RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.87■■□□□ 1.73
NCKAP1-201ENST00000360982 COG3Q96JB2 828 aa25.87■■□□□ 1.73
NCKAP1-201ENST00000360982 SMC4Q9NTJ3 1288 aa25.87■■□□□ 1.73
NCKAP1-201ENST00000360982 GTF2E1P29083 439 aaPredicted RBP25.85■■□□□ 1.73
NCKAP1-201ENST00000360982 GPATCH3Q96I76 525 aa25.85■■□□□ 1.73
NCKAP1-201ENST00000360982 PDE3BQ13370 1112 aa25.84■■□□□ 1.73
NCKAP1-201ENST00000360982 STAC3Q96MF2 364 aa25.84■■□□□ 1.73
NCKAP1-201ENST00000360982 CHMP3Q9Y3E7 222 aa25.84■■□□□ 1.73
NCKAP1-201ENST00000360982 ST20-MTHFSA0A0A6YYL1 179 aa25.83■■□□□ 1.73
NCKAP1-201ENST00000360982 MYOM3Q5VTT5 1437 aa25.83■■□□□ 1.73
NCKAP1-201ENST00000360982 CGNL1Q0VF96 1302 aa25.83■■□□□ 1.73
NCKAP1-201ENST00000360982 PLCB2Q00722 1185 aa25.81■■□□□ 1.72
NCKAP1-201ENST00000360982 EVA1CP58658 441 aa25.8■■□□□ 1.72
NCKAP1-201ENST00000360982 PRKCSHP14314 528 aaPredicted RBP25.8■■□□□ 1.72
NCKAP1-201ENST00000360982 PMFBP1Q8TBY8 1022 aa25.8■■□□□ 1.72
NCKAP1-201ENST00000360982 GNL2Q13823 731 aaKnown RBP25.79■■□□□ 1.72
NCKAP1-201ENST00000360982 RSPH6AQ9H0K4 717 aa25.79■■□□□ 1.72
NCKAP1-201ENST00000360982 G3V3G9 751 aa25.78■■□□□ 1.72
NCKAP1-201ENST00000360982 DCAF8Q5TAQ9 597 aa25.78■■□□□ 1.72
NCKAP1-201ENST00000360982 RAD54L2Q9Y4B4 1467 aa25.78■■□□□ 1.72
NCKAP1-201ENST00000360982 KIF15Q9NS87 1388 aa25.77■■□□□ 1.72
NCKAP1-201ENST00000360982 C1orf141Q5JVX7 400 aa25.77■■□□□ 1.72
NCKAP1-201ENST00000360982 USP35Q9P2H5 1018 aa25.77■■□□□ 1.72
NCKAP1-201ENST00000360982 RUSC2Q8N2Y8 1516 aa25.77■■□□□ 1.72
NCKAP1-201ENST00000360982 AEBP2Q6ZN18 517 aaPredicted RBP25.77■■□□□ 1.72
NCKAP1-201ENST00000360982 SLC4A10Q6U841 1118 aa25.76■■□□□ 1.71
NCKAP1-201ENST00000360982 TCERG1O14776 1098 aaKnown RBP25.76■■□□□ 1.71
NCKAP1-201ENST00000360982 MINK1Q8N4C8 1332 aaPredicted RBP25.75■■□□□ 1.71
NCKAP1-201ENST00000360982 DHX57Q6P158 1386 aaKnown RBP25.75■■□□□ 1.71
NCKAP1-201ENST00000360982 CENPJQ9HC77 1338 aaPredicted RBP25.74■■□□□ 1.71
NCKAP1-201ENST00000360982 PANK3Q9H999 370 aa25.74■■□□□ 1.71
NCKAP1-201ENST00000360982 TEFQ10587 303 aa25.74■■□□□ 1.71
NCKAP1-201ENST00000360982 VSIG10Q8N0Z9 540 aa25.72■■□□□ 1.71
NCKAP1-201ENST00000360982 AQRO60306 1485 aaKnown RBP eCLIP25.72■■□□□ 1.711e-7■■■■□ 26.5
NCKAP1-201ENST00000360982 CCDC146Q8IYE0 955 aa25.71■■□□□ 1.71
NCKAP1-201ENST00000360982 MSNP26038 577 aaKnown RBP25.7■■□□□ 1.71
NCKAP1-201ENST00000360982 GRIN2BQ13224 1484 aa25.7■■□□□ 1.71
NCKAP1-201ENST00000360982 MYBBP1AQ9BQG0 1328 aaKnown RBP25.7■■□□□ 1.7
NCKAP1-201ENST00000360982 PSME1Q06323 249 aa25.69■■□□□ 1.7
NCKAP1-201ENST00000360982 HSP90AA2PQ14568 343 aaPredicted RBP25.68■■□□□ 1.7
NCKAP1-201ENST00000360982 HTATSF1O43719 755 aaKnown RBP25.67■■□□□ 1.7
NCKAP1-201ENST00000360982 FRAT2O75474 233 aaPredicted RBP25.67■■□□□ 1.7
NCKAP1-201ENST00000360982 ANO8Q9HCE9 1232 aaPredicted RBP25.66■■□□□ 1.7
NCKAP1-201ENST00000360982 CLUAP1Q96AJ1 413 aa25.65■■□□□ 1.7
NCKAP1-201ENST00000360982 ATF3P18847 181 aa25.64■■□□□ 1.7
NCKAP1-201ENST00000360982 TTC5Q8N0Z6 440 aa25.64■■□□□ 1.7
NCKAP1-201ENST00000360982 TRIM6-TRIM34B2RNG4 842 aa25.63■■□□□ 1.69
NCKAP1-201ENST00000360982 CLSTN1O94985 981 aa25.62■■□□□ 1.69
NCKAP1-201ENST00000360982 USP47Q96K76 1375 aa25.62■■□□□ 1.69
NCKAP1-201ENST00000360982 GSE1Q14687 1217 aa25.61■■□□□ 1.69
NCKAP1-201ENST00000360982 NGEFQ8N5V2 710 aa25.61■■□□□ 1.69
NCKAP1-201ENST00000360982 CCDC34Q96HJ3 373 aa25.61■■□□□ 1.69
NCKAP1-201ENST00000360982 NEXNQ0ZGT2 675 aa25.59■■□□□ 1.69
NCKAP1-201ENST00000360982 CUX1P39880 1505 aa25.58■■□□□ 1.68
NCKAP1-201ENST00000360982 GZF1Q9H116 711 aaPredicted RBP25.57■■□□□ 1.68
NCKAP1-201ENST00000360982 DIAPH1O60610 1272 aaKnown RBP25.57■■□□□ 1.68
NCKAP1-201ENST00000360982 FGD6Q6ZV73 1430 aa25.56■■□□□ 1.68
NCKAP1-201ENST00000360982 RRP7AQ9Y3A4 280 aaKnown RBP25.56■■□□□ 1.68
NCKAP1-201ENST00000360982 SYNJ2O15056 1496 aa25.55■■□□□ 1.68
NCKAP1-201ENST00000360982 MEX3CQ5U5Q3 659 aaKnown RBP25.55■■□□□ 1.68
NCKAP1-201ENST00000360982 PTMSP20962 102 aa25.55■■□□□ 1.68
NCKAP1-201ENST00000360982 GBP4Q96PP9 640 aa25.55■■□□□ 1.68
NCKAP1-201ENST00000360982 SLKQ9H2G2 1235 aaPredicted RBP25.55■■□□□ 1.68
NCKAP1-201ENST00000360982 GOLGA6L3A6NEY3 463 aa25.54■■□□□ 1.68
NCKAP1-201ENST00000360982 E9PSI1 815 aa25.54■■□□□ 1.68
NCKAP1-201ENST00000360982 SPRYD3Q8NCJ5 442 aa25.54■■□□□ 1.68
NCKAP1-201ENST00000360982 ANKRD50Q9ULJ7 1429 aa25.54■■□□□ 1.68
NCKAP1-201ENST00000360982 ZNF644Q9H582 1327 aaPredicted RBP25.54■■□□□ 1.68
NCKAP1-201ENST00000360982 PRG4Q92954 1404 aaPredicted RBP25.52■■□□□ 1.68
NCKAP1-201ENST00000360982 ELL2O00472 640 aaPredicted RBP25.52■■□□□ 1.68
NCKAP1-201ENST00000360982 MSH5O43196 834 aa25.52■■□□□ 1.68
NCKAP1-201ENST00000360982 AMER1Q5JTC6 1135 aaPredicted RBP25.51■■□□□ 1.67
NCKAP1-201ENST00000360982 AFAP1Q8N556 730 aa25.51■■□□□ 1.67
NCKAP1-201ENST00000360982 KIF3AQ9Y496 699 aa25.51■■□□□ 1.67
NCKAP1-201ENST00000360982 RAPGEF4Q8WZA2 1011 aa25.51■■□□□ 1.67
NCKAP1-201ENST00000360982 MRC2Q9UBG0 1479 aa25.5■■□□□ 1.67
NCKAP1-201ENST00000360982 ARID3AQ99856 593 aa25.5■■□□□ 1.67
NCKAP1-201ENST00000360982 TOMM22Q9NS69 142 aa25.49■■□□□ 1.67
NCKAP1-201ENST00000360982 LRRFIP1Q32MZ4 808 aaKnown RBP25.49■■□□□ 1.67
NCKAP1-201ENST00000360982 IFT140Q96RY7 1462 aa25.49■■□□□ 1.67
NCKAP1-201ENST00000360982 MIA2Q96PC5 1412 aa25.48■■□□□ 1.67
NCKAP1-201ENST00000360982 ZKSCAN2Q63HK3 967 aa25.48■■□□□ 1.67
NCKAP1-201ENST00000360982 DDX58O95786 925 aaKnown RBP25.48■■□□□ 1.67
NCKAP1-201ENST00000360982 HSP90B1P14625 803 aaKnown RBP25.48■■□□□ 1.67
NCKAP1-201ENST00000360982 PRKRIP1Q9H875 184 aaPredicted RBP25.48■■□□□ 1.67
NCKAP1-201ENST00000360982 CFTRP13569 1480 aa25.48■■□□□ 1.67
NCKAP1-201ENST00000360982 CASKIN1Q8WXD9 1431 aa25.46■■□□□ 1.67
NCKAP1-201ENST00000360982 CHMP4CQ96CF2 233 aa25.46■■□□□ 1.67
NCKAP1-201ENST00000360982 CHAF1AQ13111 956 aaPredicted RBP25.46■■□□□ 1.67
NCKAP1-201ENST00000360982 FYCO1Q9BQS8 1478 aa25.45■■□□□ 1.67
NCKAP1-201ENST00000360982 MFAP1P55081 439 aaKnown RBP25.45■■□□□ 1.66
NCKAP1-201ENST00000360982 SYTL4Q96C24 671 aaPredicted RBP25.45■■□□□ 1.66
NCKAP1-201ENST00000360982 DRC7Q8IY82 874 aa25.44■■□□□ 1.66
NCKAP1-201ENST00000360982 C9orf78Q9NZ63 289 aaPredicted RBP25.44■■□□□ 1.66
NCKAP1-201ENST00000360982 SYAP1Q96A49 352 aaPredicted RBP25.44■■□□□ 1.66
NCKAP1-201ENST00000360982 ARHGAP5Q13017 1502 aa25.44■■□□□ 1.66
NCKAP1-201ENST00000360982 TXNDC2Q86VQ3 553 aa25.43■■□□□ 1.66
NCKAP1-201ENST00000360982 EIF2S2P20042 333 aaKnown RBP25.42■■□□□ 1.66
NCKAP1-201ENST00000360982 THEMISQ8N1K5 641 aaPredicted RBP25.42■■□□□ 1.66
NCKAP1-201ENST00000360982 API5Q9BZZ5 524 aaKnown RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms