RNA–Protein interactions for RNA: ENST00000367122.6

SYNJ2-204, Transcript of synaptojanin 2, human

TSL 1 (best) BASIC

Gene SYNJ2, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNJ2-204	ENST00000367122	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.27	□□□□□ -0.29
SYNJ2-204	ENST00000367122	PAK3	O75914	559 aa	Predicted RBP	13.26	□□□□□ -0.29
SYNJ2-204	ENST00000367122	IPO4	Q8TEX9	1081 aa	Known RBP	13.26	□□□□□ -0.29
SYNJ2-204	ENST00000367122	NBR1	Q14596	966 aa		13.25	□□□□□ -0.29
SYNJ2-204	ENST00000367122	TONSL	Q96HA7	1378 aa		13.25	□□□□□ -0.29
SYNJ2-204	ENST00000367122	B4GALNT3	Q6L9W6	998 aa		13.23	□□□□□ -0.29
SYNJ2-204	ENST00000367122	FAM50A	Q14320	339 aa	Known RBP	13.23	□□□□□ -0.29
SYNJ2-204	ENST00000367122	CLSTN1	O94985	981 aa		13.23	□□□□□ -0.29
SYNJ2-204	ENST00000367122	CHRM1	P11229	460 aa	Predicted RBP	13.23	□□□□□ -0.29
SYNJ2-204	ENST00000367122	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
SYNJ2-204	ENST00000367122	KIF14	Q15058	1648 aa		13.22	□□□□□ -0.29
SYNJ2-204	ENST00000367122	MYOM3	Q5VTT5	1437 aa		13.2	□□□□□ -0.3
SYNJ2-204	ENST00000367122	ASXL2	Q76L83	1435 aa		13.2	□□□□□ -0.3
SYNJ2-204	ENST00000367122	WDR7	Q9Y4E6	1490 aa		13.19	□□□□□ -0.3
SYNJ2-204	ENST00000367122	IPO9	Q96P70	1041 aa	Known RBP	13.18	□□□□□ -0.3
SYNJ2-204	ENST00000367122	DNAJC5	Q9H3Z4	198 aa		13.18	□□□□□ -0.3
SYNJ2-204	ENST00000367122	ZBED9	Q6R2W3	1325 aa		13.18	□□□□□ -0.3
SYNJ2-204	ENST00000367122	FGD6	Q6ZV73	1430 aa		13.18	□□□□□ -0.3
SYNJ2-204	ENST00000367122	BBX	Q8WY36	941 aa	Predicted RBP	13.18	□□□□□ -0.3
SYNJ2-204	ENST00000367122	ABCC10	Q5T3U5	1492 aa		13.17	□□□□□ -0.3
SYNJ2-204	ENST00000367122	RTL5	Q5HYW3	569 aa	Predicted RBP	13.17	□□□□□ -0.3
SYNJ2-204	ENST00000367122	WWC1	Q8IX03	1113 aa		13.17	□□□□□ -0.3
SYNJ2-204	ENST00000367122	PSMD1	Q99460	953 aa		13.17	□□□□□ -0.3
SYNJ2-204	ENST00000367122	WASHC2A	Q641Q2	1341 aa		13.17	□□□□□ -0.3
SYNJ2-204	ENST00000367122	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.16	□□□□□ -0.3
SYNJ2-204	ENST00000367122	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.15	□□□□□ -0.3
SYNJ2-204	ENST00000367122	ANP32A	P39687	249 aa	Known RBP	13.15	□□□□□ -0.3
SYNJ2-204	ENST00000367122	ARID3A	Q99856	593 aa		13.15	□□□□□ -0.3
SYNJ2-204	ENST00000367122	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
SYNJ2-204	ENST00000367122	CNTLN	Q9NXG0	1405 aa		13.15	□□□□□ -0.3
SYNJ2-204	ENST00000367122	CCDC184	Q52MB2	194 aa		13.15	□□□□□ -0.3
SYNJ2-204	ENST00000367122	MIA2	Q96PC5	1412 aa		13.14	□□□□□ -0.31
SYNJ2-204	ENST00000367122	CERS3	Q8IU89	383 aa		13.14	□□□□□ -0.31
SYNJ2-204	ENST00000367122	KCNG1	Q9UIX4	513 aa		13.14	□□□□□ -0.31
SYNJ2-204	ENST00000367122	NECTIN2	Q92692	538 aa		13.14	□□□□□ -0.31
SYNJ2-204	ENST00000367122	RNF216	Q9NWF9	866 aa	Predicted RBP	13.14	□□□□□ -0.31
SYNJ2-204	ENST00000367122	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.13	□□□□□ -0.31
SYNJ2-204	ENST00000367122	TTC37	Q6PGP7	1564 aa		13.13	□□□□□ -0.31
SYNJ2-204	ENST00000367122	FTSJ3	Q8IY81	847 aa	Known RBP	13.13	□□□□□ -0.31
SYNJ2-204	ENST00000367122	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.13	□□□□□ -0.31
SYNJ2-204	ENST00000367122	CWC22	Q9HCG8	908 aa	Known RBP	13.12	□□□□□ -0.31
SYNJ2-204	ENST00000367122	ZNF644	Q9H582	1327 aa	Predicted RBP	13.12	□□□□□ -0.31
SYNJ2-204	ENST00000367122	PTPN23	Q9H3S7	1636 aa		13.12	□□□□□ -0.31
SYNJ2-204	ENST00000367122	IL27	Q8NEV9	243 aa		13.12	□□□□□ -0.31
SYNJ2-204	ENST00000367122	ZNF692	Q9BU19	519 aa	Predicted RBP	13.12	□□□□□ -0.31
SYNJ2-204	ENST00000367122	CDC42BPA	Q5VT25	1732 aa		13.12	□□□□□ -0.31
SYNJ2-204	ENST00000367122	HSPA5	P11021	654 aa	Known RBP	13.11	□□□□□ -0.31
SYNJ2-204	ENST00000367122	ITSN2	Q9NZM3	1697 aa		13.11	□□□□□ -0.31
SYNJ2-204	ENST00000367122	HFM1	A2PYH4	1435 aa		13.11	□□□□□ -0.31
SYNJ2-204	ENST00000367122	ZNF526	Q8TF50	670 aa	Predicted RBP	13.1	□□□□□ -0.31
SYNJ2-204	ENST00000367122	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.1	□□□□□ -0.31
SYNJ2-204	ENST00000367122	TCOF1	Q13428	1488 aa	Known RBP	13.1	□□□□□ -0.31
SYNJ2-204	ENST00000367122	SMG6	Q86US8	1419 aa	Known RBP	13.09	□□□□□ -0.31
SYNJ2-204	ENST00000367122	RNF123	Q5XPI4	1314 aa		13.09	□□□□□ -0.31
SYNJ2-204	ENST00000367122	PRDM16	Q9HAZ2	1276 aa		13.09	□□□□□ -0.31
SYNJ2-204	ENST00000367122	FAM9B	Q8IZU0	186 aa		13.08	□□□□□ -0.32
SYNJ2-204	ENST00000367122	PLCD4	Q9BRC7	762 aa		13.08	□□□□□ -0.32
SYNJ2-204	ENST00000367122	PLCH2	O75038	1416 aa		13.08	□□□□□ -0.32
SYNJ2-204	ENST00000367122	CDC42BPB	Q9Y5S2	1711 aa		13.08	□□□□□ -0.32
SYNJ2-204	ENST00000367122	ZBTB22	O15209	634 aa		13.07	□□□□□ -0.32
SYNJ2-204	ENST00000367122	ZNF428	Q96B54	188 aa		13.07	□□□□□ -0.32
SYNJ2-204	ENST00000367122	PREX2	Q70Z35	1606 aa		13.07	□□□□□ -0.32
SYNJ2-204	ENST00000367122	ABCA9	Q8IUA7	1624 aa		13.07	□□□□□ -0.32
SYNJ2-204	ENST00000367122	MRS2	Q9HD23	443 aa		13.07	□□□□□ -0.32
SYNJ2-204	ENST00000367122	MYO5C	Q9NQX4	1742 aa		13.07	□□□□□ -0.32
SYNJ2-204	ENST00000367122	ARHGAP5	Q13017	1502 aa		13.07	□□□□□ -0.32
SYNJ2-204	ENST00000367122	GTF2E1	P29083	439 aa	Predicted RBP	13.07	□□□□□ -0.32
SYNJ2-204	ENST00000367122	EFCAB2	Q5VUJ9	269 aa		13.06	□□□□□ -0.32
SYNJ2-204	ENST00000367122	CAMSAP2	Q08AD1	1489 aa		13.06	□□□□□ -0.32
SYNJ2-204	ENST00000367122	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.06	□□□□□ -0.32
SYNJ2-204	ENST00000367122	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.05	□□□□□ -0.32
SYNJ2-204	ENST00000367122	NCOA1	Q15788	1441 aa		13.05	□□□□□ -0.32
SYNJ2-204	ENST00000367122	USP35	Q9P2H5	1018 aa		13.05	□□□□□ -0.32
SYNJ2-204	ENST00000367122	PTPRK	Q15262	1439 aa		13.05	□□□□□ -0.32
SYNJ2-204	ENST00000367122	C11orf95	C9JLR9	678 aa	Predicted RBP	13.05	□□□□□ -0.32
SYNJ2-204	ENST00000367122	FAM69C	Q0P6D2	419 aa		13.05	□□□□□ -0.32
SYNJ2-204	ENST00000367122	CD109	Q6YHK3	1445 aa		13.04	□□□□□ -0.32
SYNJ2-204	ENST00000367122	AKNA	Q7Z591	1439 aa		13.04	□□□□□ -0.32
SYNJ2-204	ENST00000367122	CCDC7	Q96M83	1385 aa		13.04	□□□□□ -0.32
SYNJ2-204	ENST00000367122	NAIP	Q13075	1403 aa		13.04	□□□□□ -0.32
SYNJ2-204	ENST00000367122	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.04	□□□□□ -0.32
SYNJ2-204	ENST00000367122	WASHC2C	Q9Y4E1	1318 aa		13.03	□□□□□ -0.32
SYNJ2-204	ENST00000367122	SAMD9L	Q8IVG5	1584 aa		13.02	□□□□□ -0.32
SYNJ2-204	ENST00000367122	ARAP3	Q8WWN8	1544 aa		13.02	□□□□□ -0.33
SYNJ2-204	ENST00000367122	CHIC2	Q9UKJ5	165 aa		13.02	□□□□□ -0.33
SYNJ2-204	ENST00000367122	NUDC	Q9Y266	331 aa		13.02	□□□□□ -0.33
SYNJ2-204	ENST00000367122	ABCC5	O15440	1437 aa		13.01	□□□□□ -0.33
SYNJ2-204	ENST00000367122	ZBTB7C	A1YPR0	619 aa		13.01	□□□□□ -0.33
SYNJ2-204	ENST00000367122	DAPK1	P53355	1430 aa		13.01	□□□□□ -0.33
SYNJ2-204	ENST00000367122	GLI2	P10070	1586 aa		13.01	□□□□□ -0.33
SYNJ2-204	ENST00000367122	DIP2B	Q9P265	1576 aa		13	□□□□□ -0.33
SYNJ2-204	ENST00000367122	FANCA	O15360	1455 aa		13	□□□□□ -0.33
SYNJ2-204	ENST00000367122	GRIPAP1	Q4V328	841 aa		13	□□□□□ -0.33
SYNJ2-204	ENST00000367122	CANX	P27824	592 aa	Known RBP	13	□□□□□ -0.33
SYNJ2-204	ENST00000367122	TRH	P20396	242 aa	Predicted RBP	12.99	□□□□□ -0.33
SYNJ2-204	ENST00000367122	DNMT1	P26358	1616 aa	Known RBP	12.99	□□□□□ -0.33
SYNJ2-204	ENST00000367122	MBD5	Q9P267	1494 aa		12.99	□□□□□ -0.33
SYNJ2-204	ENST00000367122	POLR1A	O95602	1720 aa	Predicted RBP	12.99	□□□□□ -0.33
SYNJ2-204	ENST00000367122	PLEKHH2	Q8IVE3	1493 aa		12.99	□□□□□ -0.33
SYNJ2-204	ENST00000367122	KIAA1107	Q9UPP5	1409 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms