RNA–Protein interactions for RNA: ENST00000367364.5

PTPRC-202, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-202ENST00000367364 ANKK1Q8NFD2 765 aa14.41□□□□□ -0.1
PTPRC-202ENST00000367364 PHF14O94880 888 aa14.4□□□□□ -0.1
PTPRC-202ENST00000367364 BCAMP50895 628 aa14.4□□□□□ -0.1
PTPRC-202ENST00000367364 TYW1BQ6NUM6 668 aa14.4□□□□□ -0.1
PTPRC-202ENST00000367364 FBXW7Q969H0 707 aa14.38□□□□□ -0.11
PTPRC-202ENST00000367364 SOWAHBA6NEL2 793 aa14.36□□□□□ -0.11
PTPRC-202ENST00000367364 LAPTM4BQ86VI4 370 aa14.36□□□□□ -0.11
PTPRC-202ENST00000367364 KIAA1468Q9P260 1216 aa14.35□□□□□ -0.11
PTPRC-202ENST00000367364 ZFRQ96KR1 1074 aaKnown RBP14.33□□□□□ -0.12
PTPRC-202ENST00000367364 CAMK2BQ13554 666 aa14.3□□□□□ -0.12
PTPRC-202ENST00000367364 C6orf132Q5T0Z8 1188 aa14.3□□□□□ -0.12
PTPRC-202ENST00000367364 WBP1LQ9NX94 342 aa14.3□□□□□ -0.12
PTPRC-202ENST00000367364 SEPT9Q9UHD8 586 aaPredicted RBP14.3□□□□□ -0.12
PTPRC-202ENST00000367364 ONECUT3O60422 494 aaPredicted RBP14.29□□□□□ -0.12
PTPRC-202ENST00000367364 EPAS1Q99814 870 aa14.27□□□□□ -0.13
PTPRC-202ENST00000367364 DPYSL4O14531 572 aa14.26□□□□□ -0.13
PTPRC-202ENST00000367364 NYAP1Q6ZVC0 841 aa14.26□□□□□ -0.13
PTPRC-202ENST00000367364 TRIM6-TRIM34B2RNG4 842 aa14.25□□□□□ -0.13
PTPRC-202ENST00000367364 FAM98CQ17RN3 349 aaKnown RBP14.21□□□□□ -0.13
PTPRC-202ENST00000367364 RBM33Q96EV2 1170 aaKnown RBP14.21□□□□□ -0.13
PTPRC-202ENST00000367364 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
PTPRC-202ENST00000367364 KCNC4Q03721 635 aa14.2□□□□□ -0.14
PTPRC-202ENST00000367364 DDX12PQ92771 950 aa14.18□□□□□ -0.14
PTPRC-202ENST00000367364 TSR3Q9UJK0 312 aaKnown RBP14.17□□□□□ -0.14
PTPRC-202ENST00000367364 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.16□□□□□ -0.14
PTPRC-202ENST00000367364 HPS5Q9UPZ3 1129 aa14.16□□□□□ -0.14
PTPRC-202ENST00000367364 LRCH3Q96II8 777 aa14.14□□□□□ -0.15
PTPRC-202ENST00000367364 TSKSQ9UJT2 592 aa14.14□□□□□ -0.15
PTPRC-202ENST00000367364 Q6ZNB5 142 aa14.13□□□□□ -0.15
PTPRC-202ENST00000367364 EN1Q05925 392 aaPredicted RBP14.12□□□□□ -0.15
PTPRC-202ENST00000367364 TSR1Q2NL82 804 aaKnown RBP14.12□□□□□ -0.15
PTPRC-202ENST00000367364 NBR1Q14596 966 aa14.09□□□□□ -0.15
PTPRC-202ENST00000367364 LCE2BO14633 110 aa14.06□□□□□ -0.16
PTPRC-202ENST00000367364 MAP3K7O43318 606 aa14.06□□□□□ -0.16
PTPRC-202ENST00000367364 PDIA6Q15084 440 aa14.06□□□□□ -0.16
PTPRC-202ENST00000367364 PACS2Q86VP3 889 aa14.05□□□□□ -0.16
PTPRC-202ENST00000367364 FAM198AQ9UFP1 575 aa14.04□□□□□ -0.16
PTPRC-202ENST00000367364 C3orf80F5H4A9 247 aa14.02□□□□□ -0.17
PTPRC-202ENST00000367364 SMAPO00193 183 aa14.02□□□□□ -0.17
PTPRC-202ENST00000367364 PRIM1P49642 420 aaKnown RBP14.02□□□□□ -0.17
PTPRC-202ENST00000367364 TJAP1Q5JTD0 557 aa14.02□□□□□ -0.17
PTPRC-202ENST00000367364 PPP4CP60510 307 aa14.01□□□□□ -0.17
PTPRC-202ENST00000367364 SAMD7Q7Z3H4 446 aa14.01□□□□□ -0.17
PTPRC-202ENST00000367364 CDCA7LQ96GN5 454 aa14□□□□□ -0.17
PTPRC-202ENST00000367364 PRSS12P56730 875 aa13.97□□□□□ -0.17
PTPRC-202ENST00000367364 LAPTM4AQ15012 233 aa13.97□□□□□ -0.17
PTPRC-202ENST00000367364 SPDYE16A6NNV3 312 aaPredicted RBP13.96□□□□□ -0.17
PTPRC-202ENST00000367364 GFRA3O60609 400 aa13.94□□□□□ -0.18
PTPRC-202ENST00000367364 MTRQ99707 1265 aa13.94□□□□□ -0.18
PTPRC-202ENST00000367364 TATDN2Q93075 761 aa13.92□□□□□ -0.18
PTPRC-202ENST00000367364 PRKD2Q9BZL6 878 aa13.92□□□□□ -0.18
PTPRC-202ENST00000367364 PPP1R18Q6NYC8 613 aa13.9□□□□□ -0.18
PTPRC-202ENST00000367364 CERKQ8TCT0 537 aa13.9□□□□□ -0.18
PTPRC-202ENST00000367364 BBXQ8WY36 941 aaPredicted RBP13.9□□□□□ -0.18
PTPRC-202ENST00000367364 IL21Q9HBE4 155 aa13.9□□□□□ -0.18
PTPRC-202ENST00000367364 PNMA3Q9UL41 463 aa13.9□□□□□ -0.18
PTPRC-202ENST00000367364 TRAF7Q6Q0C0 670 aa13.89□□□□□ -0.19
PTPRC-202ENST00000367364 CDHR5Q9HBB8 845 aa13.89□□□□□ -0.19
PTPRC-202ENST00000367364 NBPF26B4DH59 902 aa13.88□□□□□ -0.19
PTPRC-202ENST00000367364 ZNF516Q92618 1163 aa13.88□□□□□ -0.19
PTPRC-202ENST00000367364 GRXCR2A6NFK2 248 aa13.87□□□□□ -0.19
PTPRC-202ENST00000367364 ARIH1Q9Y4X5 557 aaPredicted RBP13.86□□□□□ -0.19
PTPRC-202ENST00000367364 APLP1P51693 650 aa13.85□□□□□ -0.19
PTPRC-202ENST00000367364 E2F4Q16254 413 aa13.85□□□□□ -0.19
PTPRC-202ENST00000367364 NRG2O14511 850 aaPredicted RBP13.84□□□□□ -0.19
PTPRC-202ENST00000367364 OSBPP22059 807 aa13.84□□□□□ -0.19
PTPRC-202ENST00000367364 NUDT18Q6ZVK8 323 aa13.84□□□□□ -0.19
PTPRC-202ENST00000367364 V9GY48 417 aaPredicted RBP13.83□□□□□ -0.2
PTPRC-202ENST00000367364 RNF40O75150 1001 aa13.81□□□□□ -0.2
PTPRC-202ENST00000367364 NKX2-3Q8TAU0 364 aa13.81□□□□□ -0.2
PTPRC-202ENST00000367364 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.81□□□□□ -0.2
PTPRC-202ENST00000367364 RBM27Q9P2N5 1060 aaKnown RBP13.81□□□□□ -0.2
PTPRC-202ENST00000367364 TTC13Q8NBP0 860 aa13.78□□□□□ -0.2
PTPRC-202ENST00000367364 SPRYD3Q8NCJ5 442 aa13.76□□□□□ -0.21
PTPRC-202ENST00000367364 NPDC1Q9NQX5 325 aaPredicted RBP13.75□□□□□ -0.21
PTPRC-202ENST00000367364 SWT1Q5T5J6 900 aaKnown RBP13.74□□□□□ -0.21
PTPRC-202ENST00000367364 HDGFP51858 240 aaKnown RBP13.73□□□□□ -0.21
PTPRC-202ENST00000367364 PADI6Q6TGC4 694 aa13.73□□□□□ -0.21
PTPRC-202ENST00000367364 COPS2P61201 443 aa13.72□□□□□ -0.21
PTPRC-202ENST00000367364 PDZRN3Q9UPQ7 1066 aa13.7□□□□□ -0.22
PTPRC-202ENST00000367364 SLF2Q8IX21 1173 aa13.68□□□□□ -0.22
PTPRC-202ENST00000367364 WDR70Q9NW82 654 aa13.68□□□□□ -0.22
PTPRC-202ENST00000367364 NECTIN2Q92692 538 aa13.66□□□□□ -0.22
PTPRC-202ENST00000367364 EYA1Q99502 592 aa13.66□□□□□ -0.22
PTPRC-202ENST00000367364 ZPR1O75312 459 aa13.65□□□□□ -0.22
PTPRC-202ENST00000367364 GGCXP38435 758 aa13.64□□□□□ -0.23
PTPRC-202ENST00000367364 TMUB1Q9BVT8 246 aa13.64□□□□□ -0.23
PTPRC-202ENST00000367364 ZNF787Q6DD87 383 aa13.62□□□□□ -0.23
PTPRC-202ENST00000367364 EMID1Q96A84 441 aaPredicted RBP13.62□□□□□ -0.23
PTPRC-202ENST00000367364 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.62□□□□□ -0.23
PTPRC-202ENST00000367364 TRIM67Q6ZTA4 783 aa13.61□□□□□ -0.23
PTPRC-202ENST00000367364 PAXIP1Q6ZW49 1069 aaPredicted RBP13.58□□□□□ -0.24
PTPRC-202ENST00000367364 CFAP44Q96MT7 982 aa13.58□□□□□ -0.24
PTPRC-202ENST00000367364 RNF223E7ERA6 249 aa13.57□□□□□ -0.24
PTPRC-202ENST00000367364 BLOC1S3Q6QNY0 202 aa13.57□□□□□ -0.24
PTPRC-202ENST00000367364 PCDHB3Q9Y5E6 796 aa13.57□□□□□ -0.24
PTPRC-202ENST00000367364 TLL1O43897 1013 aa13.54□□□□□ -0.24
PTPRC-202ENST00000367364 PRR14Q9BWN1 585 aa13.54□□□□□ -0.24
PTPRC-202ENST00000367364 SLC19A1P41440 591 aa13.53□□□□□ -0.24
PTPRC-202ENST00000367364 MLLT3P42568 568 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms