RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 FXR2P51116 673 aaKnown RBP eCLIP10.44□□□□□ -0.74
CCDC196-201ENST00000359454 DIP2CQ9Y2E4 1556 aa10.43□□□□□ -0.74
CCDC196-201ENST00000359454 PRKAR2AP13861 404 aaKnown RBP10.43□□□□□ -0.74
CCDC196-201ENST00000359454 PKD2Q13563 968 aa10.43□□□□□ -0.74
CCDC196-201ENST00000359454 STRCQ7RTU9 1775 aa10.43□□□□□ -0.74
CCDC196-201ENST00000359454 MLH3Q9UHC1 1453 aa10.42□□□□□ -0.74
CCDC196-201ENST00000359454 PTPRTO14522 1441 aa10.42□□□□□ -0.74
CCDC196-201ENST00000359454 ESF1Q9H501 851 aaKnown RBP10.42□□□□□ -0.74
CCDC196-201ENST00000359454 AGLP35573 1532 aa10.42□□□□□ -0.74
CCDC196-201ENST00000359454 DISP3Q9P2K9 1392 aa10.41□□□□□ -0.74
CCDC196-201ENST00000359454 SETD1BQ9UPS6 1966 aaKnown RBP10.41□□□□□ -0.74
CCDC196-201ENST00000359454 NUBP1P53384 320 aa10.41□□□□□ -0.74
CCDC196-201ENST00000359454 CIZ1Q9ULV3 898 aaPredicted RBP10.41□□□□□ -0.74
CCDC196-201ENST00000359454 PIP4P2Q8N4L2 257 aa10.4□□□□□ -0.74
CCDC196-201ENST00000359454 TRAPPC8Q9Y2L5 1435 aa10.4□□□□□ -0.75
CCDC196-201ENST00000359454 ABCA6Q8N139 1617 aa10.4□□□□□ -0.75
CCDC196-201ENST00000359454 C3P01024 1663 aa10.39□□□□□ -0.75
CCDC196-201ENST00000359454 CNTLNQ9NXG0 1405 aa10.39□□□□□ -0.75
CCDC196-201ENST00000359454 CDC42BPBQ9Y5S2 1711 aa10.38□□□□□ -0.75
CCDC196-201ENST00000359454 ABCC1P33527 1531 aa10.38□□□□□ -0.75
CCDC196-201ENST00000359454 PREX2Q70Z35 1606 aa10.38□□□□□ -0.75
CCDC196-201ENST00000359454 SOCS7O14512 581 aa10.38□□□□□ -0.75
CCDC196-201ENST00000359454 FARP1Q9Y4F1 1045 aaPredicted RBP10.38□□□□□ -0.75
CCDC196-201ENST00000359454 CCDC18Q5T9S5 1454 aa10.37□□□□□ -0.75
CCDC196-201ENST00000359454 ILDR2Q71H61 639 aa10.37□□□□□ -0.75
CCDC196-201ENST00000359454 LRRIQ1Q96JM4 1722 aa10.37□□□□□ -0.75
CCDC196-201ENST00000359454 ITSN2Q9NZM3 1697 aa10.37□□□□□ -0.75
CCDC196-201ENST00000359454 IQSEC2Q5JU85 1478 aa10.36□□□□□ -0.75
CCDC196-201ENST00000359454 NCOA1Q15788 1441 aa10.36□□□□□ -0.75
CCDC196-201ENST00000359454 CASKIN1Q8WXD9 1431 aa10.36□□□□□ -0.75
CCDC196-201ENST00000359454 ECM2O94769 699 aaPredicted RBP10.36□□□□□ -0.75
CCDC196-201ENST00000359454 GSE1Q14687 1217 aa10.36□□□□□ -0.75
CCDC196-201ENST00000359454 LTBP4Q8N2S1 1624 aa10.36□□□□□ -0.75
CCDC196-201ENST00000359454 DCAF8Q5TAQ9 597 aa10.35□□□□□ -0.75
CCDC196-201ENST00000359454 FAM212AQ96EL1 285 aa10.35□□□□□ -0.75
CCDC196-201ENST00000359454 KIDINS220Q9ULH0 1771 aa10.34□□□□□ -0.75
CCDC196-201ENST00000359454 NPATQ14207 1427 aa10.34□□□□□ -0.75
CCDC196-201ENST00000359454 RASEFQ8IZ41 740 aa10.33□□□□□ -0.76
CCDC196-201ENST00000359454 SPATA31D1Q6ZQQ2 1576 aa10.33□□□□□ -0.76
CCDC196-201ENST00000359454 SPAG9O60271 1321 aaKnown RBP10.33□□□□□ -0.76
CCDC196-201ENST00000359454 MROH2AA6NES4 1674 aa10.32□□□□□ -0.76
CCDC196-201ENST00000359454 SAMD9LQ8IVG5 1584 aa10.32□□□□□ -0.76
CCDC196-201ENST00000359454 ZMYM3Q14202 1370 aa10.32□□□□□ -0.76
CCDC196-201ENST00000359454 ZNF777Q9ULD5 760 aaPredicted RBP10.32□□□□□ -0.76
CCDC196-201ENST00000359454 CDC42BPAQ5VT25 1732 aa10.32□□□□□ -0.76
CCDC196-201ENST00000359454 CAMSAP1Q5T5Y3 1602 aa10.32□□□□□ -0.76
CCDC196-201ENST00000359454 GPATCH8Q9UKJ3 1502 aaKnown RBP10.3□□□□□ -0.76
CCDC196-201ENST00000359454 NCKAP5LQ9HCH0 1330 aa10.3□□□□□ -0.76
CCDC196-201ENST00000359454 FYCO1Q9BQS8 1478 aa10.3□□□□□ -0.76
CCDC196-201ENST00000359454 SYCP2Q9BX26 1530 aa10.29□□□□□ -0.76
CCDC196-201ENST00000359454 HNRNPMP52272 730 aaKnown RBP eCLIP10.29□□□□□ -0.76
CCDC196-201ENST00000359454 KIAA1107Q9UPP5 1409 aa10.29□□□□□ -0.76
CCDC196-201ENST00000359454 PLEKHH2Q8IVE3 1493 aa10.29□□□□□ -0.76
CCDC196-201ENST00000359454 ATP7AQ04656 1500 aa10.28□□□□□ -0.76
CCDC196-201ENST00000359454 A2MP01023 1474 aa10.28□□□□□ -0.76
CCDC196-201ENST00000359454 PLA2R1Q13018 1463 aa10.28□□□□□ -0.76
CCDC196-201ENST00000359454 SUPT6HQ7KZ85 1726 aaKnown RBP10.27□□□□□ -0.76
CCDC196-201ENST00000359454 UBAP1LF5GYI3 381 aa10.27□□□□□ -0.77
CCDC196-201ENST00000359454 CFDP1Q9UEE9 299 aaPredicted RBP10.27□□□□□ -0.77
CCDC196-201ENST00000359454 CLTCQ00610 1675 aaKnown RBP10.27□□□□□ -0.77
CCDC196-201ENST00000359454 ZNF335Q9H4Z2 1342 aaPredicted RBP10.27□□□□□ -0.77
CCDC196-201ENST00000359454 PLXNC1O60486 1568 aa10.26□□□□□ -0.77
CCDC196-201ENST00000359454 PTPRKQ15262 1439 aa10.26□□□□□ -0.77
CCDC196-201ENST00000359454 ZNF142P52746 1687 aaPredicted RBP10.26□□□□□ -0.77
CCDC196-201ENST00000359454 GGT6Q6P531 493 aa10.26□□□□□ -0.77
CCDC196-201ENST00000359454 INO80Q9ULG1 1556 aaPredicted RBP10.26□□□□□ -0.77
CCDC196-201ENST00000359454 CEP170BQ9Y4F5 1589 aaPredicted RBP10.26□□□□□ -0.77
CCDC196-201ENST00000359454 CCNB3Q8WWL7 1395 aa10.26□□□□□ -0.77
CCDC196-201ENST00000359454 MYO3AQ8NEV4 1616 aa10.25□□□□□ -0.77
CCDC196-201ENST00000359454 TCOF1Q13428 1488 aaKnown RBP10.25□□□□□ -0.77
CCDC196-201ENST00000359454 TSPYL2Q9H2G4 693 aaPredicted RBP10.25□□□□□ -0.77
CCDC196-201ENST00000359454 RGL2O15211 777 aa10.24□□□□□ -0.77
CCDC196-201ENST00000359454 ADGBQ8N7X0 1667 aa10.22□□□□□ -0.77
CCDC196-201ENST00000359454 MTUS2Q5JR59 1369 aa10.22□□□□□ -0.77
CCDC196-201ENST00000359454 A2ML1A8K2U0 1454 aa10.22□□□□□ -0.77
CCDC196-201ENST00000359454 PAK3O75914 559 aaPredicted RBP10.21□□□□□ -0.77
CCDC196-201ENST00000359454 RTEL1-TNFRSF6BF6WH68 1400 aa10.21□□□□□ -0.78
CCDC196-201ENST00000359454 DNMT1P26358 1616 aaKnown RBP10.19□□□□□ -0.78
CCDC196-201ENST00000359454 MBD5Q9P267 1494 aa10.19□□□□□ -0.78
CCDC196-201ENST00000359454 DHX29Q7Z478 1369 aaKnown RBP10.19□□□□□ -0.78
CCDC196-201ENST00000359454 ZNF644Q9H582 1327 aaPredicted RBP10.19□□□□□ -0.78
CCDC196-201ENST00000359454 CPS1P31327 1500 aa10.18□□□□□ -0.78
CCDC196-201ENST00000359454 TNRQ92752 1358 aa10.18□□□□□ -0.78
CCDC196-201ENST00000359454 TOM1O60784 492 aa10.18□□□□□ -0.78
CCDC196-201ENST00000359454 PYGBP11216 843 aa10.18□□□□□ -0.78
CCDC196-201ENST00000359454 TIAM1Q13009 1591 aa10.18□□□□□ -0.78
CCDC196-201ENST00000359454 FAM135AQ9P2D6 1515 aa10.17□□□□□ -0.78
CCDC196-201ENST00000359454 CHRM1P11229 460 aaPredicted RBP10.17□□□□□ -0.78
CCDC196-201ENST00000359454 EHBP1L1Q8N3D4 1523 aa10.17□□□□□ -0.78
CCDC196-201ENST00000359454 PZPP20742 1482 aa10.17□□□□□ -0.78
CCDC196-201ENST00000359454 SHANK2Q9UPX8 1470 aa10.17□□□□□ -0.78
CCDC196-201ENST00000359454 KIF3BO15066 747 aa10.16□□□□□ -0.78
CCDC196-201ENST00000359454 HSPA1LP34931 641 aa10.16□□□□□ -0.78
CCDC196-201ENST00000359454 PIP4K2BP78356 416 aa10.16□□□□□ -0.78
CCDC196-201ENST00000359454 RSPH4AQ5TD94 716 aa10.16□□□□□ -0.78
CCDC196-201ENST00000359454 FBXO31Q5XUX0 539 aaPredicted RBP10.16□□□□□ -0.78
CCDC196-201ENST00000359454 ANKLE2Q86XL3 938 aa10.16□□□□□ -0.78
CCDC196-201ENST00000359454 POLR1AO95602 1720 aaPredicted RBP10.16□□□□□ -0.78
CCDC196-201ENST00000359454 CEP162Q5TB80 1403 aa10.16□□□□□ -0.78
CCDC196-201ENST00000359454 NEURL4Q96JN8 1562 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms