RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 MICALL2Q8IY33 904 aa6.32□□□□□ -1.4
RNU6-1249P-201ENST00000363237 PHF12Q96QT6 1004 aa6.32□□□□□ -1.4
RNU6-1249P-201ENST00000363237 TBC1D12O60347 775 aa6.31□□□□□ -1.4
RNU6-1249P-201ENST00000363237 OXER1Q8TDS5 423 aa6.3□□□□□ -1.4
RNU6-1249P-201ENST00000363237 TMUB1Q9BVT8 246 aa6.3□□□□□ -1.4
RNU6-1249P-201ENST00000363237 REPIN1Q9BWE0 567 aaKnown RBP6.3□□□□□ -1.4
RNU6-1249P-201ENST00000363237 C2orf72A6NCS6 295 aa6.29□□□□□ -1.4
RNU6-1249P-201ENST00000363237 SPDYE5A6NIY4 337 aa6.29□□□□□ -1.4
RNU6-1249P-201ENST00000363237 KIF3CO14782 793 aa6.29□□□□□ -1.4
RNU6-1249P-201ENST00000363237 AEBP1Q8IUX7 1158 aa6.29□□□□□ -1.4
RNU6-1249P-201ENST00000363237 DDX12PQ92771 950 aa6.29□□□□□ -1.4
RNU6-1249P-201ENST00000363237 GPCPD1Q9NPB8 672 aa6.29□□□□□ -1.4
RNU6-1249P-201ENST00000363237 ATP1B4Q9UN42 357 aaPredicted RBP6.29□□□□□ -1.4
RNU6-1249P-201ENST00000363237 TRPC6Q9Y210 931 aa6.29□□□□□ -1.4
RNU6-1249P-201ENST00000363237 TTLL13PA6NNM8 815 aa6.28□□□□□ -1.4
RNU6-1249P-201ENST00000363237 SSTR3P32745 418 aaPredicted RBP6.28□□□□□ -1.4
RNU6-1249P-201ENST00000363237 PDE4CQ08493 712 aa6.28□□□□□ -1.4
RNU6-1249P-201ENST00000363237 MS4A3Q96HJ5 214 aa6.28□□□□□ -1.4
RNU6-1249P-201ENST00000363237 DPY19L2Q6NUT2 758 aa6.27□□□□□ -1.41
RNU6-1249P-201ENST00000363237 BANK1Q8NDB2 785 aa6.27□□□□□ -1.41
RNU6-1249P-201ENST00000363237 POM121Q96HA1 1249 aa6.27□□□□□ -1.41
RNU6-1249P-201ENST00000363237 GALR2O43603 387 aaPredicted RBP6.26□□□□□ -1.41
RNU6-1249P-201ENST00000363237 PPP1R15AO75807 674 aaPredicted RBP6.26□□□□□ -1.41
RNU6-1249P-201ENST00000363237 UPF1Q92900 1129 aaKnown RBP eCLIP6.26□□□□□ -1.41
RNU6-1249P-201ENST00000363237 TMEM121BQ9BXQ6 578 aaPredicted RBP6.26□□□□□ -1.41
RNU6-1249P-201ENST00000363237 G3V3G9 751 aa6.25□□□□□ -1.41
RNU6-1249P-201ENST00000363237 MDM2Q00987 491 aaPredicted RBP6.25□□□□□ -1.41
RNU6-1249P-201ENST00000363237 TMCO4Q5TGY1 634 aa6.25□□□□□ -1.41
RNU6-1249P-201ENST00000363237 PELP1Q8IZL8 1130 aaKnown RBP6.25□□□□□ -1.41
RNU6-1249P-201ENST00000363237 PROCA1Q8NCQ7 364 aaPredicted RBP6.25□□□□□ -1.41
RNU6-1249P-201ENST00000363237 BEGAINQ9BUH8 593 aa6.25□□□□□ -1.41
RNU6-1249P-201ENST00000363237 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.25□□□□□ -1.41
RNU6-1249P-201ENST00000363237 COG6Q9Y2V7 657 aa6.25□□□□□ -1.41
RNU6-1249P-201ENST00000363237 ZNF330Q9Y3S2 320 aaPredicted RBP6.25□□□□□ -1.41
RNU6-1249P-201ENST00000363237 ACIN1Q9UKV3 1341 aaKnown RBP6.25□□□□□ -1.41
RNU6-1249P-201ENST00000363237 EVI5O60447 810 aa6.24□□□□□ -1.41
RNU6-1249P-201ENST00000363237 RETREG2Q8NC44 543 aa6.24□□□□□ -1.41
RNU6-1249P-201ENST00000363237 TRIM35Q9UPQ4 493 aa6.24□□□□□ -1.41
RNU6-1249P-201ENST00000363237 BOLA1Q9Y3E2 137 aa6.24□□□□□ -1.41
RNU6-1249P-201ENST00000363237 PATL2C9JE40 543 aaKnown RBP6.23□□□□□ -1.41
RNU6-1249P-201ENST00000363237 PRIM1P49642 420 aaKnown RBP6.23□□□□□ -1.41
RNU6-1249P-201ENST00000363237 DIXDC1Q155Q3 683 aa6.23□□□□□ -1.41
RNU6-1249P-201ENST00000363237 WWC1Q8IX03 1113 aa6.23□□□□□ -1.41
RNU6-1249P-201ENST00000363237 RGS22Q8NE09 1264 aa6.23□□□□□ -1.41
RNU6-1249P-201ENST00000363237 SCUBE2Q9NQ36 999 aa6.23□□□□□ -1.41
RNU6-1249P-201ENST00000363237 POLR3EQ9NVU0 708 aa6.23□□□□□ -1.41
RNU6-1249P-201ENST00000363237 TMEM259Q4ZIN3 620 aa6.22□□□□□ -1.41
RNU6-1249P-201ENST00000363237 BMP2KQ9NSY1 1161 aaPredicted RBP6.22□□□□□ -1.41
RNU6-1249P-201ENST00000363237 FAM217BQ9NTX9 383 aaPredicted RBP6.22□□□□□ -1.41
RNU6-1249P-201ENST00000363237 CLK2P49760 499 aaKnown RBP6.21□□□□□ -1.42
RNU6-1249P-201ENST00000363237 MYSM1Q5VVJ2 828 aa6.21□□□□□ -1.42
RNU6-1249P-201ENST00000363237 PDCD7Q8N8D1 485 aaKnown RBP6.21□□□□□ -1.42
RNU6-1249P-201ENST00000363237 EPAS1Q99814 870 aa6.21□□□□□ -1.42
RNU6-1249P-201ENST00000363237 GZF1Q9H116 711 aaPredicted RBP6.21□□□□□ -1.42
RNU6-1249P-201ENST00000363237 NPDC1Q9NQX5 325 aaPredicted RBP6.21□□□□□ -1.42
RNU6-1249P-201ENST00000363237 OATP04181 439 aa6.2□□□□□ -1.42
RNU6-1249P-201ENST00000363237 RFC5P40937 340 aa6.2□□□□□ -1.42
RNU6-1249P-201ENST00000363237 MFAP1P55081 439 aaKnown RBP6.2□□□□□ -1.42
RNU6-1249P-201ENST00000363237 EN1Q05925 392 aaPredicted RBP6.2□□□□□ -1.42
RNU6-1249P-201ENST00000363237 PHOX2BQ99453 314 aa6.2□□□□□ -1.42
RNU6-1249P-201ENST00000363237 PRM3Q9NNZ6 103 aa6.2□□□□□ -1.42
RNU6-1249P-201ENST00000363237 METRNQ9UJH8 293 aa6.2□□□□□ -1.42
RNU6-1249P-201ENST00000363237 PHF14O94880 888 aa6.19□□□□□ -1.42
RNU6-1249P-201ENST00000363237 IRF5Q13568 498 aa6.19□□□□□ -1.42
RNU6-1249P-201ENST00000363237 OCEL1Q9H607 264 aa6.19□□□□□ -1.42
RNU6-1249P-201ENST00000363237 ANO8Q9HCE9 1232 aaPredicted RBP6.19□□□□□ -1.42
RNU6-1249P-201ENST00000363237 SNRKQ9NRH2 765 aa6.19□□□□□ -1.42
RNU6-1249P-201ENST00000363237 MTMR7Q9Y216 660 aa6.19□□□□□ -1.42
RNU6-1249P-201ENST00000363237 C7P10643 843 aa6.18□□□□□ -1.42
RNU6-1249P-201ENST00000363237 PPP2R2DQ66LE6 453 aa6.18□□□□□ -1.42
RNU6-1249P-201ENST00000363237 CALR3Q96L12 384 aaKnown RBP6.18□□□□□ -1.42
RNU6-1249P-201ENST00000363237 SOCS7O14512 581 aa6.17□□□□□ -1.42
RNU6-1249P-201ENST00000363237 MAP3K7O43318 606 aa6.17□□□□□ -1.42
RNU6-1249P-201ENST00000363237 IRX5P78411 483 aaPredicted RBP6.17□□□□□ -1.42
RNU6-1249P-201ENST00000363237 PTCD2Q8WV60 388 aaKnown RBP6.17□□□□□ -1.42
RNU6-1249P-201ENST00000363237 FBXW7Q969H0 707 aa6.17□□□□□ -1.42
RNU6-1249P-201ENST00000363237 L3MBTL3Q96JM7 780 aaPredicted RBP6.17□□□□□ -1.42
RNU6-1249P-201ENST00000363237 CDHR5Q9HBB8 845 aa6.17□□□□□ -1.42
RNU6-1249P-201ENST00000363237 METTL3Q86U44 580 aaKnown RBP6.16□□□□□ -1.42
RNU6-1249P-201ENST00000363237 SLC39A7Q92504 469 aa6.16□□□□□ -1.42
RNU6-1249P-201ENST00000363237 TBC1D2Q9BYX2 928 aa6.16□□□□□ -1.42
RNU6-1249P-201ENST00000363237 TUSC1Q2TAM9 212 aa6.15□□□□□ -1.42
RNU6-1249P-201ENST00000363237 IER5LQ5T953 404 aa6.15□□□□□ -1.42
RNU6-1249P-201ENST00000363237 CERKQ8TCT0 537 aa6.15□□□□□ -1.42
RNU6-1249P-201ENST00000363237 GDPD2Q9HCC8 539 aa6.15□□□□□ -1.42
RNU6-1249P-201ENST00000363237 KCNA1Q09470 495 aa6.14□□□□□ -1.43
RNU6-1249P-201ENST00000363237 SLAIN1Q8ND83 568 aa6.14□□□□□ -1.43
RNU6-1249P-201ENST00000363237 PXYLP1Q8TE99 480 aa6.14□□□□□ -1.43
RNU6-1249P-201ENST00000363237 BRD1O95696 1058 aa6.13□□□□□ -1.43
RNU6-1249P-201ENST00000363237 TYW1BQ6NUM6 668 aa6.13□□□□□ -1.43
RNU6-1249P-201ENST00000363237 TMEM92Q6UXU6 159 aa6.13□□□□□ -1.43
RNU6-1249P-201ENST00000363237 MTMR14Q8NCE2 650 aa6.13□□□□□ -1.43
RNU6-1249P-201ENST00000363237 GLMNQ92990 594 aa6.13□□□□□ -1.43
RNU6-1249P-201ENST00000363237 USTQ9Y2C2 406 aa6.13□□□□□ -1.43
RNU6-1249P-201ENST00000363237 SLC34A2O95436 690 aa6.12□□□□□ -1.43
RNU6-1249P-201ENST00000363237 ABL2P42684 1182 aa6.12□□□□□ -1.43
RNU6-1249P-201ENST00000363237 RIC3Q7Z5B4 369 aa6.12□□□□□ -1.43
RNU6-1249P-201ENST00000363237 PBXIP1Q96AQ6 731 aa6.12□□□□□ -1.43
RNU6-1249P-201ENST00000363237 RBM33Q96EV2 1170 aaKnown RBP6.12□□□□□ -1.43
RNU6-1249P-201ENST00000363237 PLCG2P16885 1265 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms