RNA–Protein interactions for RNA: ENST00000361574.9

R3HDM4-201, Transcript of R3H domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene R3HDM4, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-201ENST00000361574 CCDC144AA2RUR9 1427 aa32.01■■■□□ 2.71
R3HDM4-201ENST00000361574 ZFYVE16Q7Z3T8 1539 aa32.01■■■□□ 2.71
R3HDM4-201ENST00000361574 DEPDC5O75140 1603 aa31.96■■■□□ 2.71
R3HDM4-201ENST00000361574 TRPM1Q7Z4N2 1603 aa31.96■■■□□ 2.71
R3HDM4-201ENST00000361574 INO80Q9ULG1 1556 aaPredicted RBP31.95■■■□□ 2.71
R3HDM4-201ENST00000361574 PRKRIP1Q9H875 184 aaPredicted RBP31.94■■■□□ 2.7
R3HDM4-201ENST00000361574 LAMC1P11047 1609 aa31.94■■■□□ 2.7
R3HDM4-201ENST00000361574 SUPT16HQ9Y5B9 1047 aaKnown RBP31.93■■■□□ 2.7
R3HDM4-201ENST00000361574 PRAG1Q86YV5 1406 aa31.92■■■□□ 2.7
R3HDM4-201ENST00000361574 FANCAO15360 1455 aa31.91■■■□□ 2.7
R3HDM4-201ENST00000361574 ROCK2O75116 1388 aaKnown RBP31.9■■■□□ 2.7
R3HDM4-201ENST00000361574 SPAG9O60271 1321 aaKnown RBP31.89■■■□□ 2.7
R3HDM4-201ENST00000361574 A2MP01023 1474 aa31.87■■■□□ 2.69
R3HDM4-201ENST00000361574 ASXL2Q76L83 1435 aa31.87■■■□□ 2.69
R3HDM4-201ENST00000361574 GPRASP1Q5JY77 1395 aa31.87■■■□□ 2.69
R3HDM4-201ENST00000361574 ZNF326Q5BKZ1 582 aaKnown RBP31.87■■■□□ 2.69
R3HDM4-201ENST00000361574 DCAF11Q8TEB1 546 aa31.87■■■□□ 2.69
R3HDM4-201ENST00000361574 ATP7AQ04656 1500 aa31.87■■■□□ 2.69
R3HDM4-201ENST00000361574 EIF2AK4Q9P2K8 1649 aaKnown RBP31.86■■■□□ 2.69
R3HDM4-201ENST00000361574 DHX29Q7Z478 1369 aaKnown RBP31.86■■■□□ 2.69
R3HDM4-201ENST00000361574 CARD11Q9BXL7 1154 aa31.85■■■□□ 2.69
R3HDM4-201ENST00000361574 VWDEQ8N2E2 1590 aa31.84■■■□□ 2.69
R3HDM4-201ENST00000361574 E9PCH4 1651 aa31.83■■■□□ 2.69
R3HDM4-201ENST00000361574 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.82■■■□□ 2.68
R3HDM4-201ENST00000361574 TET3O43151 1660 aa31.8■■■□□ 2.68
R3HDM4-201ENST00000361574 OSCARQ8IYS5 282 aa31.79■■■□□ 2.68
R3HDM4-201ENST00000361574 TRPM2O94759 1503 aa31.79■■■□□ 2.68
R3HDM4-201ENST00000361574 ADGRL1O94910 1474 aa31.78■■■□□ 2.68
R3HDM4-201ENST00000361574 AFAP1Q8N556 730 aa31.77■■■□□ 2.68
R3HDM4-201ENST00000361574 KDM2AQ9Y2K7 1162 aa31.77■■■□□ 2.68
R3HDM4-201ENST00000361574 PTPRTO14522 1441 aa31.77■■■□□ 2.68
R3HDM4-201ENST00000361574 PRDM15P57071 1507 aaPredicted RBP31.76■■■□□ 2.68
R3HDM4-201ENST00000361574 SPHKAPQ2M3C7 1700 aa31.75■■■□□ 2.67
R3HDM4-201ENST00000361574 NEURL4Q96JN8 1562 aa31.74■■■□□ 2.67
R3HDM4-201ENST00000361574 CFAP74Q9C0B2 1584 aa31.73■■■□□ 2.67
R3HDM4-201ENST00000361574 RNF17Q9BXT8 1623 aaKnown RBP31.73■■■□□ 2.67
R3HDM4-201ENST00000361574 CEP152O94986 1710 aa31.73■■■□□ 2.67
R3HDM4-201ENST00000361574 SCAPERQ9BY12 1400 aa31.73■■■□□ 2.67
R3HDM4-201ENST00000361574 ST20-MTHFSA0A0A6YYL1 179 aa31.7■■■□□ 2.66
R3HDM4-201ENST00000361574 MROH1Q8NDA8 1641 aa31.68■■■□□ 2.66
R3HDM4-201ENST00000361574 CCDC184Q52MB2 194 aa31.68■■■□□ 2.66
R3HDM4-201ENST00000361574 STAC3Q96MF2 364 aa31.68■■■□□ 2.66
R3HDM4-201ENST00000361574 KIDINS220Q9ULH0 1771 aa31.68■■■□□ 2.66
R3HDM4-201ENST00000361574 HNRNPUQ00839 825 aaKnown RBP eCLIP31.66■■■□□ 2.66
R3HDM4-201ENST00000361574 KTN1Q86UP2 1357 aaKnown RBP31.65■■■□□ 2.66
R3HDM4-201ENST00000361574 KANK1Q14678 1352 aa31.65■■■□□ 2.66
R3HDM4-201ENST00000361574 ZNF518AQ6AHZ1 1483 aa31.64■■■□□ 2.66
R3HDM4-201ENST00000361574 MRS2Q9HD23 443 aa31.63■■■□□ 2.65
R3HDM4-201ENST00000361574 MADDQ8WXG6 1647 aa31.62■■■□□ 2.65
R3HDM4-201ENST00000361574 CLTCL1P53675 1640 aa31.62■■■□□ 2.65
R3HDM4-201ENST00000361574 RGL3Q3MIN7 710 aa31.61■■■□□ 2.65
R3HDM4-201ENST00000361574 NPM1P06748 294 aaKnown RBP eCLIP31.6■■■□□ 2.65
R3HDM4-201ENST00000361574 COL17A1Q9UMD9 1497 aaPredicted RBP31.59■■■□□ 2.65
R3HDM4-201ENST00000361574 LMTK2Q8IWU2 1503 aa31.59■■■□□ 2.65
R3HDM4-201ENST00000361574 NBPF1Q3BBV0 1214 aa31.56■■■□□ 2.64
R3HDM4-201ENST00000361574 ZBED9Q6R2W3 1325 aa31.54■■■□□ 2.64
R3HDM4-201ENST00000361574 NEFLP07196 543 aa31.54■■■□□ 2.64
R3HDM4-201ENST00000361574 CD109Q6YHK3 1445 aa31.54■■■□□ 2.64
R3HDM4-201ENST00000361574 MLH3Q9UHC1 1453 aa31.54■■■□□ 2.64
R3HDM4-201ENST00000361574 EFCAB6Q5THR3 1501 aa31.54■■■□□ 2.64
R3HDM4-201ENST00000361574 IQGAP1P46940 1657 aa31.54■■■□□ 2.64
R3HDM4-201ENST00000361574 KIAA1210Q9ULL0 1709 aa31.54■■■□□ 2.64
R3HDM4-201ENST00000361574 POGZQ7Z3K3 1410 aa31.53■■■□□ 2.64
R3HDM4-201ENST00000361574 FKBP8Q14318 412 aa31.52■■■□□ 2.64
R3HDM4-201ENST00000361574 TESK2Q96S53 571 aa31.51■■■□□ 2.63
R3HDM4-201ENST00000361574 KIF3BO15066 747 aa31.48■■■□□ 2.63
R3HDM4-201ENST00000361574 RALBP1Q15311 655 aa31.47■■■□□ 2.63
R3HDM4-201ENST00000361574 POLR3GLQ9BT43 218 aa31.47■■■□□ 2.63
R3HDM4-201ENST00000361574 HECW2Q9P2P5 1572 aa31.47■■■□□ 2.63
R3HDM4-201ENST00000361574 NEO1Q92859 1461 aa31.47■■■□□ 2.63
R3HDM4-201ENST00000361574 FAM9BQ8IZU0 186 aa31.46■■■□□ 2.63
R3HDM4-201ENST00000361574 PPRC1Q5VV67 1664 aaKnown RBP31.45■■■□□ 2.63
R3HDM4-201ENST00000361574 WASHC2CQ9Y4E1 1318 aa31.44■■■□□ 2.62
R3HDM4-201ENST00000361574 BRD4O60885 1362 aaPredicted RBP31.43■■■□□ 2.62
R3HDM4-201ENST00000361574 FRMPD1Q5SYB0 1578 aa31.43■■■□□ 2.62
R3HDM4-201ENST00000361574 MYOM2P54296 1465 aa31.43■■■□□ 2.62
R3HDM4-201ENST00000361574 KIF1BO60333 1816 aa31.42■■■□□ 2.62
R3HDM4-201ENST00000361574 IFT172Q9UG01 1749 aa31.41■■■□□ 2.62
R3HDM4-201ENST00000361574 DISP3Q9P2K9 1392 aa31.39■■■□□ 2.62
R3HDM4-201ENST00000361574 MYBBP1AQ9BQG0 1328 aaKnown RBP31.39■■■□□ 2.62
R3HDM4-201ENST00000361574 PARD3Q8TEW0 1356 aa31.38■■■□□ 2.61
R3HDM4-201ENST00000361574 SCAF11Q99590 1463 aaKnown RBP31.37■■■□□ 2.61
R3HDM4-201ENST00000361574 PER1O15534 1290 aaPredicted RBP31.37■■■□□ 2.61
R3HDM4-201ENST00000361574 MAP3K4Q9Y6R4 1608 aa31.37■■■□□ 2.61
R3HDM4-201ENST00000361574 PNISRQ8TF01 805 aaKnown RBP31.36■■■□□ 2.61
R3HDM4-201ENST00000361574 LRPPRCP42704 1394 aaKnown RBP31.35■■■□□ 2.61
R3HDM4-201ENST00000361574 TMF1P82094 1093 aa31.35■■■□□ 2.61
R3HDM4-201ENST00000361574 ERICH6BQ5W0A0 696 aa31.35■■■□□ 2.61
R3HDM4-201ENST00000361574 ABCA6Q8N139 1617 aa31.34■■■□□ 2.61
R3HDM4-201ENST00000361574 MYT1LQ9UL68 1186 aa31.34■■■□□ 2.61
R3HDM4-201ENST00000361574 NRXN1Q9ULB1 1477 aa31.32■■■□□ 2.6
R3HDM4-201ENST00000361574 ADGRB3O60242 1522 aa31.3■■■□□ 2.6
R3HDM4-201ENST00000361574 GLI2P10070 1586 aa31.29■■■□□ 2.6
R3HDM4-201ENST00000361574 MROH2AA6NES4 1674 aa31.28■■■□□ 2.6
R3HDM4-201ENST00000361574 TMC1Q8TDI8 760 aa31.28■■■□□ 2.6
R3HDM4-201ENST00000361574 UGGT1Q9NYU2 1555 aa31.28■■■□□ 2.6
R3HDM4-201ENST00000361574 SMG6Q86US8 1419 aaKnown RBP31.27■■■□□ 2.6
R3HDM4-201ENST00000361574 RICTORQ6R327 1708 aa31.26■■■□□ 2.59
R3HDM4-201ENST00000361574 ZMYM4Q5VZL5 1548 aa31.25■■■□□ 2.59
R3HDM4-201ENST00000361574 SYNMO15061 1565 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms