RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 DHX29Q7Z478 1369 aaKnown RBP24.9■■□□□ 1.58
TPM1-205ENST00000357980 MYT1LQ9UL68 1186 aa24.87■■□□□ 1.57
TPM1-205ENST00000357980 ANKRD30BQ9BXX2 1392 aa24.86■■□□□ 1.57
TPM1-205ENST00000357980 A2MP01023 1474 aa24.86■■□□□ 1.57
TPM1-205ENST00000357980 DIP2CQ9Y2E4 1556 aa24.86■■□□□ 1.57
TPM1-205ENST00000357980 FOXD1Q16676 465 aa24.85■■□□□ 1.57
TPM1-205ENST00000357980 BCORL1Q5H9F3 1711 aa24.84■■□□□ 1.57
TPM1-205ENST00000357980 NEUROD1Q13562 356 aa24.83■■□□□ 1.57
TPM1-205ENST00000357980 MROH1Q8NDA8 1641 aa24.83■■□□□ 1.56
TPM1-205ENST00000357980 PKD2Q13563 968 aa24.82■■□□□ 1.56
TPM1-205ENST00000357980 PRDM15P57071 1507 aaPredicted RBP24.81■■□□□ 1.56
TPM1-205ENST00000357980 RNF17Q9BXT8 1623 aaKnown RBP24.81■■□□□ 1.56
TPM1-205ENST00000357980 VWDEQ8N2E2 1590 aa24.81■■□□□ 1.56
TPM1-205ENST00000357980 TIMELESSQ9UNS1 1208 aa24.8■■□□□ 1.56
TPM1-205ENST00000357980 COL17A1Q9UMD9 1497 aaPredicted RBP24.79■■□□□ 1.56
TPM1-205ENST00000357980 YEATS2Q9ULM3 1422 aa24.78■■□□□ 1.56
TPM1-205ENST00000357980 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.77■■□□□ 1.569e-7■■■□□ 19
TPM1-205ENST00000357980 RPRD2Q5VT52 1461 aaKnown RBP24.76■■□□□ 1.55
TPM1-205ENST00000357980 KIF3BO15066 747 aa24.75■■□□□ 1.55
TPM1-205ENST00000357980 TET3O43151 1660 aa24.73■■□□□ 1.55
TPM1-205ENST00000357980 TONSLQ96HA7 1378 aa24.72■■□□□ 1.55
TPM1-205ENST00000357980 E9PCH4 1651 aa24.71■■□□□ 1.55
TPM1-205ENST00000357980 REREQ9P2R6 1566 aa24.7■■□□□ 1.55
TPM1-205ENST00000357980 KANK1Q14678 1352 aa24.69■■□□□ 1.54
TPM1-205ENST00000357980 ARHGEF40Q8TER5 1519 aa24.68■■□□□ 1.54
TPM1-205ENST00000357980 ATP10AO60312 1499 aa24.68■■□□□ 1.54
TPM1-205ENST00000357980 LMTK2Q8IWU2 1503 aa24.67■■□□□ 1.54
TPM1-205ENST00000357980 PLA2R1Q13018 1463 aa24.66■■□□□ 1.54
TPM1-205ENST00000357980 CEP152O94986 1710 aa24.66■■□□□ 1.54
TPM1-205ENST00000357980 TRHP20396 242 aaPredicted RBP24.63■■□□□ 1.53
TPM1-205ENST00000357980 EFCAB6Q5THR3 1501 aa24.63■■□□□ 1.53
TPM1-205ENST00000357980 PPP1R15AO75807 674 aaPredicted RBP24.63■■□□□ 1.53
TPM1-205ENST00000357980 AGLP35573 1532 aa24.61■■□□□ 1.53
TPM1-205ENST00000357980 SPHKAPQ2M3C7 1700 aa24.61■■□□□ 1.53
TPM1-205ENST00000357980 SIGLEC1Q9BZZ2 1709 aa24.61■■□□□ 1.53
TPM1-205ENST00000357980 ABCC3O15438 1527 aa24.59■■□□□ 1.53
TPM1-205ENST00000357980 ZC3H13Q5T200 1668 aaKnown RBP24.58■■□□□ 1.53
TPM1-205ENST00000357980 TRPM2O94759 1503 aa24.57■■□□□ 1.52
TPM1-205ENST00000357980 CCDC144AA2RUR9 1427 aa24.57■■□□□ 1.52
TPM1-205ENST00000357980 PTPRTO14522 1441 aa24.57■■□□□ 1.52
TPM1-205ENST00000357980 L3MBTL2Q969R5 705 aa24.56■■□□□ 1.52
TPM1-205ENST00000357980 GGT6Q6P531 493 aa24.56■■□□□ 1.52
TPM1-205ENST00000357980 CAMSAP1Q5T5Y3 1602 aa24.55■■□□□ 1.52
TPM1-205ENST00000357980 CLTCL1P53675 1640 aa24.49■■□□□ 1.51
TPM1-205ENST00000357980 NPATQ14207 1427 aa24.49■■□□□ 1.51
TPM1-205ENST00000357980 WASHC2CQ9Y4E1 1318 aa24.49■■□□□ 1.51
TPM1-205ENST00000357980 ZNF316A6NFI3 1004 aaPredicted RBP24.45■■□□□ 1.5
TPM1-205ENST00000357980 ARHGAP31Q2M1Z3 1444 aa24.45■■□□□ 1.5
TPM1-205ENST00000357980 SPATA31E1Q6ZUB1 1445 aa24.42■■□□□ 1.5
TPM1-205ENST00000357980 CFAP65Q6ZU64 1925 aaKnown RBP24.42■■□□□ 1.5
TPM1-205ENST00000357980 PPP6R1Q9UPN7 881 aa24.41■■□□□ 1.5
TPM1-205ENST00000357980 NEURL4Q96JN8 1562 aa24.41■■□□□ 1.5
TPM1-205ENST00000357980 UGGT1Q9NYU2 1555 aa24.4■■□□□ 1.5
TPM1-205ENST00000357980 UHRF1BP1Q6BDS2 1440 aa24.39■■□□□ 1.5
TPM1-205ENST00000357980 CNTLNQ9NXG0 1405 aa24.39■■□□□ 1.5
TPM1-205ENST00000357980 NOS1P29475 1434 aa24.38■■□□□ 1.49
TPM1-205ENST00000357980 CLTCQ00610 1675 aaKnown RBP24.38■■□□□ 1.49
TPM1-205ENST00000357980 NBPF8Q3BBV2 869 aa24.38■■□□□ 1.49
TPM1-205ENST00000357980 KIF1BO60333 1816 aa24.37■■□□□ 1.49
TPM1-205ENST00000357980 SYNMO15061 1565 aa24.36■■□□□ 1.49
TPM1-205ENST00000357980 PREX1Q8TCU6 1659 aa24.36■■□□□ 1.49
TPM1-205ENST00000357980 PIK3C2BO00750 1634 aa24.35■■□□□ 1.49
TPM1-205ENST00000357980 MROH2AA6NES4 1674 aa24.32■■□□□ 1.48
TPM1-205ENST00000357980 RGL3Q3MIN7 710 aa24.31■■□□□ 1.48
TPM1-205ENST00000357980 DCAF11Q8TEB1 546 aa24.31■■□□□ 1.48
TPM1-205ENST00000357980 ADGRB3O60242 1522 aa24.3■■□□□ 1.48
TPM1-205ENST00000357980 MLECQ14165 292 aa24.29■■□□□ 1.48
TPM1-205ENST00000357980 PRAG1Q86YV5 1406 aa24.28■■□□□ 1.48
TPM1-205ENST00000357980 RALGAPBQ86X10 1494 aa24.28■■□□□ 1.48
TPM1-205ENST00000357980 IFT172Q9UG01 1749 aa24.27■■□□□ 1.48
TPM1-205ENST00000357980 ERVK-7P63135 1459 aa24.26■■□□□ 1.47
TPM1-205ENST00000357980 KDM2AQ9Y2K7 1162 aa24.26■■□□□ 1.47
TPM1-205ENST00000357980 TRPM1Q7Z4N2 1603 aa24.26■■□□□ 1.47
TPM1-205ENST00000357980 ARID4BQ4LE39 1312 aaPredicted RBP24.26■■□□□ 1.47
TPM1-205ENST00000357980 SPATA31D1Q6ZQQ2 1576 aa24.24■■□□□ 1.47
TPM1-205ENST00000357980 ZNF326Q5BKZ1 582 aaKnown RBP24.24■■□□□ 1.47
TPM1-205ENST00000357980 MADDQ8WXG6 1647 aa24.23■■□□□ 1.47
TPM1-205ENST00000357980 STAC3Q96MF2 364 aa24.19■■□□□ 1.46
TPM1-205ENST00000357980 PPLO60437 1756 aa24.19■■□□□ 1.46
TPM1-205ENST00000357980 FBXO31Q5XUX0 539 aaPredicted RBP24.19■■□□□ 1.46
TPM1-205ENST00000357980 SLC52A1Q9NWF4 448 aa24.19■■□□□ 1.46
TPM1-205ENST00000357980 MYOM2P54296 1465 aa24.19■■□□□ 1.46
TPM1-205ENST00000357980 ZMYM3Q14202 1370 aa24.18■■□□□ 1.46
TPM1-205ENST00000357980 FER1L4A9Z1Z3 1794 aa24.17■■□□□ 1.46
TPM1-205ENST00000357980 ESF1Q9H501 851 aaKnown RBP24.17■■□□□ 1.46
TPM1-205ENST00000357980 TMEM131LA2VDJ0 1609 aa24.16■■□□□ 1.46
TPM1-205ENST00000357980 MYO5BQ9ULV0 1848 aa24.16■■□□□ 1.46
TPM1-205ENST00000357980 EIF4G2P78344 907 aaKnown RBP eCLIP24.16■■□□□ 1.46
TPM1-205ENST00000357980 LAMC1P11047 1609 aa24.15■■□□□ 1.46
TPM1-205ENST00000357980 IDI1Q13907 227 aa24.15■■□□□ 1.46
TPM1-205ENST00000357980 HIRIP3Q9BW71 556 aaPredicted RBP24.15■■□□□ 1.46
TPM1-205ENST00000357980 HSPA5P11021 654 aaKnown RBP24.14■■□□□ 1.46
TPM1-205ENST00000357980 DIEXFQ68CQ4 756 aaKnown RBP24.14■■□□□ 1.45
TPM1-205ENST00000357980 NRXN1Q9ULB1 1477 aa24.13■■□□□ 1.45
TPM1-205ENST00000357980 GPRASP1Q5JY77 1395 aa24.13■■□□□ 1.45
TPM1-205ENST00000357980 KIAA1210Q9ULL0 1709 aa24.12■■□□□ 1.45
TPM1-205ENST00000357980 ROCK2O75116 1388 aaKnown RBP24.11■■□□□ 1.45
TPM1-205ENST00000357980 NEXMIFQ5QGS0 1516 aa24.11■■□□□ 1.45
TPM1-205ENST00000357980 USP47Q96K76 1375 aa24.11■■□□□ 1.45
TPM1-205ENST00000357980 CHGAP10645 457 aaKnown RBP24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms