RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 SMC4Q9NTJ3 1288 aa15.27■□□□□ 0.03
CCDC144A-204ENST00000360524 PMFBP1Q8TBY8 1022 aa15.25■□□□□ 0.03
CCDC144A-204ENST00000360524 NGDNQ8NEJ9 315 aaKnown RBP15.25■□□□□ 0.03
CCDC144A-204ENST00000360524 GSE1Q14687 1217 aa15.23■□□□□ 0.03
CCDC144A-204ENST00000360524 CHMP3Q9Y3E7 222 aa15.23■□□□□ 0.03
CCDC144A-204ENST00000360524 SLC4A10Q6U841 1118 aa15.23■□□□□ 0.03
CCDC144A-204ENST00000360524 CCDC9Q9Y3X0 531 aaKnown RBP15.23■□□□□ 0.03
CCDC144A-204ENST00000360524 SLC4A3P48751 1232 aa15.23■□□□□ 0.03
CCDC144A-204ENST00000360524 LMOD3Q0VAK6 560 aa15.22■□□□□ 0.03
CCDC144A-204ENST00000360524 HDAC5Q9UQL6 1122 aa15.21■□□□□ 0.03
CCDC144A-204ENST00000360524 AMPHP49418 695 aa15.21■□□□□ 0.03
CCDC144A-204ENST00000360524 SYAP1Q96A49 352 aaPredicted RBP15.21■□□□□ 0.03
CCDC144A-204ENST00000360524 NLRP13Q86W25 1043 aa15.21■□□□□ 0.03
CCDC144A-204ENST00000360524 NOC3LQ8WTT2 800 aaKnown RBP15.21■□□□□ 0.03
CCDC144A-204ENST00000360524 ATAD2BQ9ULI0 1458 aa15.2■□□□□ 0.02
CCDC144A-204ENST00000360524 GPATCH3Q96I76 525 aa15.2■□□□□ 0.02
CCDC144A-204ENST00000360524 PDE4CQ08493 712 aa15.2■□□□□ 0.02
CCDC144A-204ENST00000360524 GORABQ5T7V8 394 aa15.2■□□□□ 0.02
CCDC144A-204ENST00000360524 TMX4Q9H1E5 349 aaPredicted RBP15.2■□□□□ 0.02
CCDC144A-204ENST00000360524 HMMRO75330 724 aa15.2■□□□□ 0.02
CCDC144A-204ENST00000360524 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.2■□□□□ 0.02
CCDC144A-204ENST00000360524 CREBRFQ8IUR6 639 aa15.19■□□□□ 0.02
CCDC144A-204ENST00000360524 TRAK1Q9UPV9 953 aa15.19■□□□□ 0.02
CCDC144A-204ENST00000360524 CCDC144AA2RUR9 1427 aa15.19■□□□□ 0.02
CCDC144A-204ENST00000360524 RRP7AQ9Y3A4 280 aaKnown RBP15.19■□□□□ 0.02
CCDC144A-204ENST00000360524 TAF7LQ5H9L4 462 aa15.18■□□□□ 0.02
CCDC144A-204ENST00000360524 PLIN1O60240 522 aa15.18■□□□□ 0.02
CCDC144A-204ENST00000360524 PHLDB1Q86UU1 1377 aa15.18■□□□□ 0.02
CCDC144A-204ENST00000360524 UACAQ9BZF9 1416 aa15.18■□□□□ 0.02
CCDC144A-204ENST00000360524 CENPJQ9HC77 1338 aaPredicted RBP15.18■□□□□ 0.02
CCDC144A-204ENST00000360524 FANCD2Q9BXW9 1451 aa15.17■□□□□ 0.02
CCDC144A-204ENST00000360524 KIF15Q9NS87 1388 aa15.17■□□□□ 0.02
CCDC144A-204ENST00000360524 PKNOX2Q96KN3 472 aa15.17■□□□□ 0.02
CCDC144A-204ENST00000360524 PDE3BQ13370 1112 aa15.16■□□□□ 0.02
CCDC144A-204ENST00000360524 HTATSF1O43719 755 aaKnown RBP15.16■□□□□ 0.02
CCDC144A-204ENST00000360524 TPM4P67936 248 aa15.16■□□□□ 0.02
CCDC144A-204ENST00000360524 LTV1Q96GA3 475 aaPredicted RBP15.16■□□□□ 0.02
CCDC144A-204ENST00000360524 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
CCDC144A-204ENST00000360524 NUTM2FA1L443 756 aa15.16■□□□□ 0.02
CCDC144A-204ENST00000360524 PTPRGP23470 1445 aa15.15■□□□□ 0.02
CCDC144A-204ENST00000360524 GOLGA6L1Q8N7Z2 621 aa15.15■□□□□ 0.02
CCDC144A-204ENST00000360524 FOXD4L6Q3SYB3 417 aaPredicted RBP15.14■□□□□ 0.01
CCDC144A-204ENST00000360524 FOXD4L3Q6VB84 417 aaPredicted RBP15.14■□□□□ 0.01
CCDC144A-204ENST00000360524 A0A0U1RQG5 324 aaPredicted RBP15.14■□□□□ 0.01
CCDC144A-204ENST00000360524 FANCIQ9NVI1 1328 aa15.14■□□□□ 0.01
CCDC144A-204ENST00000360524 PRKCSHP14314 528 aaPredicted RBP15.13■□□□□ 0.01
CCDC144A-204ENST00000360524 BCL2L13Q9BXK5 485 aa15.13■□□□□ 0.01
CCDC144A-204ENST00000360524 ZNF771Q7L3S4 317 aaPredicted RBP15.13■□□□□ 0.01
CCDC144A-204ENST00000360524 MYBBP1AQ9BQG0 1328 aaKnown RBP15.13■□□□□ 0.01
CCDC144A-204ENST00000360524 ST20-MTHFSA0A0A6YYL1 179 aa15.12■□□□□ 0.01
CCDC144A-204ENST00000360524 ANO8Q9HCE9 1232 aaPredicted RBP15.12■□□□□ 0.01
CCDC144A-204ENST00000360524 VGFO15240 615 aaPredicted RBP15.12■□□□□ 0.01
CCDC144A-204ENST00000360524 PANK3Q9H999 370 aa15.12■□□□□ 0.01
CCDC144A-204ENST00000360524 RASSF8Q8NHQ8 419 aa15.1■□□□□ 0.01
CCDC144A-204ENST00000360524 EXOC6Q8TAG9 804 aa15.1■□□□□ 0.01
CCDC144A-204ENST00000360524 EVC2Q86UK5 1308 aa15.1■□□□□ 0.01
CCDC144A-204ENST00000360524 COG3Q96JB2 828 aa15.09■□□□□ 0.01
CCDC144A-204ENST00000360524 FAM13BQ9NYF5 915 aa15.09■□□□□ 0.01
CCDC144A-204ENST00000360524 ELL2O00472 640 aaPredicted RBP15.09■□□□□ 0.01
CCDC144A-204ENST00000360524 RILPL2Q969X0 211 aa15.09■□□□□ 0.01
CCDC144A-204ENST00000360524 PDE4AP27815 886 aa15.09■□□□□ 0.01
CCDC144A-204ENST00000360524 CSPP1Q1MSJ5 1256 aa15.09■□□□□ 0.01
CCDC144A-204ENST00000360524 CRBNQ96SW2 442 aa15.09■□□□□ 0.01
CCDC144A-204ENST00000360524 CGNL1Q0VF96 1302 aa15.08■□□□□ 0.01
CCDC144A-204ENST00000360524 ST18O60284 1047 aa15.08■□□□□ 0
CCDC144A-204ENST00000360524 TOMM22Q9NS69 142 aa15.08■□□□□ 0
CCDC144A-204ENST00000360524 G3V3G9 751 aa15.07■□□□□ 0
CCDC144A-204ENST00000360524 DCAF8Q5TAQ9 597 aa15.07■□□□□ 0
CCDC144A-204ENST00000360524 DDX11L8A8MPP1 907 aa15.07■□□□□ 0
CCDC144A-204ENST00000360524 SETQ01105 290 aaPredicted RBP15.07■□□□□ 0
CCDC144A-204ENST00000360524 KIF16BQ96L93 1317 aa15.07■□□□□ 0
CCDC144A-204ENST00000360524 ANKRD45Q5TZF3 282 aa15.07■□□□□ 0
CCDC144A-204ENST00000360524 DHX57Q6P158 1386 aaKnown RBP15.06■□□□□ 0
CCDC144A-204ENST00000360524 C1orf141Q5JVX7 400 aa15.05■□□□□ 0
CCDC144A-204ENST00000360524 RUSC2Q8N2Y8 1516 aa15.05■□□□□ -0
CCDC144A-204ENST00000360524 GTF2E1P29083 439 aaPredicted RBP15.05■□□□□ -0
CCDC144A-204ENST00000360524 PHF14O94880 888 aa15.05■□□□□ -0
CCDC144A-204ENST00000360524 FAM161AQ3B820 660 aa15.05■□□□□ -0
CCDC144A-204ENST00000360524 CYB5RLQ6IPT4 315 aa15.04■□□□□ -0
CCDC144A-204ENST00000360524 CENPQQ7L2Z9 268 aaPredicted RBP15.04■□□□□ -0
CCDC144A-204ENST00000360524 CCDC34Q96HJ3 373 aa15.04■□□□□ -0
CCDC144A-204ENST00000360524 RRP1P56182 461 aaKnown RBP15.04■□□□□ -0
CCDC144A-204ENST00000360524 DDX49Q9Y6V7 483 aaKnown RBP15.03■□□□□ -0
CCDC144A-204ENST00000360524 USP47Q96K76 1375 aa15.03■□□□□ -0
CCDC144A-204ENST00000360524 MINK1Q8N4C8 1332 aaPredicted RBP15.03■□□□□ -0
CCDC144A-204ENST00000360524 SF3A1Q15459 793 aaKnown RBP15.03■□□□□ -0
CCDC144A-204ENST00000360524 OSCARQ8IYS5 282 aa15.03■□□□□ -0
CCDC144A-204ENST00000360524 H3BQV1 296 aa15.03■□□□□ -0
CCDC144A-204ENST00000360524 FRAT2O75474 233 aaPredicted RBP15.03■□□□□ -0
CCDC144A-204ENST00000360524 IFFO2Q5TF58 517 aa15.03■□□□□ -0
CCDC144A-204ENST00000360524 PODXL2Q9NZ53 605 aa15.03■□□□□ -0
CCDC144A-204ENST00000360524 PES1O00541 588 aaKnown RBP15.02■□□□□ -0
CCDC144A-204ENST00000360524 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.02■□□□□ -0
CCDC144A-204ENST00000360524 COG6Q9Y2V7 657 aa15.02□□□□□ -0.01
CCDC144A-204ENST00000360524 GAPVD1Q14C86 1478 aa15.02□□□□□ -0.01
CCDC144A-204ENST00000360524 E9PSI1 815 aa15.01□□□□□ -0.01
CCDC144A-204ENST00000360524 EVA1CP58658 441 aa15.01□□□□□ -0.01
CCDC144A-204ENST00000360524 VPS53Q5VIR6 699 aa15□□□□□ -0.01
CCDC144A-204ENST00000360524 FGD5Q6ZNL6 1462 aa15□□□□□ -0.01
CCDC144A-204ENST00000360524 CCAR2Q8N163 923 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms