RNA–Protein interactions for RNA: ENST00000357641.10

BRPF3-202, Transcript of bromodomain and PHD finger containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRPF3, Length 6,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-202ENST00000357641 BCL11BQ9C0K0 894 aaPredicted RBP23.68■■□□□ 1.38
BRPF3-202ENST00000357641 PES1O00541 588 aaKnown RBP23.67■■□□□ 1.38
BRPF3-202ENST00000357641 GPATCH3Q96I76 525 aa23.67■■□□□ 1.38
BRPF3-202ENST00000357641 CHMP5Q9NZZ3 219 aa23.67■■□□□ 1.38
BRPF3-202ENST00000357641 RAB3GAP2Q9H2M9 1393 aa23.66■■□□□ 1.38
BRPF3-202ENST00000357641 ROCK2O75116 1388 aaKnown RBP23.66■■□□□ 1.38
BRPF3-202ENST00000357641 WRNQ14191 1432 aaPredicted RBP eCLIP23.66■■□□□ 1.38
BRPF3-202ENST00000357641 MAP7D2Q96T17 732 aa23.65■■□□□ 1.38
BRPF3-202ENST00000357641 H3BQV1 296 aa23.64■■□□□ 1.38
BRPF3-202ENST00000357641 IFFO2Q5TF58 517 aa23.64■■□□□ 1.38
BRPF3-202ENST00000357641 CCDC70Q6NSX1 233 aa23.64■■□□□ 1.38
BRPF3-202ENST00000357641 HOMER1Q86YM7 354 aa23.64■■□□□ 1.37
BRPF3-202ENST00000357641 TPM2P07951 284 aa23.63■■□□□ 1.37
BRPF3-202ENST00000357641 ATP6V1DQ9Y5K8 247 aa23.63■■□□□ 1.37
BRPF3-202ENST00000357641 RBM10P98175 930 aaKnown RBP23.63■■□□□ 1.37
BRPF3-202ENST00000357641 TPD52L1Q16890 204 aaPredicted RBP23.63■■□□□ 1.37
BRPF3-202ENST00000357641 MTERF4Q7Z6M4 381 aaKnown RBP23.63■■□□□ 1.37
BRPF3-202ENST00000357641 SLC4A10Q6U841 1118 aa23.62■■□□□ 1.37
BRPF3-202ENST00000357641 NLRP13Q86W25 1043 aa23.62■■□□□ 1.37
BRPF3-202ENST00000357641 TSR1Q2NL82 804 aaKnown RBP23.6■■□□□ 1.37
BRPF3-202ENST00000357641 ANKRD45Q5TZF3 282 aa23.6■■□□□ 1.37
BRPF3-202ENST00000357641 MRE11P49959 708 aa23.6■■□□□ 1.37
BRPF3-202ENST00000357641 PKD2Q13563 968 aa23.59■■□□□ 1.37
BRPF3-202ENST00000357641 IFT57Q9NWB7 429 aa23.59■■□□□ 1.37
BRPF3-202ENST00000357641 CHMP3Q9Y3E7 222 aa23.58■■□□□ 1.37
BRPF3-202ENST00000357641 CEP89Q96ST8 783 aa23.58■■□□□ 1.37
BRPF3-202ENST00000357641 ZBED9Q6R2W3 1325 aa23.58■■□□□ 1.37
BRPF3-202ENST00000357641 RILPL2Q969X0 211 aa23.57■■□□□ 1.36
BRPF3-202ENST00000357641 STK31Q9BXU1 1019 aa23.57■■□□□ 1.36
BRPF3-202ENST00000357641 KIF3AQ9Y496 699 aa23.57■■□□□ 1.36
BRPF3-202ENST00000357641 MCTP1Q6DN14 999 aa23.57■■□□□ 1.36
BRPF3-202ENST00000357641 ARGLU1Q9NWB6 273 aaPredicted RBP23.57■■□□□ 1.36
BRPF3-202ENST00000357641 KIF27Q86VH2 1401 aa23.57■■□□□ 1.36
BRPF3-202ENST00000357641 TPM1P09493 284 aa23.56■■□□□ 1.36
BRPF3-202ENST00000357641 NASPP49321 788 aaPredicted RBP23.56■■□□□ 1.36
BRPF3-202ENST00000357641 BCL2L13Q9BXK5 485 aa23.55■■□□□ 1.36
BRPF3-202ENST00000357641 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.55■■□□□ 1.36
BRPF3-202ENST00000357641 CCDC66A2RUB6 948 aa23.55■■□□□ 1.36
BRPF3-202ENST00000357641 FAM184AQ8NB25 1140 aa23.55■■□□□ 1.36
BRPF3-202ENST00000357641 CCDC39Q9UFE4 941 aa23.55■■□□□ 1.36
BRPF3-202ENST00000357641 GORABQ5T7V8 394 aa23.55■■□□□ 1.36
BRPF3-202ENST00000357641 KANK4Q5T7N3 995 aaPredicted RBP23.55■■□□□ 1.36
BRPF3-202ENST00000357641 PRM3Q9NNZ6 103 aa23.55■■□□□ 1.36
BRPF3-202ENST00000357641 TAF7LQ5H9L4 462 aa23.54■■□□□ 1.36
BRPF3-202ENST00000357641 HDGFL2Q7Z4V5 671 aaPredicted RBP23.54■■□□□ 1.36
BRPF3-202ENST00000357641 DIAPH3Q9NSV4 1193 aa23.54■■□□□ 1.36
BRPF3-202ENST00000357641 MNS1Q8NEH6 495 aa23.53■■□□□ 1.36
BRPF3-202ENST00000357641 COG6Q9Y2V7 657 aa23.53■■□□□ 1.36
BRPF3-202ENST00000357641 RRP7AQ9Y3A4 280 aaKnown RBP23.52■■□□□ 1.36
BRPF3-202ENST00000357641 MPHOSPH9Q99550 1183 aa23.52■■□□□ 1.36
BRPF3-202ENST00000357641 MYBBP1AQ9BQG0 1328 aaKnown RBP23.51■■□□□ 1.35
BRPF3-202ENST00000357641 ARHGAP35Q9NRY4 1499 aa23.5■■□□□ 1.35
BRPF3-202ENST00000357641 CWC15Q9P013 229 aaKnown RBP23.5■■□□□ 1.35
BRPF3-202ENST00000357641 PHLDB1Q86UU1 1377 aa23.5■■□□□ 1.35
BRPF3-202ENST00000357641 FHAD1B1AJZ9 1412 aa23.49■■□□□ 1.35
BRPF3-202ENST00000357641 STK26Q9P289 416 aa23.49■■□□□ 1.35
BRPF3-202ENST00000357641 KIF15Q9NS87 1388 aa23.48■■□□□ 1.35
BRPF3-202ENST00000357641 VPS8Q8N3P4 1428 aa23.47■■□□□ 1.35
BRPF3-202ENST00000357641 RRP12Q5JTH9 1297 aaKnown RBP23.47■■□□□ 1.35
BRPF3-202ENST00000357641 FBXW7Q969H0 707 aa23.47■■□□□ 1.35
BRPF3-202ENST00000357641 AK7Q96M32 723 aa23.46■■□□□ 1.35
BRPF3-202ENST00000357641 HSP90B2PQ58FF3 399 aa23.46■■□□□ 1.35
BRPF3-202ENST00000357641 BICD2Q8TD16 824 aa23.46■■□□□ 1.35
BRPF3-202ENST00000357641 RUFY1Q96T51 708 aa23.46■■□□□ 1.35
BRPF3-202ENST00000357641 L3MBTL2Q969R5 705 aa23.46■■□□□ 1.35
BRPF3-202ENST00000357641 ACBD3Q9H3P7 528 aa23.45■■□□□ 1.35
BRPF3-202ENST00000357641 TOMM22Q9NS69 142 aa23.45■■□□□ 1.35
BRPF3-202ENST00000357641 RNF214Q8ND24 703 aa23.45■■□□□ 1.34
BRPF3-202ENST00000357641 ZNF330Q9Y3S2 320 aaPredicted RBP23.45■■□□□ 1.34
BRPF3-202ENST00000357641 SPAG9O60271 1321 aaKnown RBP23.45■■□□□ 1.34
BRPF3-202ENST00000357641 TRAK2O60296 914 aa23.44■■□□□ 1.34
BRPF3-202ENST00000357641 CGNL1Q0VF96 1302 aa23.44■■□□□ 1.34
BRPF3-202ENST00000357641 H0YHG0 523 aa23.43■■□□□ 1.34
BRPF3-202ENST00000357641 ZKSCAN2Q63HK3 967 aa23.43■■□□□ 1.34
BRPF3-202ENST00000357641 PRKRIP1Q9H875 184 aaPredicted RBP23.43■■□□□ 1.34
BRPF3-202ENST00000357641 FRAT2O75474 233 aaPredicted RBP23.43■■□□□ 1.34
BRPF3-202ENST00000357641 NUCB2P80303 420 aa23.43■■□□□ 1.34
BRPF3-202ENST00000357641 KANK1Q14678 1352 aa23.43■■□□□ 1.34
BRPF3-202ENST00000357641 SASS6Q6UVJ0 657 aa23.42■■□□□ 1.34
BRPF3-202ENST00000357641 PCMTD1Q96MG8 357 aaPredicted RBP23.42■■□□□ 1.34
BRPF3-202ENST00000357641 RDXP35241 583 aaKnown RBP23.41■■□□□ 1.34
BRPF3-202ENST00000357641 IPO7O95373 1038 aaKnown RBP23.41■■□□□ 1.34
BRPF3-202ENST00000357641 PAK3O75914 559 aaPredicted RBP23.41■■□□□ 1.34
BRPF3-202ENST00000357641 C22orf23Q9BZE7 217 aa23.4■■□□□ 1.34
BRPF3-202ENST00000357641 SOGA1O94964 1423 aa23.4■■□□□ 1.34
BRPF3-202ENST00000357641 E9PSI1 815 aa23.39■■□□□ 1.34
BRPF3-202ENST00000357641 REC8O95072 547 aa23.39■■□□□ 1.34
BRPF3-202ENST00000357641 HDAC5Q9UQL6 1122 aa23.37■■□□□ 1.33
BRPF3-202ENST00000357641 VPS37CA5D8V6 355 aaPredicted RBP23.37■■□□□ 1.33
BRPF3-202ENST00000357641 RRP9O43818 475 aaKnown RBP23.37■■□□□ 1.33
BRPF3-202ENST00000357641 CCDC173Q0VFZ6 552 aa23.37■■□□□ 1.33
BRPF3-202ENST00000357641 ANO2Q9NQ90 1003 aa23.36■■□□□ 1.33
BRPF3-202ENST00000357641 MARCH6O60337 910 aa23.36■■□□□ 1.33
BRPF3-202ENST00000357641 ELL2O00472 640 aaPredicted RBP23.36■■□□□ 1.33
BRPF3-202ENST00000357641 MAPK8IP2Q13387 824 aaPredicted RBP23.36■■□□□ 1.33
BRPF3-202ENST00000357641 CAVIN1Q6NZI2 390 aaKnown RBP23.35■■□□□ 1.33
BRPF3-202ENST00000357641 CCDC9Q9Y3X0 531 aaKnown RBP23.35■■□□□ 1.33
BRPF3-202ENST00000357641 EIF3AQ14152 1382 aaKnown RBP23.33■■□□□ 1.33
BRPF3-202ENST00000357641 CDR1P51861 262 aa23.33■■□□□ 1.32
BRPF3-202ENST00000357641 LEKR1Q6ZMV7 388 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms