBS3-201ENST00000368378 NUTM2DQ5VT03 806 aaPredicted RBP11.68□□□□□ -0.54
THBS3-201ENST00000368378 CANXP27824 592 aaKnown RBP11.67□□□□□ -0.54
THBS3-201ENST00000368378 RRP7AQ9Y3A4 280 aaKnown RBP11.67□□□□□ -0.54
THBS3-201ENST00000368378 BRD4O60885 1362 aaPredicted RBP11.67□□□□□ -0.54
THBS3-201ENST00000368378 FRAT1Q92837 279 aaPredicted RBP11.67□□□□□ -0.54
THBS3-201ENST00000368378 KNSTRNQ9Y448 316 aa11.67□□□□□ -0.54
THBS3-201ENST00000368378 ASXL2Q76L83 1435 aa11.67□□□□□ -0.54
THBS3-201ENST00000368378 FAM135AQ9P2D6 1515 aa11.67□□□□□ -0.54
THBS3-201ENST00000368378 BCL2L13Q9BXK5 485 aa11.66□□□□□ -0.54
THBS3-201ENST00000368378 RAPGEF3O95398 923 aa11.66□□□□□ -0.54
THBS3-201ENST00000368378 PDE4CQ08493 712 aa11.66□□□□□ -0.54
THBS3-201ENST00000368378 SPRYD3Q8NCJ5 442 aa11.66□□□□□ -0.54
THBS3-201ENST00000368378 SHANK2Q9UPX8 1470 aa11.66□□□□□ -0.54
THBS3-201ENST00000368378 RNF123Q5XPI4 1314 aa11.66□□□□□ -0.54
THBS3-201ENST00000368378 CCDC141Q6ZP82 1450 aa11.66□□□□□ -0.54
THBS3-201ENST00000368378 ARHGEF12Q9NZN5 1544 aa11.65□□□□□ -0.54
THBS3-201ENST00000368378 ARHGAP5Q13017 1502 aa11.65□□□□□ -0.54
THBS3-201ENST00000368378 DISP3Q9P2K9 1392 aa11.64□□□□□ -0.55
THBS3-201ENST00000368378 SAFB2Q14151 953 aaKnown RBP eCLIP11.64□□□□□ -0.55
THBS3-201ENST00000368378 TSPOAP1O95153 1857 aa11.64□□□□□ -0.55
THBS3-201ENST00000368378 SYCP2Q9BX26 1530 aa11.64□□□□□ -0.55
THBS3-201ENST00000368378 LRPPRCP42704 1394 aaKnown RBP11.64□□□□□ -0.55
THBS3-201ENST00000368378 SAMD9LQ8IVG5 1584 aa11.64□□□□□ -0.55
THBS3-201ENST00000368378 PRAG1Q86YV5 1406 aa11.64□□□□□ -0.55
THBS3-201ENST00000368378 MLECQ14165 292 aa11.64□□□□□ -0.55
THBS3-201ENST00000368378 ABCC2Q92887 1545 aa11.64□□□□□ -0.55
THBS3-201ENST00000368378 AFAP1Q8N556 730 aa11.63□□□□□ -0.55
THBS3-201ENST00000368378 PLEKHH2Q8IVE3 1493 aa11.63□□□□□ -0.55
THBS3-201ENST00000368378 APAF1O14727 1248 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms