RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 PDE4AP27815 886 aa12.03□□□□□ -0.48
SMYD3-201ENST00000366516 CAMSAP2Q08AD1 1489 aa12.03□□□□□ -0.48
SMYD3-201ENST00000366516 PRKCSHP14314 528 aaPredicted RBP12.02□□□□□ -0.48
SMYD3-201ENST00000366516 NLRP13Q86W25 1043 aa12.02□□□□□ -0.48
SMYD3-201ENST00000366516 RAPGEF6Q8TEU7 1601 aa12.02□□□□□ -0.49
SMYD3-201ENST00000366516 WASHC2CQ9Y4E1 1318 aa12.02□□□□□ -0.49
SMYD3-201ENST00000366516 KIAA0556O60303 1618 aa12.02□□□□□ -0.49
SMYD3-201ENST00000366516 ADCY10Q96PN6 1610 aa12.02□□□□□ -0.49
SMYD3-201ENST00000366516 SHANK2Q9UPX8 1470 aa12.01□□□□□ -0.49
SMYD3-201ENST00000366516 KDM5DQ9BY66 1539 aa12.01□□□□□ -0.49
SMYD3-201ENST00000366516 TROQ12816 1431 aaPredicted RBP12□□□□□ -0.49
SMYD3-201ENST00000366516 POLR3GLQ9BT43 218 aa12□□□□□ -0.49
SMYD3-201ENST00000366516 CARD11Q9BXL7 1154 aa12□□□□□ -0.49
SMYD3-201ENST00000366516 CYB5RLQ6IPT4 315 aa11.99□□□□□ -0.49
SMYD3-201ENST00000366516 NPM2Q86SE8 214 aaKnown RBP11.99□□□□□ -0.49
SMYD3-201ENST00000366516 NUP153P49790 1475 aaKnown RBP11.99□□□□□ -0.49
SMYD3-201ENST00000366516 PARD3Q8TEW0 1356 aa11.98□□□□□ -0.49
SMYD3-201ENST00000366516 EXOC6Q8TAG9 804 aa11.97□□□□□ -0.49
SMYD3-201ENST00000366516 DAXXQ9UER7 740 aaPredicted RBP11.97□□□□□ -0.49
SMYD3-201ENST00000366516 KIAA0586Q9BVV6 1533 aa11.97□□□□□ -0.49
SMYD3-201ENST00000366516 DCAF8L1A6NGE4 600 aa11.97□□□□□ -0.49
SMYD3-201ENST00000366516 TRHP20396 242 aaPredicted RBP11.97□□□□□ -0.49
SMYD3-201ENST00000366516 ANKRD50Q9ULJ7 1429 aa11.97□□□□□ -0.49
SMYD3-201ENST00000366516 CEP170Q5SW79 1584 aa11.96□□□□□ -0.49
SMYD3-201ENST00000366516 PKD2Q13563 968 aa11.96□□□□□ -0.49
SMYD3-201ENST00000366516 ZNF326Q5BKZ1 582 aaKnown RBP11.95□□□□□ -0.5
SMYD3-201ENST00000366516 CFDP1Q9UEE9 299 aaPredicted RBP11.95□□□□□ -0.5
SMYD3-201ENST00000366516 LAMC1P11047 1609 aa11.95□□□□□ -0.5
SMYD3-201ENST00000366516 BLMP54132 1417 aaPredicted RBP11.95□□□□□ -0.5
SMYD3-201ENST00000366516 GSE1Q14687 1217 aa11.94□□□□□ -0.5
SMYD3-201ENST00000366516 LAS1LQ9Y4W2 734 aaKnown RBP11.93□□□□□ -0.5
SMYD3-201ENST00000366516 DISP1Q96F81 1524 aa11.93□□□□□ -0.5
SMYD3-201ENST00000366516 GPATCH8Q9UKJ3 1502 aaKnown RBP11.93□□□□□ -0.5
SMYD3-201ENST00000366516 POTEDQ86YR6 584 aa11.93□□□□□ -0.5
SMYD3-201ENST00000366516 CENPQQ7L2Z9 268 aaPredicted RBP11.91□□□□□ -0.5
SMYD3-201ENST00000366516 PTPRGP23470 1445 aa11.91□□□□□ -0.5
SMYD3-201ENST00000366516 ZNF608Q9ULD9 1512 aaPredicted RBP11.91□□□□□ -0.5
SMYD3-201ENST00000366516 ZNF644Q9H582 1327 aaPredicted RBP11.91□□□□□ -0.5
SMYD3-201ENST00000366516 EIF2AK4Q9P2K8 1649 aaKnown RBP11.91□□□□□ -0.5
SMYD3-201ENST00000366516 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.91□□□□□ -0.5
SMYD3-201ENST00000366516 IL27Q8NEV9 243 aa11.91□□□□□ -0.5
SMYD3-201ENST00000366516 NUP155O75694 1391 aa11.9□□□□□ -0.5
SMYD3-201ENST00000366516 ST20-MTHFSA0A0A6YYL1 179 aa11.9□□□□□ -0.5
SMYD3-201ENST00000366516 TRPM1Q7Z4N2 1603 aa11.9□□□□□ -0.5
SMYD3-201ENST00000366516 IFT140Q96RY7 1462 aa11.9□□□□□ -0.5
SMYD3-201ENST00000366516 C9orf84Q5VXU9 1444 aa11.89□□□□□ -0.51
SMYD3-201ENST00000366516 ANO8Q9HCE9 1232 aaPredicted RBP11.89□□□□□ -0.51
SMYD3-201ENST00000366516 COL17A1Q9UMD9 1497 aaPredicted RBP11.89□□□□□ -0.51
SMYD3-201ENST00000366516 EIF4G3O43432 1585 aaKnown RBP11.89□□□□□ -0.51
SMYD3-201ENST00000366516 CNGB1Q14028 1251 aaPredicted RBP11.89□□□□□ -0.51
SMYD3-201ENST00000366516 EIF3AQ14152 1382 aaKnown RBP11.89□□□□□ -0.51
SMYD3-201ENST00000366516 GPRASP1Q5JY77 1395 aa11.89□□□□□ -0.51
SMYD3-201ENST00000366516 SALL2Q9Y467 1007 aaPredicted RBP11.88□□□□□ -0.51
SMYD3-201ENST00000366516 ARHGEF5Q12774 1597 aa11.88□□□□□ -0.51
SMYD3-201ENST00000366516 ZBTB22O15209 634 aa11.87□□□□□ -0.51
SMYD3-201ENST00000366516 FAM161AQ3B820 660 aa11.87□□□□□ -0.51
SMYD3-201ENST00000366516 PRAG1Q86YV5 1406 aa11.87□□□□□ -0.51
SMYD3-201ENST00000366516 NFKBIBQ15653 356 aa11.87□□□□□ -0.51
SMYD3-201ENST00000366516 PRG4Q92954 1404 aaPredicted RBP11.86□□□□□ -0.51
SMYD3-201ENST00000366516 CDC42BPAQ5VT25 1732 aa11.86□□□□□ -0.51
SMYD3-201ENST00000366516 NUP160Q12769 1436 aa11.86□□□□□ -0.51
SMYD3-201ENST00000366516 PRDM15P57071 1507 aaPredicted RBP11.85□□□□□ -0.51
SMYD3-201ENST00000366516 CLASP1Q7Z460 1538 aa11.85□□□□□ -0.51
SMYD3-201ENST00000366516 KDM2BQ8NHM5 1336 aa11.85□□□□□ -0.51
SMYD3-201ENST00000366516 CCDC144AA2RUR9 1427 aa11.85□□□□□ -0.51
SMYD3-201ENST00000366516 SLC4A2P04920 1241 aa11.85□□□□□ -0.51
SMYD3-201ENST00000366516 TSPY4P0CV99 314 aa11.85□□□□□ -0.51
SMYD3-201ENST00000366516 TSPY10P0CW01 314 aa11.85□□□□□ -0.51
SMYD3-201ENST00000366516 CRBNQ96SW2 442 aa11.85□□□□□ -0.51
SMYD3-201ENST00000366516 GRIN2AQ12879 1464 aa11.84□□□□□ -0.51
SMYD3-201ENST00000366516 CARMIL2Q6F5E8 1435 aa11.84□□□□□ -0.51
SMYD3-201ENST00000366516 DCAF11Q8TEB1 546 aa11.84□□□□□ -0.51
SMYD3-201ENST00000366516 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
SMYD3-201ENST00000366516 ARID3CA6NKF2 412 aa11.83□□□□□ -0.52
SMYD3-201ENST00000366516 FAM135AQ9P2D6 1515 aa11.83□□□□□ -0.52
SMYD3-201ENST00000366516 PER1O15534 1290 aaPredicted RBP11.83□□□□□ -0.52
SMYD3-201ENST00000366516 RSPH4AQ5TD94 716 aa11.82□□□□□ -0.52
SMYD3-201ENST00000366516 RSPH6AQ9H0K4 717 aa11.82□□□□□ -0.52
SMYD3-201ENST00000366516 TMF1P82094 1093 aa11.81□□□□□ -0.52
SMYD3-201ENST00000366516 RTN4Q9NQC3 1192 aaKnown RBP11.81□□□□□ -0.52
SMYD3-201ENST00000366516 ZNF777Q9ULD5 760 aaPredicted RBP11.81□□□□□ -0.52
SMYD3-201ENST00000366516 NINLQ9Y2I6 1382 aa11.81□□□□□ -0.52
SMYD3-201ENST00000366516 FAM43AQ8N2R8 423 aa11.8□□□□□ -0.52
SMYD3-201ENST00000366516 NGEFQ8N5V2 710 aa11.8□□□□□ -0.52
SMYD3-201ENST00000366516 ERBINQ96RT1 1412 aa11.8□□□□□ -0.52
SMYD3-201ENST00000366516 ABCC10Q5T3U5 1492 aa11.8□□□□□ -0.52
SMYD3-201ENST00000366516 CDCA7LQ96GN5 454 aa11.8□□□□□ -0.52
SMYD3-201ENST00000366516 KDM2AQ9Y2K7 1162 aa11.8□□□□□ -0.52
SMYD3-201ENST00000366516 CCDC141Q6ZP82 1450 aa11.8□□□□□ -0.52
SMYD3-201ENST00000366516 UNC13BO14795 1591 aa11.79□□□□□ -0.52
SMYD3-201ENST00000366516 SYNJ2O15056 1496 aa11.79□□□□□ -0.52
SMYD3-201ENST00000366516 MAGI1Q96QZ7 1491 aaPredicted RBP11.79□□□□□ -0.52
SMYD3-201ENST00000366516 VIRMAQ69YN4 1812 aaKnown RBP11.79□□□□□ -0.52
SMYD3-201ENST00000366516 WDR43Q15061 677 aaKnown RBP eCLIP11.78□□□□□ -0.52
SMYD3-201ENST00000366516 UBE2Q2Q8WVN8 375 aa11.78□□□□□ -0.52
SMYD3-201ENST00000366516 FRAT1Q92837 279 aaPredicted RBP11.78□□□□□ -0.52
SMYD3-201ENST00000366516 CHD1O14646 1710 aa11.78□□□□□ -0.52
SMYD3-201ENST00000366516 PLEKHD1A6NEE1 506 aa11.78□□□□□ -0.52
SMYD3-201ENST00000366516 BECN1Q14457 450 aa11.78□□□□□ -0.52
SMYD3-201ENST00000366516 CDCA8Q53HL2 280 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms