RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 MRS2Q9HD23 443 aa21.84■■□□□ 1.09
PHTF1-201ENST00000357783 CCDC144AA2RUR9 1427 aa21.83■■□□□ 1.09
PHTF1-201ENST00000357783 EFCAB2Q5VUJ9 269 aa21.82■■□□□ 1.08
PHTF1-201ENST00000357783 DUOX2Q9NRD8 1548 aa21.81■■□□□ 1.08
PHTF1-201ENST00000357783 FAM9BQ8IZU0 186 aa21.81■■□□□ 1.08
PHTF1-201ENST00000357783 IQGAP3Q86VI3 1631 aa21.8■■□□□ 1.08
PHTF1-201ENST00000357783 ABCC1P33527 1531 aa21.8■■□□□ 1.08
PHTF1-201ENST00000357783 CNGB1Q14028 1251 aaPredicted RBP21.8■■□□□ 1.08
PHTF1-201ENST00000357783 DHX29Q7Z478 1369 aaKnown RBP21.79■■□□□ 1.08
PHTF1-201ENST00000357783 PLA2R1Q13018 1463 aa21.79■■□□□ 1.08
PHTF1-201ENST00000357783 TRAPPC8Q9Y2L5 1435 aa21.77■■□□□ 1.08
PHTF1-201ENST00000357783 RGL3Q3MIN7 710 aa21.77■■□□□ 1.08
PHTF1-201ENST00000357783 ROCK2O75116 1388 aaKnown RBP21.77■■□□□ 1.08
PHTF1-201ENST00000357783 ARID4BQ4LE39 1312 aaPredicted RBP21.76■■□□□ 1.07
PHTF1-201ENST00000357783 ST20-MTHFSA0A0A6YYL1 179 aa21.76■■□□□ 1.07
PHTF1-201ENST00000357783 ERBINQ96RT1 1412 aa21.76■■□□□ 1.07
PHTF1-201ENST00000357783 PRAG1Q86YV5 1406 aa21.74■■□□□ 1.07
PHTF1-201ENST00000357783 MAGI2Q86UL8 1455 aa21.73■■□□□ 1.07
PHTF1-201ENST00000357783 TRPM1Q7Z4N2 1603 aa21.73■■□□□ 1.07
PHTF1-201ENST00000357783 A2MP01023 1474 aa21.71■■□□□ 1.07
PHTF1-201ENST00000357783 SPAG9O60271 1321 aaKnown RBP21.69■■□□□ 1.06
PHTF1-201ENST00000357783 AFAP1Q8N556 730 aa21.69■■□□□ 1.06
PHTF1-201ENST00000357783 WDR7Q9Y4E6 1490 aa21.68■■□□□ 1.06
PHTF1-201ENST00000357783 TSHZ2Q9NRE2 1034 aa21.67■■□□□ 1.06
PHTF1-201ENST00000357783 ARAP3Q8WWN8 1544 aa21.67■■□□□ 1.06
PHTF1-201ENST00000357783 NBPF1Q3BBV0 1214 aa21.66■■□□□ 1.06
PHTF1-201ENST00000357783 ZFYVE16Q7Z3T8 1539 aa21.66■■□□□ 1.06
PHTF1-201ENST00000357783 ZBED9Q6R2W3 1325 aa21.65■■□□□ 1.06
PHTF1-201ENST00000357783 ATP10AO60312 1499 aa21.65■■□□□ 1.06
PHTF1-201ENST00000357783 IRX6P78412 446 aaPredicted RBP21.63■■□□□ 1.05
PHTF1-201ENST00000357783 RTEL1-TNFRSF6BF6WH68 1400 aa21.62■■□□□ 1.05
PHTF1-201ENST00000357783 FANCAO15360 1455 aa21.61■■□□□ 1.05
PHTF1-201ENST00000357783 E9PCH4 1651 aa21.61■■□□□ 1.05
PHTF1-201ENST00000357783 ABCA9Q8IUA7 1624 aa21.6■■□□□ 1.05
PHTF1-201ENST00000357783 GPRASP1Q5JY77 1395 aa21.6■■□□□ 1.05
PHTF1-201ENST00000357783 EIF2AK4Q9P2K8 1649 aaKnown RBP21.59■■□□□ 1.05
PHTF1-201ENST00000357783 LAMC1P11047 1609 aa21.58■■□□□ 1.04
PHTF1-201ENST00000357783 PRDM15P57071 1507 aaPredicted RBP21.57■■□□□ 1.04
PHTF1-201ENST00000357783 ATP7AQ04656 1500 aa21.57■■□□□ 1.04
PHTF1-201ENST00000357783 MYT1LQ9UL68 1186 aa21.56■■□□□ 1.04
PHTF1-201ENST00000357783 INO80Q9ULG1 1556 aaPredicted RBP21.56■■□□□ 1.04
PHTF1-201ENST00000357783 ASXL2Q76L83 1435 aa21.55■■□□□ 1.04
PHTF1-201ENST00000357783 DEPDC5O75140 1603 aa21.55■■□□□ 1.04
PHTF1-201ENST00000357783 ADGRL1O94910 1474 aa21.54■■□□□ 1.04
PHTF1-201ENST00000357783 TMC1Q8TDI8 760 aa21.54■■□□□ 1.04
PHTF1-201ENST00000357783 SCAPERQ9BY12 1400 aa21.53■■□□□ 1.04
PHTF1-201ENST00000357783 SPHKAPQ2M3C7 1700 aa21.53■■□□□ 1.04
PHTF1-201ENST00000357783 TRPM2O94759 1503 aa21.52■■□□□ 1.04
PHTF1-201ENST00000357783 COL17A1Q9UMD9 1497 aaPredicted RBP21.52■■□□□ 1.04
PHTF1-201ENST00000357783 DISP3Q9P2K9 1392 aa21.51■■□□□ 1.03
PHTF1-201ENST00000357783 PNISRQ8TF01 805 aaKnown RBP21.51■■□□□ 1.03
PHTF1-201ENST00000357783 TESK2Q96S53 571 aa21.5■■□□□ 1.03
PHTF1-201ENST00000357783 RNF17Q9BXT8 1623 aaKnown RBP21.5■■□□□ 1.03
PHTF1-201ENST00000357783 TET3O43151 1660 aa21.5■■□□□ 1.03
PHTF1-201ENST00000357783 MYBBP1AQ9BQG0 1328 aaKnown RBP21.5■■□□□ 1.03
PHTF1-201ENST00000357783 RALBP1Q15311 655 aa21.49■■□□□ 1.03
PHTF1-201ENST00000357783 CEP152O94986 1710 aa21.49■■□□□ 1.03
PHTF1-201ENST00000357783 SENP3-EIF4A1A0A087X0R7 540 aa21.49■■□□□ 1.03
PHTF1-201ENST00000357783 KIF3BO15066 747 aa21.49■■□□□ 1.03
PHTF1-201ENST00000357783 CLTCL1P53675 1640 aa21.49■■□□□ 1.03
PHTF1-201ENST00000357783 KANK1Q14678 1352 aa21.48■■□□□ 1.03
PHTF1-201ENST00000357783 KTN1Q86UP2 1357 aaKnown RBP21.48■■□□□ 1.03
PHTF1-201ENST00000357783 MADDQ8WXG6 1647 aa21.48■■□□□ 1.03
PHTF1-201ENST00000357783 PTPRTO14522 1441 aa21.47■■□□□ 1.03
PHTF1-201ENST00000357783 BRD4O60885 1362 aaPredicted RBP21.46■■□□□ 1.03
PHTF1-201ENST00000357783 VWDEQ8N2E2 1590 aa21.45■■□□□ 1.02
PHTF1-201ENST00000357783 TMF1P82094 1093 aa21.43■■□□□ 1.02
PHTF1-201ENST00000357783 SMG6Q86US8 1419 aaKnown RBP21.43■■□□□ 1.02
PHTF1-201ENST00000357783 OSCARQ8IYS5 282 aa21.42■■□□□ 1.02
PHTF1-201ENST00000357783 PARD3Q8TEW0 1356 aa21.42■■□□□ 1.02
PHTF1-201ENST00000357783 MROH1Q8NDA8 1641 aa21.42■■□□□ 1.02
PHTF1-201ENST00000357783 NPM1P06748 294 aaKnown RBP eCLIP21.42■■□□□ 1.02
PHTF1-201ENST00000357783 LRPPRCP42704 1394 aaKnown RBP21.42■■□□□ 1.02
PHTF1-201ENST00000357783 PER1O15534 1290 aaPredicted RBP21.42■■□□□ 1.02
PHTF1-201ENST00000357783 KIDINS220Q9ULH0 1771 aa21.41■■□□□ 1.02
PHTF1-201ENST00000357783 ERICH6BQ5W0A0 696 aa21.41■■□□□ 1.02
PHTF1-201ENST00000357783 IQGAP1P46940 1657 aa21.4■■□□□ 1.02
PHTF1-201ENST00000357783 PANK3Q9H999 370 aa21.4■■□□□ 1.02
PHTF1-201ENST00000357783 NUDCQ9Y266 331 aa21.4■■□□□ 1.02
PHTF1-201ENST00000357783 NLRP13Q86W25 1043 aa21.39■■□□□ 1.02
PHTF1-201ENST00000357783 CC2D1BQ5T0F9 858 aaKnown RBP21.39■■□□□ 1.01
PHTF1-201ENST00000357783 PPP4R2Q9NY27 417 aa21.39■■□□□ 1.01
PHTF1-201ENST00000357783 UGGT1Q9NYU2 1555 aa21.37■■□□□ 1.01
PHTF1-201ENST00000357783 ZNF518AQ6AHZ1 1483 aa21.37■■□□□ 1.01
PHTF1-201ENST00000357783 EFCAB6Q5THR3 1501 aa21.34■■□□□ 1.01
PHTF1-201ENST00000357783 CD109Q6YHK3 1445 aa21.34■■□□□ 1.01
PHTF1-201ENST00000357783 STAC3Q96MF2 364 aa21.34■■□□□ 1.01
PHTF1-201ENST00000357783 SCAF11Q99590 1463 aaKnown RBP21.33■■□□□ 1.01
PHTF1-201ENST00000357783 WASHC2CQ9Y4E1 1318 aa21.33■■□□□ 1
PHTF1-201ENST00000357783 PPRC1Q5VV67 1664 aaKnown RBP21.33■■□□□ 1
PHTF1-201ENST00000357783 KIF1BO60333 1816 aa21.31■■□□□ 1
PHTF1-201ENST00000357783 RBM19Q9Y4C8 960 aaKnown RBP21.31■■□□□ 1
PHTF1-201ENST00000357783 CFAP74Q9C0B2 1584 aa21.3■■□□□ 1
PHTF1-201ENST00000357783 B4GALNT3Q6L9W6 998 aa21.3■■□□□ 1
PHTF1-201ENST00000357783 POGZQ7Z3K3 1410 aa21.3■■□□□ 1
PHTF1-201ENST00000357783 NEURL4Q96JN8 1562 aa21.28■■□□□ 1
PHTF1-201ENST00000357783 KIAA1210Q9ULL0 1709 aa21.28■■□□□ 1
PHTF1-201ENST00000357783 SALL2Q9Y467 1007 aaPredicted RBP21.28■■□□□ 1
PHTF1-201ENST00000357783 MAP3K4Q9Y6R4 1608 aa21.27■■□□□ 1
PHTF1-201ENST00000357783 MROH2AA6NES4 1674 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms