RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 CCDC141Q6ZP82 1450 aa14.81□□□□□ -0.04
SSU72-202ENST00000359060 DNMT1P26358 1616 aaKnown RBP14.81□□□□□ -0.04
SSU72-202ENST00000359060 CEP170Q5SW79 1584 aa14.8□□□□□ -0.04
SSU72-202ENST00000359060 NUP160Q12769 1436 aa14.8□□□□□ -0.04
SSU72-202ENST00000359060 RCAN3Q9UKA8 241 aa14.79□□□□□ -0.04
SSU72-202ENST00000359060 LRRIQ1Q96JM4 1722 aa14.79□□□□□ -0.04
SSU72-202ENST00000359060 PZPP20742 1482 aa14.79□□□□□ -0.04
SSU72-202ENST00000359060 NEUROD2Q15784 382 aa14.78□□□□□ -0.04
SSU72-202ENST00000359060 RTL5Q5HYW3 569 aaPredicted RBP14.78□□□□□ -0.04
SSU72-202ENST00000359060 GCC2Q8IWJ2 1684 aa14.77□□□□□ -0.05
SSU72-202ENST00000359060 SAFB2Q14151 953 aaKnown RBP eCLIP14.77□□□□□ -0.05
SSU72-202ENST00000359060 ITSN2Q9NZM3 1697 aa14.76□□□□□ -0.05
SSU72-202ENST00000359060 NUTM2DQ5VT03 806 aaPredicted RBP14.76□□□□□ -0.05
SSU72-202ENST00000359060 PNISRQ8TF01 805 aaKnown RBP14.76□□□□□ -0.05
SSU72-202ENST00000359060 NBR1Q14596 966 aa14.74□□□□□ -0.05
SSU72-202ENST00000359060 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.74□□□□□ -0.05
SSU72-202ENST00000359060 TEX14Q8IWB6 1497 aa14.74□□□□□ -0.05
SSU72-202ENST00000359060 PLEKHH2Q8IVE3 1493 aa14.73□□□□□ -0.05
SSU72-202ENST00000359060 TRAK1Q9UPV9 953 aa14.72□□□□□ -0.05
SSU72-202ENST00000359060 DENND4BO75064 1496 aaPredicted RBP14.71□□□□□ -0.05
SSU72-202ENST00000359060 CCDC146Q8IYE0 955 aa14.71□□□□□ -0.05
SSU72-202ENST00000359060 ZBTB47Q9UFB7 747 aaPredicted RBP14.71□□□□□ -0.05
SSU72-202ENST00000359060 PLIN1O60240 522 aa14.7□□□□□ -0.06
SSU72-202ENST00000359060 WASHC2CQ9Y4E1 1318 aa14.7□□□□□ -0.06
SSU72-202ENST00000359060 ESF1Q9H501 851 aaKnown RBP14.7□□□□□ -0.06
SSU72-202ENST00000359060 STK26Q9P289 416 aa14.7□□□□□ -0.06
SSU72-202ENST00000359060 BRD4O60885 1362 aaPredicted RBP14.69□□□□□ -0.06
SSU72-202ENST00000359060 PLPPR3Q6T4P5 718 aa14.69□□□□□ -0.06
SSU72-202ENST00000359060 SCAPERQ9BY12 1400 aa14.69□□□□□ -0.06
SSU72-202ENST00000359060 CFAP70Q5T0N1 1121 aa14.69□□□□□ -0.06
SSU72-202ENST00000359060 EXOC6Q8TAG9 804 aa14.69□□□□□ -0.06
SSU72-202ENST00000359060 CDCA7LQ96GN5 454 aa14.68□□□□□ -0.06
SSU72-202ENST00000359060 SYCP2Q9BX26 1530 aa14.68□□□□□ -0.06
SSU72-202ENST00000359060 MORC1Q86VD1 984 aa14.67□□□□□ -0.06
SSU72-202ENST00000359060 OSCARQ8IYS5 282 aa14.67□□□□□ -0.06
SSU72-202ENST00000359060 ADGRL2O95490 1459 aa14.67□□□□□ -0.06
SSU72-202ENST00000359060 EIF3AQ14152 1382 aaKnown RBP14.67□□□□□ -0.06
SSU72-202ENST00000359060 PDE3BQ13370 1112 aa14.67□□□□□ -0.06
SSU72-202ENST00000359060 RRP1P56182 461 aaKnown RBP14.66□□□□□ -0.06
SSU72-202ENST00000359060 SLC24A1O60721 1099 aa14.66□□□□□ -0.06
SSU72-202ENST00000359060 BCL11AQ9H165 835 aa14.65□□□□□ -0.06
SSU72-202ENST00000359060 NEFMP07197 916 aa14.65□□□□□ -0.06
SSU72-202ENST00000359060 MLECQ14165 292 aa14.64□□□□□ -0.07
SSU72-202ENST00000359060 POGKQ9P215 609 aa14.64□□□□□ -0.07
SSU72-202ENST00000359060 CFAP53Q96M91 514 aa14.64□□□□□ -0.07
SSU72-202ENST00000359060 ADAMTS8Q9UP79 889 aa14.64□□□□□ -0.07
SSU72-202ENST00000359060 RALGAPBQ86X10 1494 aa14.63□□□□□ -0.07
SSU72-202ENST00000359060 SPATA31E1Q6ZUB1 1445 aa14.63□□□□□ -0.07
SSU72-202ENST00000359060 SRPK2P78362 688 aaKnown RBP14.63□□□□□ -0.07
SSU72-202ENST00000359060 FRAT1Q92837 279 aaPredicted RBP14.63□□□□□ -0.07
SSU72-202ENST00000359060 FAM135AQ9P2D6 1515 aa14.63□□□□□ -0.07
SSU72-202ENST00000359060 ERBINQ96RT1 1412 aa14.63□□□□□ -0.07
SSU72-202ENST00000359060 ABCC10Q5T3U5 1492 aa14.62□□□□□ -0.07
SSU72-202ENST00000359060 SHANK2Q9UPX8 1470 aa14.62□□□□□ -0.07
SSU72-202ENST00000359060 GOLGA2Q08379 1002 aa14.62□□□□□ -0.07
SSU72-202ENST00000359060 DHX29Q7Z478 1369 aaKnown RBP14.62□□□□□ -0.07
SSU72-202ENST00000359060 PPM1GO15355 546 aaPredicted RBP14.62□□□□□ -0.07
SSU72-202ENST00000359060 RGS3P49796 1198 aa14.62□□□□□ -0.07
SSU72-202ENST00000359060 TMEM132EQ6IEE7 984 aa14.62□□□□□ -0.07
SSU72-202ENST00000359060 SMG6Q86US8 1419 aaKnown RBP14.61□□□□□ -0.07
SSU72-202ENST00000359060 KDM5BQ9UGL1 1544 aa14.61□□□□□ -0.07
SSU72-202ENST00000359060 ABCA8O94911 1581 aa14.61□□□□□ -0.07
SSU72-202ENST00000359060 NOP58Q9Y2X3 529 aaKnown RBP14.6□□□□□ -0.07
SSU72-202ENST00000359060 U2SURPO15042 1029 aaKnown RBP14.6□□□□□ -0.07
SSU72-202ENST00000359060 APAF1O14727 1248 aa14.6□□□□□ -0.07
SSU72-202ENST00000359060 DISP3Q9P2K9 1392 aa14.6□□□□□ -0.07
SSU72-202ENST00000359060 TRAPPC8Q9Y2L5 1435 aa14.59□□□□□ -0.07
SSU72-202ENST00000359060 CYB5RLQ6IPT4 315 aa14.59□□□□□ -0.07
SSU72-202ENST00000359060 PPP2R1AP30153 589 aa14.59□□□□□ -0.07
SSU72-202ENST00000359060 PLCH2O75038 1416 aa14.58□□□□□ -0.07
SSU72-202ENST00000359060 MBD5Q9P267 1494 aa14.58□□□□□ -0.08
SSU72-202ENST00000359060 PRAG1Q86YV5 1406 aa14.58□□□□□ -0.08
SSU72-202ENST00000359060 CRBNQ96SW2 442 aa14.58□□□□□ -0.08
SSU72-202ENST00000359060 RRP7AQ9Y3A4 280 aaKnown RBP14.57□□□□□ -0.08
SSU72-202ENST00000359060 STAC3Q96MF2 364 aa14.57□□□□□ -0.08
SSU72-202ENST00000359060 ADGBQ8N7X0 1667 aa14.57□□□□□ -0.08
SSU72-202ENST00000359060 RAPGEF3O95398 923 aa14.56□□□□□ -0.08
SSU72-202ENST00000359060 CENPJQ9HC77 1338 aaPredicted RBP14.56□□□□□ -0.08
SSU72-202ENST00000359060 U2AF1L5P0DN76 240 aaPredicted RBP14.55□□□□□ -0.08
SSU72-202ENST00000359060 U2AF1Q01081 240 aaKnown RBP eCLIP14.55□□□□□ -0.08
SSU72-202ENST00000359060 UHRF1BP1Q6BDS2 1440 aa14.55□□□□□ -0.08
SSU72-202ENST00000359060 TESK2Q96S53 571 aa14.55□□□□□ -0.08
SSU72-202ENST00000359060 FANCIQ9NVI1 1328 aa14.54□□□□□ -0.08
SSU72-202ENST00000359060 ARHGEF12Q9NZN5 1544 aa14.53□□□□□ -0.08
SSU72-202ENST00000359060 TCERG1O14776 1098 aaKnown RBP14.53□□□□□ -0.08
SSU72-202ENST00000359060 ADGRF5Q8IZF2 1346 aa14.53□□□□□ -0.08
SSU72-202ENST00000359060 ABCC2Q92887 1545 aa14.53□□□□□ -0.08
SSU72-202ENST00000359060 LAS1LQ9Y4W2 734 aaKnown RBP14.52□□□□□ -0.08
SSU72-202ENST00000359060 FANCAO15360 1455 aa14.52□□□□□ -0.08
SSU72-202ENST00000359060 ADGRL1O94910 1474 aa14.52□□□□□ -0.08
SSU72-202ENST00000359060 DUOX2Q9NRD8 1548 aa14.52□□□□□ -0.09
SSU72-202ENST00000359060 VGFO15240 615 aaPredicted RBP14.52□□□□□ -0.09
SSU72-202ENST00000359060 SLC12A5Q9H2X9 1139 aa14.52□□□□□ -0.09
SSU72-202ENST00000359060 CDC42BPAQ5VT25 1732 aa14.51□□□□□ -0.09
SSU72-202ENST00000359060 MAPK8IP3Q9UPT6 1336 aa14.51□□□□□ -0.09
SSU72-202ENST00000359060 SAMD9LQ8IVG5 1584 aa14.5□□□□□ -0.09
SSU72-202ENST00000359060 A2MP01023 1474 aa14.5□□□□□ -0.09
SSU72-202ENST00000359060 PER1O15534 1290 aaPredicted RBP14.5□□□□□ -0.09
SSU72-202ENST00000359060 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.49□□□□□ -0.097e-35■■■■□ 23.6
SSU72-202ENST00000359060 MINK1Q8N4C8 1332 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms