RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 DEPDC5O75140 1603 aa21.34■■□□□ 1.01
NEK2-201ENST00000366998 EIF2AK4Q9P2K8 1649 aaKnown RBP21.34■■□□□ 1.01
NEK2-201ENST00000366998 FAM69CQ0P6D2 419 aa21.32■■□□□ 1
NEK2-201ENST00000366998 DHX29Q7Z478 1369 aaKnown RBP21.32■■□□□ 1
NEK2-201ENST00000366998 TSPOAP1O95153 1857 aa21.31■■□□□ 1
NEK2-201ENST00000366998 MLH3Q9UHC1 1453 aa21.3■■□□□ 1
NEK2-201ENST00000366998 KIF3BO15066 747 aa21.28■■□□□ 1
NEK2-201ENST00000366998 RICTORQ6R327 1708 aa21.28■■□□□ 1
NEK2-201ENST00000366998 A2MP01023 1474 aa21.27■■□□□ 1
NEK2-201ENST00000366998 HIRIP3Q9BW71 556 aaPredicted RBP21.27■■□□□ 1
NEK2-201ENST00000366998 KANK1Q14678 1352 aa21.27■■□□□ 1
NEK2-201ENST00000366998 CCDC144AA2RUR9 1427 aa21.26■□□□□ 0.99
NEK2-201ENST00000366998 ABCA6Q8N139 1617 aa21.26■□□□□ 0.99
NEK2-201ENST00000366998 RAPGEF3O95398 923 aa21.26■□□□□ 0.99
NEK2-201ENST00000366998 E9PCH4 1651 aa21.25■□□□□ 0.99
NEK2-201ENST00000366998 NBPF8Q3BBV2 869 aa21.24■□□□□ 0.99
NEK2-201ENST00000366998 TET3O43151 1660 aa21.24■□□□□ 0.99
NEK2-201ENST00000366998 PRDM15P57071 1507 aaPredicted RBP21.24■□□□□ 0.99
NEK2-201ENST00000366998 MROH1Q8NDA8 1641 aa21.23■□□□□ 0.99
NEK2-201ENST00000366998 PLA2R1Q13018 1463 aa21.23■□□□□ 0.99
NEK2-201ENST00000366998 PPRC1Q5VV67 1664 aaKnown RBP21.23■□□□□ 0.99
NEK2-201ENST00000366998 VWDEQ8N2E2 1590 aa21.23■□□□□ 0.99
NEK2-201ENST00000366998 FRMPD1Q5SYB0 1578 aa21.21■□□□□ 0.99
NEK2-201ENST00000366998 RNF17Q9BXT8 1623 aaKnown RBP21.2■□□□□ 0.98
NEK2-201ENST00000366998 KIF13AQ9H1H9 1805 aa21.2■□□□□ 0.98
NEK2-201ENST00000366998 ZNF326Q5BKZ1 582 aaKnown RBP21.2■□□□□ 0.98
NEK2-201ENST00000366998 MIER1Q8N108 512 aa21.2■□□□□ 0.98
NEK2-201ENST00000366998 ATP10AO60312 1499 aa21.19■□□□□ 0.98
NEK2-201ENST00000366998 SPHKAPQ2M3C7 1700 aa21.19■□□□□ 0.98
NEK2-201ENST00000366998 DIP2CQ9Y2E4 1556 aa21.19■□□□□ 0.98
NEK2-201ENST00000366998 CEP152O94986 1710 aa21.17■□□□□ 0.98
NEK2-201ENST00000366998 HSPA5P11021 654 aaKnown RBP21.17■□□□□ 0.98
NEK2-201ENST00000366998 EIF4G2P78344 907 aaKnown RBP eCLIP21.17■□□□□ 0.98
NEK2-201ENST00000366998 BCORL1Q5H9F3 1711 aa21.16■□□□□ 0.98
NEK2-201ENST00000366998 TRPM2O94759 1503 aa21.14■□□□□ 0.98
NEK2-201ENST00000366998 DCAF11Q8TEB1 546 aa21.14■□□□□ 0.97
NEK2-201ENST00000366998 KDM2AQ9Y2K7 1162 aa21.14■□□□□ 0.97
NEK2-201ENST00000366998 UHRF1BP1Q6BDS2 1440 aa21.14■□□□□ 0.97
NEK2-201ENST00000366998 DDX10Q13206 875 aaKnown RBP21.12■□□□□ 0.97
NEK2-201ENST00000366998 RGL3Q3MIN7 710 aa21.12■□□□□ 0.97
NEK2-201ENST00000366998 EFCAB6Q5THR3 1501 aa21.12■□□□□ 0.97
NEK2-201ENST00000366998 ZMYM4Q5VZL5 1548 aa21.12■□□□□ 0.97
NEK2-201ENST00000366998 YEATS2Q9ULM3 1422 aa21.11■□□□□ 0.97
NEK2-201ENST00000366998 GGT6Q6P531 493 aa21.11■□□□□ 0.97
NEK2-201ENST00000366998 LMTK2Q8IWU2 1503 aa21.1■□□□□ 0.97
NEK2-201ENST00000366998 PTPRTO14522 1441 aa21.1■□□□□ 0.97
NEK2-201ENST00000366998 RALGAPBQ86X10 1494 aa21.1■□□□□ 0.97
NEK2-201ENST00000366998 CLTCL1P53675 1640 aa21.09■□□□□ 0.97
NEK2-201ENST00000366998 ABCC3O15438 1527 aa21.04■□□□□ 0.96
NEK2-201ENST00000366998 CFAP65Q6ZU64 1925 aaKnown RBP21.03■□□□□ 0.96
NEK2-201ENST00000366998 SPATA31E1Q6ZUB1 1445 aa21.03■□□□□ 0.96
NEK2-201ENST00000366998 PRAG1Q86YV5 1406 aa21.03■□□□□ 0.96
NEK2-201ENST00000366998 TRPM1Q7Z4N2 1603 aa21.03■□□□□ 0.96
NEK2-201ENST00000366998 WASHC2CQ9Y4E1 1318 aa21.02■□□□□ 0.96
NEK2-201ENST00000366998 USP47Q96K76 1375 aa21.02■□□□□ 0.96
NEK2-201ENST00000366998 CAMSAP1Q5T5Y3 1602 aa21.02■□□□□ 0.96
NEK2-201ENST00000366998 KIF1BO60333 1816 aa21.01■□□□□ 0.95
NEK2-201ENST00000366998 CARD11Q9BXL7 1154 aa21.01■□□□□ 0.95
NEK2-201ENST00000366998 POLR1AO95602 1720 aaPredicted RBP21■□□□□ 0.95
NEK2-201ENST00000366998 UGGT1Q9NYU2 1555 aa21■□□□□ 0.95
NEK2-201ENST00000366998 ZC3H13Q5T200 1668 aaKnown RBP20.99■□□□□ 0.95
NEK2-201ENST00000366998 WASHC2AQ641Q2 1341 aa20.99■□□□□ 0.95
NEK2-201ENST00000366998 ROCK2O75116 1388 aaKnown RBP20.98■□□□□ 0.95
NEK2-201ENST00000366998 NPATQ14207 1427 aa20.98■□□□□ 0.95
NEK2-201ENST00000366998 REREQ9P2R6 1566 aa20.95■□□□□ 0.94
NEK2-201ENST00000366998 COL17A1Q9UMD9 1497 aaPredicted RBP20.95■□□□□ 0.94
NEK2-201ENST00000366998 NEURL4Q96JN8 1562 aa20.95■□□□□ 0.94
NEK2-201ENST00000366998 CCDC7Q96M83 1385 aa20.94■□□□□ 0.94
NEK2-201ENST00000366998 MROH2AA6NES4 1674 aa20.93■□□□□ 0.94
NEK2-201ENST00000366998 C11orf95C9JLR9 678 aaPredicted RBP20.93■□□□□ 0.94
NEK2-201ENST00000366998 ARHGEF40Q8TER5 1519 aa20.93■□□□□ 0.94
NEK2-201ENST00000366998 MADDQ8WXG6 1647 aa20.93■□□□□ 0.94
NEK2-201ENST00000366998 SIGLEC1Q9BZZ2 1709 aa20.92■□□□□ 0.94
NEK2-201ENST00000366998 CNTLNQ9NXG0 1405 aa20.92■□□□□ 0.94
NEK2-201ENST00000366998 YTHDC1Q96MU7 727 aaKnown RBP20.92■□□□□ 0.94
NEK2-201ENST00000366998 LAMC1P11047 1609 aa20.91■□□□□ 0.94
NEK2-201ENST00000366998 AGLP35573 1532 aa20.9■□□□□ 0.94
NEK2-201ENST00000366998 NBPF1Q3BBV0 1214 aa20.89■□□□□ 0.93
NEK2-201ENST00000366998 KIF7Q2M1P5 1343 aa20.89■□□□□ 0.93
NEK2-201ENST00000366998 GPRASP1Q5JY77 1395 aa20.88■□□□□ 0.93
NEK2-201ENST00000366998 ANP32CO43423 234 aa20.88■□□□□ 0.93
NEK2-201ENST00000366998 IFT172Q9UG01 1749 aa20.88■□□□□ 0.93
NEK2-201ENST00000366998 ADGRB3O60242 1522 aa20.88■□□□□ 0.93
NEK2-201ENST00000366998 STAC3Q96MF2 364 aa20.88■□□□□ 0.93
NEK2-201ENST00000366998 ARHGAP31Q2M1Z3 1444 aa20.87■□□□□ 0.93
NEK2-201ENST00000366998 CHGAP10645 457 aaKnown RBP20.87■□□□□ 0.93
NEK2-201ENST00000366998 NOS1P29475 1434 aa20.86■□□□□ 0.93
NEK2-201ENST00000366998 SYNMO15061 1565 aa20.86■□□□□ 0.93
NEK2-201ENST00000366998 ST20-MTHFSA0A0A6YYL1 179 aa20.86■□□□□ 0.93
NEK2-201ENST00000366998 PREX1Q8TCU6 1659 aa20.84■□□□□ 0.93
NEK2-201ENST00000366998 PIK3C2BO00750 1634 aa20.83■□□□□ 0.93
NEK2-201ENST00000366998 MYOM2P54296 1465 aa20.83■□□□□ 0.93
NEK2-201ENST00000366998 CENPBP07199 599 aaPredicted RBP20.83■□□□□ 0.92
NEK2-201ENST00000366998 POLR3GLQ9BT43 218 aa20.83■□□□□ 0.92
NEK2-201ENST00000366998 CLTCQ00610 1675 aaKnown RBP20.82■□□□□ 0.92
NEK2-201ENST00000366998 KIAA1210Q9ULL0 1709 aa20.81■□□□□ 0.92
NEK2-201ENST00000366998 PPLO60437 1756 aa20.8■□□□□ 0.92
NEK2-201ENST00000366998 TRHP20396 242 aaPredicted RBP20.8■□□□□ 0.92
NEK2-201ENST00000366998 MLECQ14165 292 aa20.8■□□□□ 0.92
NEK2-201ENST00000366998 ARID4BQ4LE39 1312 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms