RNA–Protein interactions for RNA: ENST00000367818.3

XCL1-201, Transcript of X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCL1, Length 1,367 nt, Biotype protein coding, Subcellular localisation Dendrite .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1-201ENST00000367818 NCKAP5LQ9HCH0 1330 aa11.12□□□□□ -0.63
XCL1-201ENST00000367818 NRG2O14511 850 aaPredicted RBP11.11□□□□□ -0.63
XCL1-201ENST00000367818 KIAA1468Q9P260 1216 aa11.11□□□□□ -0.63
XCL1-201ENST00000367818 PDE4AP27815 886 aa11.09□□□□□ -0.63
XCL1-201ENST00000367818 MAP3K9P80192 1104 aa11.09□□□□□ -0.63
XCL1-201ENST00000367818 FBXW7Q969H0 707 aa11.09□□□□□ -0.63
XCL1-201ENST00000367818 RYDENQ9NUL5 291 aaKnown RBP11.08□□□□□ -0.64
XCL1-201ENST00000367818 SEPT9Q9UHD8 586 aaPredicted RBP11.08□□□□□ -0.64
XCL1-201ENST00000367818 TSR3Q9UJK0 312 aaKnown RBP11.08□□□□□ -0.64
XCL1-201ENST00000367818 ONECUT3O60422 494 aaPredicted RBP11.07□□□□□ -0.64
XCL1-201ENST00000367818 TYW1BQ6NUM6 668 aa11.07□□□□□ -0.64
XCL1-201ENST00000367818 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.06□□□□□ -0.64
XCL1-201ENST00000367818 HPS5Q9UPZ3 1129 aa11.06□□□□□ -0.64
XCL1-201ENST00000367818 FAM98CQ17RN3 349 aaKnown RBP11.05□□□□□ -0.64
XCL1-201ENST00000367818 LRCH3Q96II8 777 aa11.05□□□□□ -0.64
XCL1-201ENST00000367818 PRKD2Q9BZL6 878 aa11.05□□□□□ -0.64
XCL1-201ENST00000367818 PHF14O94880 888 aa11.04□□□□□ -0.64
XCL1-201ENST00000367818 DDX27Q96GQ7 796 aaKnown RBP11.03□□□□□ -0.64
XCL1-201ENST00000367818 NKX1-1Q15270 411 aaPredicted RBP11.03□□□□□ -0.64
XCL1-201ENST00000367818 CHGAP10645 457 aaKnown RBP11.02□□□□□ -0.65
XCL1-201ENST00000367818 ZNF787Q6DD87 383 aa11.02□□□□□ -0.65
XCL1-201ENST00000367818 DNAJC5Q9H3Z4 198 aa11.02□□□□□ -0.65
XCL1-201ENST00000367818 TRIM6-TRIM34B2RNG4 842 aa11.01□□□□□ -0.65
XCL1-201ENST00000367818 LARP6Q9BRS8 491 aaKnown RBP11□□□□□ -0.65
XCL1-201ENST00000367818 EMILIN3Q9NT22 766 aa11□□□□□ -0.65
XCL1-201ENST00000367818 V9GY48 417 aaPredicted RBP11□□□□□ -0.65
XCL1-201ENST00000367818 MFSD10Q14728 455 aa10.98□□□□□ -0.65
XCL1-201ENST00000367818 C6orf132Q5T0Z8 1188 aa10.96□□□□□ -0.65
XCL1-201ENST00000367818 TJAP1Q5JTD0 557 aa10.95□□□□□ -0.66
XCL1-201ENST00000367818 ZNF775Q96BV0 537 aaPredicted RBP10.95□□□□□ -0.66
XCL1-201ENST00000367818 EPAS1Q99814 870 aa10.94□□□□□ -0.66
XCL1-201ENST00000367818 PPP4CP60510 307 aa10.92□□□□□ -0.66
XCL1-201ENST00000367818 PPP1R18Q6NYC8 613 aa10.92□□□□□ -0.66
XCL1-201ENST00000367818 PDZRN3Q9UPQ7 1066 aa10.91□□□□□ -0.66
XCL1-201ENST00000367818 MTRQ99707 1265 aa10.9□□□□□ -0.66
XCL1-201ENST00000367818 IL21Q9HBE4 155 aa10.9□□□□□ -0.66
XCL1-201ENST00000367818 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.88□□□□□ -0.67
XCL1-201ENST00000367818 PACS2Q86VP3 889 aa10.86□□□□□ -0.67
XCL1-201ENST00000367818 RBM33Q96EV2 1170 aaKnown RBP10.85□□□□□ -0.67
XCL1-201ENST00000367818 TSKSQ9UJT2 592 aa10.84□□□□□ -0.67
XCL1-201ENST00000367818 SAMD7Q7Z3H4 446 aa10.83□□□□□ -0.68
XCL1-201ENST00000367818 ZNF516Q92618 1163 aa10.8□□□□□ -0.68
XCL1-201ENST00000367818 GTPBP6O43824 516 aaPredicted RBP10.78□□□□□ -0.68
XCL1-201ENST00000367818 DPYSL4O14531 572 aa10.77□□□□□ -0.68
XCL1-201ENST00000367818 GGCXP38435 758 aa10.77□□□□□ -0.68
XCL1-201ENST00000367818 EN1Q05925 392 aaPredicted RBP10.77□□□□□ -0.69
XCL1-201ENST00000367818 SMAPO00193 183 aa10.76□□□□□ -0.69
XCL1-201ENST00000367818 TSR1Q2NL82 804 aaKnown RBP10.76□□□□□ -0.69
XCL1-201ENST00000367818 DDX12PQ92771 950 aa10.76□□□□□ -0.69
XCL1-201ENST00000367818 MAP3K7O43318 606 aa10.75□□□□□ -0.69
XCL1-201ENST00000367818 CAMK2BQ13554 666 aa10.75□□□□□ -0.69
XCL1-201ENST00000367818 NKX2-3Q8TAU0 364 aa10.74□□□□□ -0.69
XCL1-201ENST00000367818 APLP1P51693 650 aa10.73□□□□□ -0.69
XCL1-201ENST00000367818 NBR1Q14596 966 aa10.73□□□□□ -0.69
XCL1-201ENST00000367818 RNF40O75150 1001 aa10.72□□□□□ -0.69
XCL1-201ENST00000367818 TRIM67Q6ZTA4 783 aa10.72□□□□□ -0.69
XCL1-201ENST00000367818 CDCA7LQ96GN5 454 aa10.72□□□□□ -0.69
XCL1-201ENST00000367818 NBPF26B4DH59 902 aa10.71□□□□□ -0.69
XCL1-201ENST00000367818 PKDCCQ504Y2 493 aa10.71□□□□□ -0.69
XCL1-201ENST00000367818 TMUB1Q9BVT8 246 aa10.71□□□□□ -0.69
XCL1-201ENST00000367818 PRSS12P56730 875 aa10.7□□□□□ -0.7
XCL1-201ENST00000367818 MYT1Q01538 1121 aa10.7□□□□□ -0.7
XCL1-201ENST00000367818 FAM198AQ9UFP1 575 aa10.7□□□□□ -0.7
XCL1-201ENST00000367818 DGAT1O75907 488 aa10.68□□□□□ -0.7
XCL1-201ENST00000367818 CADPS2Q86UW7 1296 aa10.68□□□□□ -0.7
XCL1-201ENST00000367818 TATDN2Q93075 761 aa10.68□□□□□ -0.7
XCL1-201ENST00000367818 PNMA3Q9UL41 463 aa10.68□□□□□ -0.7
XCL1-201ENST00000367818 POTECB2RU33 542 aa10.66□□□□□ -0.7
XCL1-201ENST00000367818 C3orf80F5H4A9 247 aa10.66□□□□□ -0.7
XCL1-201ENST00000367818 COPS2P61201 443 aa10.66□□□□□ -0.7
XCL1-201ENST00000367818 NECTIN2Q92692 538 aa10.66□□□□□ -0.7
XCL1-201ENST00000367818 CERKQ8TCT0 537 aa10.65□□□□□ -0.7
XCL1-201ENST00000367818 HDGFP51858 240 aaKnown RBP10.65□□□□□ -0.71
XCL1-201ENST00000367818 SLC19A1P41440 591 aa10.64□□□□□ -0.71
XCL1-201ENST00000367818 PRR20EP86478 221 aa10.64□□□□□ -0.71
XCL1-201ENST00000367818 PRR20CP86479 221 aa10.64□□□□□ -0.71
XCL1-201ENST00000367818 PRR20DP86480 221 aa10.64□□□□□ -0.71
XCL1-201ENST00000367818 PRR20BP86481 221 aa10.64□□□□□ -0.71
XCL1-201ENST00000367818 PRR20AP86496 221 aa10.64□□□□□ -0.71
XCL1-201ENST00000367818 TREML4Q6UXN2 200 aa10.64□□□□□ -0.71
XCL1-201ENST00000367818 LCE2AQ5TA79 106 aaPredicted RBP10.62□□□□□ -0.71
XCL1-201ENST00000367818 ZPR1O75312 459 aa10.61□□□□□ -0.71
XCL1-201ENST00000367818 PDIA6Q15084 440 aa10.61□□□□□ -0.71
XCL1-201ENST00000367818 EMID1Q96A84 441 aaPredicted RBP10.6□□□□□ -0.71
XCL1-201ENST00000367818 RNF223E7ERA6 249 aa10.59□□□□□ -0.71
XCL1-201ENST00000367818 SPRYD7Q5W111 196 aa10.59□□□□□ -0.71
XCL1-201ENST00000367818 NUDT18Q6ZVK8 323 aa10.59□□□□□ -0.71
XCL1-201ENST00000367818 FAM187AA6NFU0 413 aa10.58□□□□□ -0.72
XCL1-201ENST00000367818 ZNF598Q86UK7 904 aaKnown RBP10.58□□□□□ -0.72
XCL1-201ENST00000367818 SLF2Q8IX21 1173 aa10.58□□□□□ -0.72
XCL1-201ENST00000367818 RBM27Q9P2N5 1060 aaKnown RBP10.57□□□□□ -0.72
XCL1-201ENST00000367818 SWT1Q5T5J6 900 aaKnown RBP10.55□□□□□ -0.72
XCL1-201ENST00000367818 SPDYE16A6NNV3 312 aaPredicted RBP10.54□□□□□ -0.72
XCL1-201ENST00000367818 PRIM1P49642 420 aaKnown RBP10.53□□□□□ -0.72
XCL1-201ENST00000367818 ZNF697Q5TEC3 545 aa10.53□□□□□ -0.72
XCL1-201ENST00000367818 ANKLE1Q8NAG6 615 aa10.53□□□□□ -0.72
XCL1-201ENST00000367818 PRR14Q9BWN1 585 aa10.53□□□□□ -0.72
XCL1-201ENST00000367818 ST8SIA5O15466 376 aa10.52□□□□□ -0.72
XCL1-201ENST00000367818 PCDHB3Q9Y5E6 796 aa10.52□□□□□ -0.72
XCL1-201ENST00000367818 TNFRSF10AO00220 468 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms