RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 ERBINQ96RT1 1412 aa27.83■■■□□ 2.05
CHD1L-201ENST00000361293 MAGI2Q86UL8 1455 aa27.82■■■□□ 2.04
CHD1L-201ENST00000361293 CARD11Q9BXL7 1154 aa27.81■■■□□ 2.04
CHD1L-201ENST00000361293 AFAP1Q8N556 730 aa27.8■■■□□ 2.04
CHD1L-201ENST00000361293 ARAP3Q8WWN8 1544 aa27.79■■■□□ 2.04
CHD1L-201ENST00000361293 PELP1Q8IZL8 1130 aaKnown RBP27.78■■■□□ 2.04
CHD1L-201ENST00000361293 POLR3GLQ9BT43 218 aa27.77■■■□□ 2.04
CHD1L-201ENST00000361293 RGL3Q3MIN7 710 aa27.76■■■□□ 2.03
CHD1L-201ENST00000361293 ZFYVE16Q7Z3T8 1539 aa27.75■■■□□ 2.03
CHD1L-201ENST00000361293 SPAG9O60271 1321 aaKnown RBP27.75■■■□□ 2.03
CHD1L-201ENST00000361293 HNRNPUQ00839 825 aaKnown RBP eCLIP27.75■■■□□ 2.03
CHD1L-201ENST00000361293 ABCA9Q8IUA7 1624 aa27.73■■■□□ 2.03
CHD1L-201ENST00000361293 DHX29Q7Z478 1369 aaKnown RBP27.73■■■□□ 2.03
CHD1L-201ENST00000361293 PRAG1Q86YV5 1406 aa27.73■■■□□ 2.03
CHD1L-201ENST00000361293 A2MP01023 1474 aa27.72■■■□□ 2.03
CHD1L-201ENST00000361293 FANCAO15360 1455 aa27.72■■■□□ 2.03
CHD1L-201ENST00000361293 ROCK2O75116 1388 aaKnown RBP27.71■■■□□ 2.03
CHD1L-201ENST00000361293 ST20-MTHFSA0A0A6YYL1 179 aa27.71■■■□□ 2.03
CHD1L-201ENST00000361293 TRPM1Q7Z4N2 1603 aa27.71■■■□□ 2.03
CHD1L-201ENST00000361293 RTEL1-TNFRSF6BF6WH68 1400 aa27.69■■■□□ 2.02
CHD1L-201ENST00000361293 ASXL2Q76L83 1435 aa27.69■■■□□ 2.02
CHD1L-201ENST00000361293 ATP10AO60312 1499 aa27.68■■■□□ 2.02
CHD1L-201ENST00000361293 MRS2Q9HD23 443 aa27.67■■■□□ 2.02
CHD1L-201ENST00000361293 ARID4BQ4LE39 1312 aaPredicted RBP27.67■■■□□ 2.02
CHD1L-201ENST00000361293 FKBP8Q14318 412 aa27.66■■■□□ 2.02
CHD1L-201ENST00000361293 CNGB1Q14028 1251 aaPredicted RBP27.64■■■□□ 2.02
CHD1L-201ENST00000361293 NBPF1Q3BBV0 1214 aa27.64■■■□□ 2.02
CHD1L-201ENST00000361293 INO80Q9ULG1 1556 aaPredicted RBP27.64■■■□□ 2.01
CHD1L-201ENST00000361293 ATP7AQ04656 1500 aa27.63■■■□□ 2.01
CHD1L-201ENST00000361293 E9PCH4 1651 aa27.63■■■□□ 2.01
CHD1L-201ENST00000361293 FAM9BQ8IZU0 186 aa27.63■■■□□ 2.01
CHD1L-201ENST00000361293 ADGRL1O94910 1474 aa27.62■■■□□ 2.01
CHD1L-201ENST00000361293 OSCARQ8IYS5 282 aa27.61■■■□□ 2.01
CHD1L-201ENST00000361293 BCANQ96GW7 911 aa27.61■■■□□ 2.01
CHD1L-201ENST00000361293 SCAPERQ9BY12 1400 aa27.6■■■□□ 2.01
CHD1L-201ENST00000361293 DEPDC5O75140 1603 aa27.59■■■□□ 2.01
CHD1L-201ENST00000361293 GPRASP1Q5JY77 1395 aa27.57■■■□□ 2
CHD1L-201ENST00000361293 MYT1LQ9UL68 1186 aa27.52■■■□□ 2
CHD1L-201ENST00000361293 PRDM15P57071 1507 aaPredicted RBP27.52■■■□□ 2
CHD1L-201ENST00000361293 NEFLP07196 543 aa27.51■■□□□ 1.99
CHD1L-201ENST00000361293 TRPM2O94759 1503 aa27.51■■□□□ 1.99
CHD1L-201ENST00000361293 LAMC1P11047 1609 aa27.51■■□□□ 1.99
CHD1L-201ENST00000361293 EIF2AK4Q9P2K8 1649 aaKnown RBP27.51■■□□□ 1.99
CHD1L-201ENST00000361293 SPHKAPQ2M3C7 1700 aa27.5■■□□□ 1.99
CHD1L-201ENST00000361293 KIF3BO15066 747 aa27.5■■□□□ 1.99
CHD1L-201ENST00000361293 TET3O43151 1660 aa27.49■■□□□ 1.99
CHD1L-201ENST00000361293 VWDEQ8N2E2 1590 aa27.49■■□□□ 1.99
CHD1L-201ENST00000361293 CLTCL1P53675 1640 aa27.47■■□□□ 1.99
CHD1L-201ENST00000361293 PTPRTO14522 1441 aa27.47■■□□□ 1.99
CHD1L-201ENST00000361293 MROH1Q8NDA8 1641 aa27.47■■□□□ 1.99
CHD1L-201ENST00000361293 KIDINS220Q9ULH0 1771 aa27.47■■□□□ 1.99
CHD1L-201ENST00000361293 NPM1P06748 294 aaKnown RBP eCLIP27.46■■□□□ 1.99
CHD1L-201ENST00000361293 CEP152O94986 1710 aa27.45■■□□□ 1.98
CHD1L-201ENST00000361293 RNF17Q9BXT8 1623 aaKnown RBP27.44■■□□□ 1.98
CHD1L-201ENST00000361293 TESK2Q96S53 571 aa27.44■■□□□ 1.98
CHD1L-201ENST00000361293 MADDQ8WXG6 1647 aa27.42■■□□□ 1.98
CHD1L-201ENST00000361293 KANK1Q14678 1352 aa27.42■■□□□ 1.98
CHD1L-201ENST00000361293 ZBED9Q6R2W3 1325 aa27.42■■□□□ 1.98
CHD1L-201ENST00000361293 DISP3Q9P2K9 1392 aa27.42■■□□□ 1.98
CHD1L-201ENST00000361293 COL17A1Q9UMD9 1497 aaPredicted RBP27.42■■□□□ 1.98
CHD1L-201ENST00000361293 ZNF518AQ6AHZ1 1483 aa27.4■■□□□ 1.98
CHD1L-201ENST00000361293 CD109Q6YHK3 1445 aa27.39■■□□□ 1.98
CHD1L-201ENST00000361293 UGGT1Q9NYU2 1555 aa27.36■■□□□ 1.97
CHD1L-201ENST00000361293 IRX6P78412 446 aaPredicted RBP27.33■■□□□ 1.97
CHD1L-201ENST00000361293 POGZQ7Z3K3 1410 aa27.33■■□□□ 1.97
CHD1L-201ENST00000361293 PNISRQ8TF01 805 aaKnown RBP27.32■■□□□ 1.96
CHD1L-201ENST00000361293 EFCAB6Q5THR3 1501 aa27.32■■□□□ 1.96
CHD1L-201ENST00000361293 TMC1Q8TDI8 760 aa27.31■■□□□ 1.96
CHD1L-201ENST00000361293 PER1O15534 1290 aaPredicted RBP27.31■■□□□ 1.96
CHD1L-201ENST00000361293 PPRC1Q5VV67 1664 aaKnown RBP27.31■■□□□ 1.96
CHD1L-201ENST00000361293 IQGAP1P46940 1657 aa27.3■■□□□ 1.96
CHD1L-201ENST00000361293 CFAP74Q9C0B2 1584 aa27.3■■□□□ 1.96
CHD1L-201ENST00000361293 MYBBP1AQ9BQG0 1328 aaKnown RBP27.3■■□□□ 1.96
CHD1L-201ENST00000361293 RALBP1Q15311 655 aa27.29■■□□□ 1.96
CHD1L-201ENST00000361293 SENP3-EIF4A1A0A087X0R7 540 aa27.28■■□□□ 1.96
CHD1L-201ENST00000361293 FRMPD1Q5SYB0 1578 aa27.28■■□□□ 1.96
CHD1L-201ENST00000361293 KTN1Q86UP2 1357 aaKnown RBP27.28■■□□□ 1.96
CHD1L-201ENST00000361293 TSHZ2Q9NRE2 1034 aa27.27■■□□□ 1.96
CHD1L-201ENST00000361293 TMF1P82094 1093 aa27.27■■□□□ 1.96
CHD1L-201ENST00000361293 BRD4O60885 1362 aaPredicted RBP27.25■■□□□ 1.95
CHD1L-201ENST00000361293 PARD3Q8TEW0 1356 aa27.25■■□□□ 1.95
CHD1L-201ENST00000361293 HECW2Q9P2P5 1572 aa27.24■■□□□ 1.95
CHD1L-201ENST00000361293 MLH3Q9UHC1 1453 aa27.24■■□□□ 1.95
CHD1L-201ENST00000361293 LMTK2Q8IWU2 1503 aa27.23■■□□□ 1.95
CHD1L-201ENST00000361293 PANK3Q9H999 370 aa27.23■■□□□ 1.95
CHD1L-201ENST00000361293 NEURL4Q96JN8 1562 aa27.22■■□□□ 1.95
CHD1L-201ENST00000361293 ABCA6Q8N139 1617 aa27.21■■□□□ 1.95
CHD1L-201ENST00000361293 MROH2AA6NES4 1674 aa27.21■■□□□ 1.95
CHD1L-201ENST00000361293 LRPPRCP42704 1394 aaKnown RBP27.21■■□□□ 1.95
CHD1L-201ENST00000361293 STAC3Q96MF2 364 aa27.21■■□□□ 1.95
CHD1L-201ENST00000361293 SCAF11Q99590 1463 aaKnown RBP27.21■■□□□ 1.95
CHD1L-201ENST00000361293 KIF1BO60333 1816 aa27.2■■□□□ 1.95
CHD1L-201ENST00000361293 RAPGEF3O95398 923 aa27.19■■□□□ 1.94
CHD1L-201ENST00000361293 CC2D1BQ5T0F9 858 aaKnown RBP27.18■■□□□ 1.94
CHD1L-201ENST00000361293 GGT6Q6P531 493 aa27.18■■□□□ 1.94
CHD1L-201ENST00000361293 MAP3K4Q9Y6R4 1608 aa27.18■■□□□ 1.94
CHD1L-201ENST00000361293 ADGRF5Q8IZF2 1346 aa27.17■■□□□ 1.94
CHD1L-201ENST00000361293 CFAP65Q6ZU64 1925 aaKnown RBP27.16■■□□□ 1.94
CHD1L-201ENST00000361293 NLRP13Q86W25 1043 aa27.16■■□□□ 1.94
CHD1L-201ENST00000361293 IFT172Q9UG01 1749 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms