RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 ANKRD30BQ9BXX2 1392 aa28.87■■■□□ 2.21
CBWD3-201ENST00000360171 MAGI2Q86UL8 1455 aa28.87■■■□□ 2.21
CBWD3-201ENST00000360171 FAM135AQ9P2D6 1515 aa28.87■■■□□ 2.21
CBWD3-201ENST00000360171 IQGAP3Q86VI3 1631 aa28.86■■■□□ 2.21
CBWD3-201ENST00000360171 MLH3Q9UHC1 1453 aa28.84■■■□□ 2.21
CBWD3-201ENST00000360171 PKD2Q13563 968 aa28.82■■■□□ 2.2
CBWD3-201ENST00000360171 MYT1LQ9UL68 1186 aa28.82■■■□□ 2.2
CBWD3-201ENST00000360171 DEPDC5O75140 1603 aa28.82■■■□□ 2.2
CBWD3-201ENST00000360171 FRMPD1Q5SYB0 1578 aa28.82■■■□□ 2.2
CBWD3-201ENST00000360171 EIF2AK4Q9P2K8 1649 aaKnown RBP28.81■■■□□ 2.2
CBWD3-201ENST00000360171 ABCA6Q8N139 1617 aa28.81■■■□□ 2.2
CBWD3-201ENST00000360171 RAPGEF3O95398 923 aa28.79■■■□□ 2.2
CBWD3-201ENST00000360171 TONSLQ96HA7 1378 aa28.79■■■□□ 2.2
CBWD3-201ENST00000360171 TEX14Q8IWB6 1497 aa28.78■■■□□ 2.2
CBWD3-201ENST00000360171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.77■■■□□ 2.2
CBWD3-201ENST00000360171 DHX29Q7Z478 1369 aaKnown RBP28.77■■■□□ 2.2
CBWD3-201ENST00000360171 RPRD2Q5VT52 1461 aaKnown RBP28.76■■■□□ 2.19
CBWD3-201ENST00000360171 SUPT16HQ9Y5B9 1047 aaKnown RBP28.74■■■□□ 2.19
CBWD3-201ENST00000360171 MROH1Q8NDA8 1641 aa28.73■■■□□ 2.19
CBWD3-201ENST00000360171 A2MP01023 1474 aa28.73■■■□□ 2.19
CBWD3-201ENST00000360171 DIP2CQ9Y2E4 1556 aa28.72■■■□□ 2.19
CBWD3-201ENST00000360171 PPP1R15AO75807 674 aaPredicted RBP28.69■■■□□ 2.18
CBWD3-201ENST00000360171 ZMYM4Q5VZL5 1548 aa28.69■■■□□ 2.18
CBWD3-201ENST00000360171 PRDM15P57071 1507 aaPredicted RBP28.69■■■□□ 2.18
CBWD3-201ENST00000360171 VWDEQ8N2E2 1590 aa28.68■■■□□ 2.18
CBWD3-201ENST00000360171 RNF17Q9BXT8 1623 aaKnown RBP28.67■■■□□ 2.18
CBWD3-201ENST00000360171 BCORL1Q5H9F3 1711 aa28.66■■■□□ 2.18
CBWD3-201ENST00000360171 KIF3BO15066 747 aa28.66■■■□□ 2.18
CBWD3-201ENST00000360171 E9PCH4 1651 aa28.65■■■□□ 2.18
CBWD3-201ENST00000360171 YEATS2Q9ULM3 1422 aa28.64■■■□□ 2.18
CBWD3-201ENST00000360171 TET3O43151 1660 aa28.62■■■□□ 2.17
CBWD3-201ENST00000360171 PLA2R1Q13018 1463 aa28.6■■■□□ 2.17
CBWD3-201ENST00000360171 COL17A1Q9UMD9 1497 aaPredicted RBP28.58■■■□□ 2.17
CBWD3-201ENST00000360171 CEP152O94986 1710 aa28.58■■■□□ 2.17
CBWD3-201ENST00000360171 L3MBTL2Q969R5 705 aa28.58■■■□□ 2.17
CBWD3-201ENST00000360171 KANK1Q14678 1352 aa28.56■■■□□ 2.16
CBWD3-201ENST00000360171 DNAJC5Q9H3Z4 198 aa28.55■■■□□ 2.16
CBWD3-201ENST00000360171 ATP10AO60312 1499 aa28.53■■■□□ 2.16
CBWD3-201ENST00000360171 SPHKAPQ2M3C7 1700 aa28.53■■■□□ 2.16
CBWD3-201ENST00000360171 LMTK2Q8IWU2 1503 aa28.5■■■□□ 2.15
CBWD3-201ENST00000360171 DDX10Q13206 875 aaKnown RBP28.5■■■□□ 2.15
CBWD3-201ENST00000360171 EFCAB6Q5THR3 1501 aa28.49■■■□□ 2.15
CBWD3-201ENST00000360171 CCDC144AA2RUR9 1427 aa28.49■■■□□ 2.15
CBWD3-201ENST00000360171 CCER2I3L3R5 266 aa28.48■■■□□ 2.15
CBWD3-201ENST00000360171 TRPM2O94759 1503 aa28.46■■■□□ 2.15
CBWD3-201ENST00000360171 SIGLEC1Q9BZZ2 1709 aa28.45■■■□□ 2.14
CBWD3-201ENST00000360171 REREQ9P2R6 1566 aa28.45■■■□□ 2.14
CBWD3-201ENST00000360171 GGT6Q6P531 493 aa28.44■■■□□ 2.14
CBWD3-201ENST00000360171 ARHGEF40Q8TER5 1519 aa28.43■■■□□ 2.14
CBWD3-201ENST00000360171 PTPRTO14522 1441 aa28.43■■■□□ 2.14
CBWD3-201ENST00000360171 ABCC3O15438 1527 aa28.43■■■□□ 2.14
CBWD3-201ENST00000360171 CLTCL1P53675 1640 aa28.41■■■□□ 2.14
CBWD3-201ENST00000360171 NBPF8Q3BBV2 869 aa28.4■■■□□ 2.14
CBWD3-201ENST00000360171 CAMSAP1Q5T5Y3 1602 aa28.4■■■□□ 2.14
CBWD3-201ENST00000360171 ZC3H13Q5T200 1668 aaKnown RBP28.38■■■□□ 2.13
CBWD3-201ENST00000360171 CFAP65Q6ZU64 1925 aaKnown RBP28.36■■■□□ 2.13
CBWD3-201ENST00000360171 AGLP35573 1532 aa28.35■■■□□ 2.13
CBWD3-201ENST00000360171 TRHP20396 242 aaPredicted RBP28.35■■■□□ 2.13
CBWD3-201ENST00000360171 NPATQ14207 1427 aa28.33■■■□□ 2.13
CBWD3-201ENST00000360171 ANP32CO43423 234 aa28.33■■■□□ 2.13
CBWD3-201ENST00000360171 WASHC2CQ9Y4E1 1318 aa28.32■■■□□ 2.12
CBWD3-201ENST00000360171 UGGT1Q9NYU2 1555 aa28.32■■■□□ 2.12
CBWD3-201ENST00000360171 UHRF1BP1Q6BDS2 1440 aa28.31■■■□□ 2.12
CBWD3-201ENST00000360171 SPATA31E1Q6ZUB1 1445 aa28.3■■■□□ 2.12
CBWD3-201ENST00000360171 TSHZ2Q9NRE2 1034 aa28.28■■■□□ 2.12
CBWD3-201ENST00000360171 RGL3Q3MIN7 710 aa28.27■■■□□ 2.12
CBWD3-201ENST00000360171 DCAF11Q8TEB1 546 aa28.27■■■□□ 2.12
CBWD3-201ENST00000360171 HIRIP3Q9BW71 556 aaPredicted RBP28.27■■■□□ 2.12
CBWD3-201ENST00000360171 KIF1BO60333 1816 aa28.26■■■□□ 2.11
CBWD3-201ENST00000360171 ZNF326Q5BKZ1 582 aaKnown RBP28.25■■■□□ 2.11
CBWD3-201ENST00000360171 KDM2AQ9Y2K7 1162 aa28.24■■■□□ 2.11
CBWD3-201ENST00000360171 MROH2AA6NES4 1674 aa28.22■■■□□ 2.11
CBWD3-201ENST00000360171 RALGAPBQ86X10 1494 aa28.21■■■□□ 2.11
CBWD3-201ENST00000360171 ARHGAP31Q2M1Z3 1444 aa28.21■■■□□ 2.11
CBWD3-201ENST00000360171 NEURL4Q96JN8 1562 aa28.21■■■□□ 2.11
CBWD3-201ENST00000360171 CLTCQ00610 1675 aaKnown RBP28.21■■■□□ 2.11
CBWD3-201ENST00000360171 SYNMO15061 1565 aa28.2■■■□□ 2.1
CBWD3-201ENST00000360171 TRPM1Q7Z4N2 1603 aa28.19■■■□□ 2.1
CBWD3-201ENST00000360171 PRAG1Q86YV5 1406 aa28.19■■■□□ 2.1
CBWD3-201ENST00000360171 CNTLNQ9NXG0 1405 aa28.19■■■□□ 2.1
CBWD3-201ENST00000360171 NOS1P29475 1434 aa28.19■■■□□ 2.1
CBWD3-201ENST00000360171 PREX1Q8TCU6 1659 aa28.18■■■□□ 2.1
CBWD3-201ENST00000360171 PIK3C2BO00750 1634 aa28.16■■■□□ 2.1
CBWD3-201ENST00000360171 HSPA5P11021 654 aaKnown RBP28.16■■■□□ 2.1
CBWD3-201ENST00000360171 FKBP8Q14318 412 aa28.14■■■□□ 2.1
CBWD3-201ENST00000360171 IFT172Q9UG01 1749 aa28.14■■■□□ 2.1
CBWD3-201ENST00000360171 ADGRB3O60242 1522 aa28.14■■■□□ 2.09
CBWD3-201ENST00000360171 EIF4G2P78344 907 aaKnown RBP eCLIP28.13■■■□□ 2.09
CBWD3-201ENST00000360171 MADDQ8WXG6 1647 aa28.13■■■□□ 2.09
CBWD3-201ENST00000360171 NEFLP07196 543 aa28.12■■■□□ 2.09
CBWD3-201ENST00000360171 MLECQ14165 292 aa28.12■■■□□ 2.09
CBWD3-201ENST00000360171 PPP6R1Q9UPN7 881 aa28.09■■■□□ 2.09
CBWD3-201ENST00000360171 USP47Q96K76 1375 aa28.04■■■□□ 2.08
CBWD3-201ENST00000360171 ERVK-7P63135 1459 aa28.04■■■□□ 2.08
CBWD3-201ENST00000360171 PPLO60437 1756 aa28.04■■■□□ 2.08
CBWD3-201ENST00000360171 LAMC1P11047 1609 aa28.03■■■□□ 2.08
CBWD3-201ENST00000360171 ROCK2O75116 1388 aaKnown RBP28.03■■■□□ 2.08
CBWD3-201ENST00000360171 POLR1AO95602 1720 aaPredicted RBP28.02■■■□□ 2.08
CBWD3-201ENST00000360171 MYO5BQ9ULV0 1848 aa28.02■■■□□ 2.08
CBWD3-201ENST00000360171 ARID4BQ4LE39 1312 aaPredicted RBP28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms