RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 GGT6Q6P531 493 aa23.7■■□□□ 1.38
PRKN-203ENST00000366894 ILDR2Q71H61 639 aa23.7■■□□□ 1.38
PRKN-203ENST00000366894 MROH2AA6NES4 1674 aa23.69■■□□□ 1.38
PRKN-203ENST00000366894 LTBP4Q8N2S1 1624 aa23.69■■□□□ 1.38
PRKN-203ENST00000366894 IQSEC2Q5JU85 1478 aa23.68■■□□□ 1.38
PRKN-203ENST00000366894 CLTCQ00610 1675 aaKnown RBP23.68■■□□□ 1.38
PRKN-203ENST00000366894 SOCS7O14512 581 aa23.67■■□□□ 1.38
PRKN-203ENST00000366894 KIF3BO15066 747 aa23.67■■□□□ 1.38
PRKN-203ENST00000366894 NPATQ14207 1427 aa23.67■■□□□ 1.38
PRKN-203ENST00000366894 ZMYM3Q14202 1370 aa23.65■■□□□ 1.38
PRKN-203ENST00000366894 PPARGC1BQ86YN6 1023 aaKnown RBP23.65■■□□□ 1.38
PRKN-203ENST00000366894 PPP6R1Q9UPN7 881 aa23.64■■□□□ 1.37
PRKN-203ENST00000366894 CAMSAP1Q5T5Y3 1602 aa23.63■■□□□ 1.37
PRKN-203ENST00000366894 DUOX2Q9NRD8 1548 aa23.61■■□□□ 1.37
PRKN-203ENST00000366894 RNF17Q9BXT8 1623 aaKnown RBP23.6■■□□□ 1.37
PRKN-203ENST00000366894 EIF2AK4Q9P2K8 1649 aaKnown RBP23.6■■□□□ 1.37
PRKN-203ENST00000366894 FAM50AQ14320 339 aaKnown RBP23.6■■□□□ 1.37
PRKN-203ENST00000366894 KIF15Q9NS87 1388 aa23.6■■□□□ 1.37
PRKN-203ENST00000366894 RRP7BPQ9NSQ0 103 aa23.58■■□□□ 1.37
PRKN-203ENST00000366894 CHIC2Q9UKJ5 165 aa23.57■■□□□ 1.36
PRKN-203ENST00000366894 MROH1Q8NDA8 1641 aa23.57■■□□□ 1.36
PRKN-203ENST00000366894 KDM5DQ9BY66 1539 aa23.57■■□□□ 1.36
PRKN-203ENST00000366894 FAM135AQ9P2D6 1515 aa23.57■■□□□ 1.36
PRKN-203ENST00000366894 PTPRKQ15262 1439 aa23.57■■□□□ 1.36
PRKN-203ENST00000366894 ZNF142P52746 1687 aaPredicted RBP23.55■■□□□ 1.36
PRKN-203ENST00000366894 ADGRL2O95490 1459 aa23.55■■□□□ 1.36
PRKN-203ENST00000366894 MYO3AQ8NEV4 1616 aa23.55■■□□□ 1.36
PRKN-203ENST00000366894 ERBINQ96RT1 1412 aa23.54■■□□□ 1.36
PRKN-203ENST00000366894 ANKRD30AQ9BXX3 1397 aa23.53■■□□□ 1.36
PRKN-203ENST00000366894 PLA2R1Q13018 1463 aa23.52■■□□□ 1.36
PRKN-203ENST00000366894 WASHC2CQ9Y4E1 1318 aa23.52■■□□□ 1.36
PRKN-203ENST00000366894 ABCC3O15438 1527 aa23.51■■□□□ 1.35
PRKN-203ENST00000366894 CEP170BQ9Y4F5 1589 aaPredicted RBP23.51■■□□□ 1.35
PRKN-203ENST00000366894 NCKAP5LQ9HCH0 1330 aa23.51■■□□□ 1.35
PRKN-203ENST00000366894 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.5■■□□□ 1.35
PRKN-203ENST00000366894 ZNF335Q9H4Z2 1342 aaPredicted RBP23.49■■□□□ 1.35
PRKN-203ENST00000366894 PZPP20742 1482 aa23.49■■□□□ 1.35
PRKN-203ENST00000366894 PKD2Q13563 968 aa23.48■■□□□ 1.35
PRKN-203ENST00000366894 PRDM15P57071 1507 aaPredicted RBP23.47■■□□□ 1.35
PRKN-203ENST00000366894 DEPDC5O75140 1603 aa23.47■■□□□ 1.35
PRKN-203ENST00000366894 ZC3H13Q5T200 1668 aaKnown RBP23.47■■□□□ 1.35
PRKN-203ENST00000366894 UBAP1LF5GYI3 381 aa23.46■■□□□ 1.35
PRKN-203ENST00000366894 FBXO31Q5XUX0 539 aaPredicted RBP23.46■■□□□ 1.35
PRKN-203ENST00000366894 CEP152O94986 1710 aa23.44■■□□□ 1.34
PRKN-203ENST00000366894 RRBP1Q9P2E9 1410 aaKnown RBP23.43■■□□□ 1.34
PRKN-203ENST00000366894 VWDEQ8N2E2 1590 aa23.4■■□□□ 1.34
PRKN-203ENST00000366894 ROCK1Q13464 1354 aa23.4■■□□□ 1.34
PRKN-203ENST00000366894 TNRQ92752 1358 aa23.4■■□□□ 1.34
PRKN-203ENST00000366894 ANKRD50Q9ULJ7 1429 aa23.39■■□□□ 1.33
PRKN-203ENST00000366894 A2ML1A8K2U0 1454 aa23.38■■□□□ 1.33
PRKN-203ENST00000366894 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.38■■□□□ 1.33
PRKN-203ENST00000366894 ITGAEP38570 1179 aa23.36■■□□□ 1.33
PRKN-203ENST00000366894 ERVK-7P63135 1459 aa23.35■■□□□ 1.33
PRKN-203ENST00000366894 ARHGAP31Q2M1Z3 1444 aa23.34■■□□□ 1.33
PRKN-203ENST00000366894 LMTK2Q8IWU2 1503 aa23.34■■□□□ 1.33
PRKN-203ENST00000366894 KANK1Q14678 1352 aa23.32■■□□□ 1.32
PRKN-203ENST00000366894 POLR1AO95602 1720 aaPredicted RBP23.32■■□□□ 1.32
PRKN-203ENST00000366894 NLRP1Q9C000 1473 aa23.3■■□□□ 1.32
PRKN-203ENST00000366894 CPS1P31327 1500 aa23.29■■□□□ 1.32
PRKN-203ENST00000366894 UNC13BO14795 1591 aa23.28■■□□□ 1.32
PRKN-203ENST00000366894 CFAP65Q6ZU64 1925 aaKnown RBP23.28■■□□□ 1.32
PRKN-203ENST00000366894 SCAF1Q9H7N4 1312 aaKnown RBP23.28■■□□□ 1.32
PRKN-203ENST00000366894 NEURL4Q96JN8 1562 aa23.27■■□□□ 1.32
PRKN-203ENST00000366894 EFCAB6Q5THR3 1501 aa23.26■■□□□ 1.31
PRKN-203ENST00000366894 UGGT1Q9NYU2 1555 aa23.23■■□□□ 1.31
PRKN-203ENST00000366894 TOM1O60784 492 aa23.23■■□□□ 1.31
PRKN-203ENST00000366894 ACIN1Q9UKV3 1341 aaKnown RBP23.23■■□□□ 1.31
PRKN-203ENST00000366894 MED1Q15648 1581 aaPredicted RBP23.23■■□□□ 1.31
PRKN-203ENST00000366894 PIP4K2BP78356 416 aa23.22■■□□□ 1.31
PRKN-203ENST00000366894 HSPA1LP34931 641 aa23.21■■□□□ 1.31
PRKN-203ENST00000366894 TET3O43151 1660 aa23.2■■□□□ 1.3
PRKN-203ENST00000366894 SYNMO15061 1565 aa23.19■■□□□ 1.3
PRKN-203ENST00000366894 NOS1P29475 1434 aa23.19■■□□□ 1.3
PRKN-203ENST00000366894 ANKLE2Q86XL3 938 aa23.19■■□□□ 1.3
PRKN-203ENST00000366894 IQGAP3Q86VI3 1631 aa23.19■■□□□ 1.3
PRKN-203ENST00000366894 NAIPQ13075 1403 aa23.18■■□□□ 1.3
PRKN-203ENST00000366894 THEMISQ8N1K5 641 aaPredicted RBP23.18■■□□□ 1.3
PRKN-203ENST00000366894 UBR1Q8IWV7 1749 aa23.18■■□□□ 1.3
PRKN-203ENST00000366894 RPRD2Q5VT52 1461 aaKnown RBP23.17■■□□□ 1.3
PRKN-203ENST00000366894 GCC2Q8IWJ2 1684 aa23.16■■□□□ 1.3
PRKN-203ENST00000366894 PIK3C2BO00750 1634 aa23.15■■□□□ 1.3
PRKN-203ENST00000366894 MED14O60244 1454 aa23.14■■□□□ 1.29
PRKN-203ENST00000366894 NPHP4O75161 1426 aaPredicted RBP23.14■■□□□ 1.29
PRKN-203ENST00000366894 NUP155O75694 1391 aa23.14■■□□□ 1.29
PRKN-203ENST00000366894 E9PCH4 1651 aa23.13■■□□□ 1.29
PRKN-203ENST00000366894 HFM1A2PYH4 1435 aa23.12■■□□□ 1.29
PRKN-203ENST00000366894 IDI1Q13907 227 aa23.12■■□□□ 1.29
PRKN-203ENST00000366894 IQGAP1P46940 1657 aa23.11■■□□□ 1.29
PRKN-203ENST00000366894 ARHGAP23Q9P227 1491 aa23.09■■□□□ 1.29
PRKN-203ENST00000366894 SLIT1O75093 1534 aa23.08■■□□□ 1.28
PRKN-203ENST00000366894 KDM5AP29375 1690 aaKnown RBP23.07■■□□□ 1.28
PRKN-203ENST00000366894 PHF23Q9BUL5 403 aaPredicted RBP23.07■■□□□ 1.28
PRKN-203ENST00000366894 ALKQ9UM73 1620 aa23.07■■□□□ 1.28
PRKN-203ENST00000366894 SLC52A1Q9NWF4 448 aa23.05■■□□□ 1.28
PRKN-203ENST00000366894 ADGRB3O60242 1522 aa23.04■■□□□ 1.28
PRKN-203ENST00000366894 LTKP29376 864 aa23.04■■□□□ 1.28
PRKN-203ENST00000366894 TMEM2Q9UHN6 1383 aa23.03■■□□□ 1.28
PRKN-203ENST00000366894 SCAF11Q99590 1463 aaKnown RBP23.02■■□□□ 1.28
PRKN-203ENST00000366894 LRRC7Q96NW7 1537 aa23.01■■□□□ 1.27
PRKN-203ENST00000366894 STRCP1A6NGW2 1772 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms