RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 MPNDQ8N594 471 aa13.67□□□□□ -0.22
CDC42BPA-205ENST00000366769 KIF16BQ96L93 1317 aa13.66□□□□□ -0.22
CDC42BPA-205ENST00000366769 MRE11P49959 708 aa13.66□□□□□ -0.22
CDC42BPA-205ENST00000366769 TMX4Q9H1E5 349 aaPredicted RBP13.66□□□□□ -0.22
CDC42BPA-205ENST00000366769 HTATSF1O43719 755 aaKnown RBP13.65□□□□□ -0.22
CDC42BPA-205ENST00000366769 ZCCHC6Q5VYS8 1495 aaKnown RBP13.65□□□□□ -0.22
CDC42BPA-205ENST00000366769 SKOR2Q2VWA4 1001 aaPredicted RBP13.65□□□□□ -0.22
CDC42BPA-205ENST00000366769 CHMP3Q9Y3E7 222 aa13.65□□□□□ -0.22
CDC42BPA-205ENST00000366769 CBX1P83916 185 aa13.65□□□□□ -0.22
CDC42BPA-205ENST00000366769 IFT57Q9NWB7 429 aa13.64□□□□□ -0.23
CDC42BPA-205ENST00000366769 TPM3P06753 285 aa13.64□□□□□ -0.23
CDC42BPA-205ENST00000366769 KTN1Q86UP2 1357 aaKnown RBP13.63□□□□□ -0.23
CDC42BPA-205ENST00000366769 G3V3G9 751 aa13.63□□□□□ -0.23
CDC42BPA-205ENST00000366769 ABCC9O60706 1549 aa13.63□□□□□ -0.23
CDC42BPA-205ENST00000366769 DCAF8Q5TAQ9 597 aa13.63□□□□□ -0.23
CDC42BPA-205ENST00000366769 GOLGA3Q08378 1498 aa13.63□□□□□ -0.23
CDC42BPA-205ENST00000366769 HSPA5P11021 654 aaKnown RBP13.63□□□□□ -0.23
CDC42BPA-205ENST00000366769 MARCH6O60337 910 aa13.63□□□□□ -0.23
CDC42BPA-205ENST00000366769 MS4A1P11836 297 aa13.63□□□□□ -0.23
CDC42BPA-205ENST00000366769 CDCA8Q53HL2 280 aa13.63□□□□□ -0.23
CDC42BPA-205ENST00000366769 GORABQ5T7V8 394 aa13.63□□□□□ -0.23
CDC42BPA-205ENST00000366769 DHX37Q8IY37 1157 aaKnown RBP13.62□□□□□ -0.23
CDC42BPA-205ENST00000366769 MTUS2Q5JR59 1369 aa13.62□□□□□ -0.23
CDC42BPA-205ENST00000366769 ESPNB1AK53 854 aa13.62□□□□□ -0.23
CDC42BPA-205ENST00000366769 ITPRIPQ8IWB1 547 aa13.62□□□□□ -0.23
CDC42BPA-205ENST00000366769 RRP1P56182 461 aaKnown RBP13.61□□□□□ -0.23
CDC42BPA-205ENST00000366769 RRP12Q5JTH9 1297 aaKnown RBP13.61□□□□□ -0.23
CDC42BPA-205ENST00000366769 ZBED9Q6R2W3 1325 aa13.61□□□□□ -0.23
CDC42BPA-205ENST00000366769 SKIDA1Q1XH10 827 aa13.6□□□□□ -0.23
CDC42BPA-205ENST00000366769 CRBNQ96SW2 442 aa13.6□□□□□ -0.23
CDC42BPA-205ENST00000366769 PLCD4Q9BRC7 762 aa13.6□□□□□ -0.23
CDC42BPA-205ENST00000366769 RNF214Q8ND24 703 aa13.59□□□□□ -0.23
CDC42BPA-205ENST00000366769 RTF1Q92541 710 aaKnown RBP13.59□□□□□ -0.23
CDC42BPA-205ENST00000366769 RDXP35241 583 aaKnown RBP13.59□□□□□ -0.23
CDC42BPA-205ENST00000366769 CCDC34Q96HJ3 373 aa13.59□□□□□ -0.23
CDC42BPA-205ENST00000366769 CCDC173Q0VFZ6 552 aa13.58□□□□□ -0.23
CDC42BPA-205ENST00000366769 FBXW7Q969H0 707 aa13.57□□□□□ -0.24
CDC42BPA-205ENST00000366769 TPD52L1Q16890 204 aaPredicted RBP13.57□□□□□ -0.24
CDC42BPA-205ENST00000366769 IBSPP21815 317 aaPredicted RBP13.57□□□□□ -0.24
CDC42BPA-205ENST00000366769 IPO4Q8TEX9 1081 aaKnown RBP13.57□□□□□ -0.24
CDC42BPA-205ENST00000366769 H0YHG0 523 aa13.57□□□□□ -0.24
CDC42BPA-205ENST00000366769 MEX3CQ5U5Q3 659 aaKnown RBP13.57□□□□□ -0.24
CDC42BPA-205ENST00000366769 PDCL3Q9H2J4 239 aa13.56□□□□□ -0.24
CDC42BPA-205ENST00000366769 SAFB2Q14151 953 aaKnown RBP eCLIP13.56□□□□□ -0.245e-6■■■□□ 16.3
CDC42BPA-205ENST00000366769 MCTP1Q6DN14 999 aa13.56□□□□□ -0.24
CDC42BPA-205ENST00000366769 TOMM22Q9NS69 142 aa13.56□□□□□ -0.24
CDC42BPA-205ENST00000366769 CARD11Q9BXL7 1154 aa13.56□□□□□ -0.24
CDC42BPA-205ENST00000366769 RWDD1Q9H446 243 aaPredicted RBP13.56□□□□□ -0.24
CDC42BPA-205ENST00000366769 AKNAQ7Z591 1439 aa13.56□□□□□ -0.24
CDC42BPA-205ENST00000366769 GRPEL1Q9HAV7 217 aa13.56□□□□□ -0.24
CDC42BPA-205ENST00000366769 TRIM6-TRIM34B2RNG4 842 aa13.56□□□□□ -0.24
CDC42BPA-205ENST00000366769 DEF6Q9H4E7 631 aa13.55□□□□□ -0.24
CDC42BPA-205ENST00000366769 TTLL5Q6EMB2 1281 aa13.55□□□□□ -0.24
CDC42BPA-205ENST00000366769 AK9Q5TCS8 1911 aa13.55□□□□□ -0.24
CDC42BPA-205ENST00000366769 CENPQQ7L2Z9 268 aaPredicted RBP13.54□□□□□ -0.24
CDC42BPA-205ENST00000366769 TRAK2O60296 914 aa13.54□□□□□ -0.24
CDC42BPA-205ENST00000366769 CCDC9Q9Y3X0 531 aaKnown RBP13.54□□□□□ -0.24
CDC42BPA-205ENST00000366769 TSR1Q2NL82 804 aaKnown RBP13.54□□□□□ -0.24
CDC42BPA-205ENST00000366769 CAVIN1Q6NZI2 390 aaKnown RBP13.54□□□□□ -0.24
CDC42BPA-205ENST00000366769 SPDYE4A6NLX3 237 aa13.54□□□□□ -0.24
CDC42BPA-205ENST00000366769 CSB-PGBD3P0DP91 1061 aa13.53□□□□□ -0.24
CDC42BPA-205ENST00000366769 GPATCH3Q96I76 525 aa13.53□□□□□ -0.24
CDC42BPA-205ENST00000366769 XPCQ01831 940 aaPredicted RBP13.53□□□□□ -0.24
CDC42BPA-205ENST00000366769 PPP4R3BQ5MIZ7 849 aa13.53□□□□□ -0.24
CDC42BPA-205ENST00000366769 SF3A1Q15459 793 aaKnown RBP13.52□□□□□ -0.24
CDC42BPA-205ENST00000366769 TCEAL9Q9UHQ7 104 aa13.52□□□□□ -0.24
CDC42BPA-205ENST00000366769 CHMP7Q8WUX9 453 aaPredicted RBP13.52□□□□□ -0.24
CDC42BPA-205ENST00000366769 SRPK2P78362 688 aaKnown RBP13.52□□□□□ -0.25
CDC42BPA-205ENST00000366769 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.52□□□□□ -0.259e-7■■■■■ 149.5
CDC42BPA-205ENST00000366769 ARGLU1Q9NWB6 273 aaPredicted RBP13.52□□□□□ -0.25
CDC42BPA-205ENST00000366769 HMGN5P82970 282 aaKnown RBP13.51□□□□□ -0.25
CDC42BPA-205ENST00000366769 HOMER1Q86YM7 354 aa13.51□□□□□ -0.25
CDC42BPA-205ENST00000366769 PDCL2Q8N4E4 241 aa13.51□□□□□ -0.25
CDC42BPA-205ENST00000366769 LEKR1Q6ZMV7 388 aa13.5□□□□□ -0.25
CDC42BPA-205ENST00000366769 CCNB3Q8WWL7 1395 aa13.5□□□□□ -0.25
CDC42BPA-205ENST00000366769 MLECQ14165 292 aa13.5□□□□□ -0.25
CDC42BPA-205ENST00000366769 DIAPH3Q9NSV4 1193 aa13.5□□□□□ -0.25
CDC42BPA-205ENST00000366769 MNS1Q8NEH6 495 aa13.5□□□□□ -0.25
CDC42BPA-205ENST00000366769 AK7Q96M32 723 aa13.49□□□□□ -0.25
CDC42BPA-205ENST00000366769 RAD21O60216 631 aa13.48□□□□□ -0.25
CDC42BPA-205ENST00000366769 CHMP5Q9NZZ3 219 aa13.48□□□□□ -0.25
CDC42BPA-205ENST00000366769 TRHP20396 242 aaPredicted RBP13.48□□□□□ -0.25
CDC42BPA-205ENST00000366769 SPC24Q8NBT2 197 aa13.48□□□□□ -0.25
CDC42BPA-205ENST00000366769 TSPYL1Q9H0U9 437 aa13.48□□□□□ -0.25
CDC42BPA-205ENST00000366769 SETD5Q9C0A6 1442 aa13.48□□□□□ -0.25
CDC42BPA-205ENST00000366769 RB1CC1Q8TDY2 1594 aa13.48□□□□□ -0.25
CDC42BPA-205ENST00000366769 ST18O60284 1047 aa13.47□□□□□ -0.25
CDC42BPA-205ENST00000366769 GTF2A1P52655 376 aaPredicted RBP13.47□□□□□ -0.25
CDC42BPA-205ENST00000366769 PCMTD1Q96MG8 357 aaPredicted RBP13.47□□□□□ -0.25
CDC42BPA-205ENST00000366769 CCDC70Q6NSX1 233 aa13.47□□□□□ -0.25
CDC42BPA-205ENST00000366769 MORC1Q86VD1 984 aa13.47□□□□□ -0.25
CDC42BPA-205ENST00000366769 CCDC146Q8IYE0 955 aa13.47□□□□□ -0.25
CDC42BPA-205ENST00000366769 GON4LQ3T8J9 2241 aa13.46□□□□□ -0.25
CDC42BPA-205ENST00000366769 RAB3GAP2Q9H2M9 1393 aa13.46□□□□□ -0.25
CDC42BPA-205ENST00000366769 CFAP44Q96MT7 982 aa13.46□□□□□ -0.25
CDC42BPA-205ENST00000366769 CLUAP1Q96AJ1 413 aa13.46□□□□□ -0.26
CDC42BPA-205ENST00000366769 GIMAP7Q8NHV1 300 aa13.46□□□□□ -0.26
CDC42BPA-205ENST00000366769 STK26Q9P289 416 aa13.46□□□□□ -0.26
CDC42BPA-205ENST00000366769 KIF3AQ9Y496 699 aa13.45□□□□□ -0.26
CDC42BPA-205ENST00000366769 GTF2E1P29083 439 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms