RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 PLEKHD1A6NEE1 506 aa10.82□□□□□ -0.68
CD46-208ENST00000367042 SLC4A3P48751 1232 aa10.82□□□□□ -0.68
CD46-208ENST00000367042 IL27Q8NEV9 243 aa10.81□□□□□ -0.68
CD46-208ENST00000367042 SHROOM2Q13796 1616 aa10.81□□□□□ -0.68
CD46-208ENST00000367042 KIAA1107Q9UPP5 1409 aa10.81□□□□□ -0.68
CD46-208ENST00000367042 HNRNPMP52272 730 aaKnown RBP eCLIP10.81□□□□□ -0.689e-8■■■■■ 28.4
CD46-208ENST00000367042 NLRP13Q86W25 1043 aa10.81□□□□□ -0.68
CD46-208ENST00000367042 KTN1Q86UP2 1357 aaKnown RBP10.81□□□□□ -0.68
CD46-208ENST00000367042 CRBNQ96SW2 442 aa10.79□□□□□ -0.68
CD46-208ENST00000367042 TROQ12816 1431 aaPredicted RBP10.79□□□□□ -0.68
CD46-208ENST00000367042 ANKRD50Q9ULJ7 1429 aa10.79□□□□□ -0.68
CD46-208ENST00000367042 KIF14Q15058 1648 aa10.79□□□□□ -0.68
CD46-208ENST00000367042 RGS3P49796 1198 aa10.78□□□□□ -0.68
CD46-208ENST00000367042 RNF123Q5XPI4 1314 aa10.78□□□□□ -0.68
CD46-208ENST00000367042 NBPF1Q3BBV0 1214 aa10.78□□□□□ -0.68
CD46-208ENST00000367042 DNMT1P26358 1616 aaKnown RBP10.77□□□□□ -0.68
CD46-208ENST00000367042 BRD4O60885 1362 aaPredicted RBP10.77□□□□□ -0.68
CD46-208ENST00000367042 PZPP20742 1482 aa10.77□□□□□ -0.68
CD46-208ENST00000367042 ARID4BQ4LE39 1312 aaPredicted RBP10.77□□□□□ -0.69
CD46-208ENST00000367042 BACH2Q9BYV9 841 aa10.77□□□□□ -0.69
CD46-208ENST00000367042 ANO8Q9HCE9 1232 aaPredicted RBP10.77□□□□□ -0.69
CD46-208ENST00000367042 ATP10BO94823 1461 aa10.77□□□□□ -0.69
CD46-208ENST00000367042 CAMSAP2Q08AD1 1489 aa10.77□□□□□ -0.69
CD46-208ENST00000367042 WDR43Q15061 677 aaKnown RBP eCLIP10.76□□□□□ -0.69
CD46-208ENST00000367042 PPM1GO15355 546 aaPredicted RBP10.76□□□□□ -0.69
CD46-208ENST00000367042 PANK3Q9H999 370 aa10.76□□□□□ -0.69
CD46-208ENST00000367042 ITSN2Q9NZM3 1697 aa10.75□□□□□ -0.69
CD46-208ENST00000367042 GPATCH8Q9UKJ3 1502 aaKnown RBP10.75□□□□□ -0.69
CD46-208ENST00000367042 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.75□□□□□ -0.69
CD46-208ENST00000367042 BCORL1Q5H9F3 1711 aa10.75□□□□□ -0.69
CD46-208ENST00000367042 PDE3BQ13370 1112 aa10.74□□□□□ -0.69
CD46-208ENST00000367042 DDRGK1Q96HY6 314 aa10.74□□□□□ -0.69
CD46-208ENST00000367042 C20orf194Q5TEA3 1177 aa10.74□□□□□ -0.69
CD46-208ENST00000367042 ABCC10Q5T3U5 1492 aa10.74□□□□□ -0.69
CD46-208ENST00000367042 ERCC6L2Q5T890 1561 aa10.73□□□□□ -0.69
CD46-208ENST00000367042 CDC42BPAQ5VT25 1732 aa10.73□□□□□ -0.69
CD46-208ENST00000367042 CLASP1Q7Z460 1538 aa10.72□□□□□ -0.69
CD46-208ENST00000367042 PTPRGP23470 1445 aa10.72□□□□□ -0.69
CD46-208ENST00000367042 KNSTRNQ9Y448 316 aa10.72□□□□□ -0.69
CD46-208ENST00000367042 CROCC2H7BZ55 1655 aa10.72□□□□□ -0.69
CD46-208ENST00000367042 MS4A1P11836 297 aa10.71□□□□□ -0.69
CD46-208ENST00000367042 TMF1P82094 1093 aa10.71□□□□□ -0.69
CD46-208ENST00000367042 EIF5BO60841 1220 aaKnown RBP10.71□□□□□ -0.7
CD46-208ENST00000367042 CANXP27824 592 aaKnown RBP10.71□□□□□ -0.7
CD46-208ENST00000367042 CCDC146Q8IYE0 955 aa10.71□□□□□ -0.7
CD46-208ENST00000367042 ADAMTS8Q9UP79 889 aa10.71□□□□□ -0.7
CD46-208ENST00000367042 LRPPRCP42704 1394 aaKnown RBP10.7□□□□□ -0.7
CD46-208ENST00000367042 CCDC144AA2RUR9 1427 aa10.7□□□□□ -0.7
CD46-208ENST00000367042 C9orf84Q5VXU9 1444 aa10.7□□□□□ -0.7
CD46-208ENST00000367042 ARXQ96QS3 562 aa10.69□□□□□ -0.7
CD46-208ENST00000367042 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.69□□□□□ -0.7
CD46-208ENST00000367042 USP35Q9P2H5 1018 aa10.69□□□□□ -0.7
CD46-208ENST00000367042 RALGAPBQ86X10 1494 aa10.69□□□□□ -0.7
CD46-208ENST00000367042 ADGBQ8N7X0 1667 aa10.69□□□□□ -0.7
CD46-208ENST00000367042 BRPF3Q9ULD4 1205 aa10.68□□□□□ -0.7
CD46-208ENST00000367042 KDM5CP41229 1560 aa10.68□□□□□ -0.7
CD46-208ENST00000367042 NFKBIBQ15653 356 aa10.68□□□□□ -0.7
CD46-208ENST00000367042 ADGRL2O95490 1459 aa10.67□□□□□ -0.7
CD46-208ENST00000367042 MBD5Q9P267 1494 aa10.67□□□□□ -0.7
CD46-208ENST00000367042 GSE1Q14687 1217 aa10.66□□□□□ -0.7
CD46-208ENST00000367042 NEUROD2Q15784 382 aa10.66□□□□□ -0.7
CD46-208ENST00000367042 CDC42BPBQ9Y5S2 1711 aa10.66□□□□□ -0.7
CD46-208ENST00000367042 ABCC2Q92887 1545 aa10.66□□□□□ -0.7
CD46-208ENST00000367042 GOLGA2Q08379 1002 aa10.65□□□□□ -0.7
CD46-208ENST00000367042 DISP3Q9P2K9 1392 aa10.65□□□□□ -0.7
CD46-208ENST00000367042 PER1O15534 1290 aaPredicted RBP10.65□□□□□ -0.7
CD46-208ENST00000367042 PARD3Q8TEW0 1356 aa10.64□□□□□ -0.71
CD46-208ENST00000367042 PREX2Q70Z35 1606 aa10.64□□□□□ -0.71
CD46-208ENST00000367042 CENPQQ7L2Z9 268 aaPredicted RBP10.64□□□□□ -0.71
CD46-208ENST00000367042 POLR1AO95602 1720 aaPredicted RBP10.64□□□□□ -0.71
CD46-208ENST00000367042 FAM161AQ3B820 660 aa10.64□□□□□ -0.71
CD46-208ENST00000367042 FRAT1Q92837 279 aaPredicted RBP10.64□□□□□ -0.71
CD46-208ENST00000367042 TNNT2P45379 298 aaPredicted RBP10.63□□□□□ -0.71
CD46-208ENST00000367042 UHRF1BP1Q6BDS2 1440 aa10.63□□□□□ -0.71
CD46-208ENST00000367042 SHANK2Q9UPX8 1470 aa10.63□□□□□ -0.71
CD46-208ENST00000367042 TTC37Q6PGP7 1564 aa10.62□□□□□ -0.71
CD46-208ENST00000367042 SAMD9LQ8IVG5 1584 aa10.62□□□□□ -0.71
CD46-208ENST00000367042 APAF1O14727 1248 aa10.62□□□□□ -0.71
CD46-208ENST00000367042 FRAT2O75474 233 aaPredicted RBP10.62□□□□□ -0.71
CD46-208ENST00000367042 SLKQ9H2G2 1235 aaPredicted RBP10.62□□□□□ -0.71
CD46-208ENST00000367042 ARHGEF5Q12774 1597 aa10.62□□□□□ -0.71
CD46-208ENST00000367042 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.61□□□□□ -0.711e-6■□□□□ 10.9
CD46-208ENST00000367042 PPP2R1AP30153 589 aa10.61□□□□□ -0.71
CD46-208ENST00000367042 UHRF1BP1LA0JNW5 1464 aa10.61□□□□□ -0.71
CD46-208ENST00000367042 BCAR3O75815 825 aa10.61□□□□□ -0.71
CD46-208ENST00000367042 ZCCHC11Q5TAX3 1644 aaKnown RBP10.6□□□□□ -0.71
CD46-208ENST00000367042 TESK2Q96S53 571 aa10.6□□□□□ -0.71
CD46-208ENST00000367042 ERBINQ96RT1 1412 aa10.6□□□□□ -0.71
CD46-208ENST00000367042 DUSP27Q5VZP5 1158 aa10.59□□□□□ -0.71
CD46-208ENST00000367042 PRAG1Q86YV5 1406 aa10.59□□□□□ -0.71
CD46-208ENST00000367042 PRKCSHP14314 528 aaPredicted RBP10.59□□□□□ -0.71
CD46-208ENST00000367042 SPRYD3Q8NCJ5 442 aa10.59□□□□□ -0.71
CD46-208ENST00000367042 ARHGEF12Q9NZN5 1544 aa10.58□□□□□ -0.72
CD46-208ENST00000367042 COG6Q9Y2V7 657 aa10.58□□□□□ -0.72
CD46-208ENST00000367042 PLEKHH1Q9ULM0 1364 aa10.57□□□□□ -0.72
CD46-208ENST00000367042 CHGAP10645 457 aaKnown RBP10.57□□□□□ -0.72
CD46-208ENST00000367042 MYO5CQ9NQX4 1742 aa10.57□□□□□ -0.72
CD46-208ENST00000367042 SENP3Q9H4L4 574 aaPredicted RBP10.57□□□□□ -0.72
CD46-208ENST00000367042 RRP7AQ9Y3A4 280 aaKnown RBP10.57□□□□□ -0.72
CD46-208ENST00000367042 WASHC2CQ9Y4E1 1318 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms