RNA–Protein interactions for RNA: ENST00000356175.7

NF1-201, Transcript of neurofibromin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NF1, Length 12,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-201ENST00000356175 SOX12O15370 315 aa8.46□□□□□ -1.06
NF1-201ENST00000356175 CREBRFQ8IUR6 639 aa8.46□□□□□ -1.06
NF1-201ENST00000356175 TRIM6-TRIM34B2RNG4 842 aa8.46□□□□□ -1.06
NF1-201ENST00000356175 TRIM34Q9BYJ4 488 aa8.46□□□□□ -1.06
NF1-201ENST00000356175 MTERF4Q7Z6M4 381 aaKnown RBP8.46□□□□□ -1.06
NF1-201ENST00000356175 SPC24Q8NBT2 197 aa8.45□□□□□ -1.06
NF1-201ENST00000356175 SYAP1Q96A49 352 aaPredicted RBP8.45□□□□□ -1.06
NF1-201ENST00000356175 PLPPR3Q6T4P5 718 aa8.45□□□□□ -1.06
NF1-201ENST00000356175 ESPNB1AK53 854 aa8.45□□□□□ -1.06
NF1-201ENST00000356175 TSPYL1Q9H0U9 437 aa8.45□□□□□ -1.06
NF1-201ENST00000356175 BRD2P25440 801 aaKnown RBP8.44□□□□□ -1.06
NF1-201ENST00000356175 CHIC2Q9UKJ5 165 aa8.44□□□□□ -1.06
NF1-201ENST00000356175 HTATSF1O43719 755 aaKnown RBP8.44□□□□□ -1.06
NF1-201ENST00000356175 PIK3R5Q8WYR1 880 aa8.44□□□□□ -1.06
NF1-201ENST00000356175 PDCL3Q9H2J4 239 aa8.44□□□□□ -1.06
NF1-201ENST00000356175 MCTP1Q6DN14 999 aa8.43□□□□□ -1.06
NF1-201ENST00000356175 CCDC9Q9Y3X0 531 aaKnown RBP8.43□□□□□ -1.06
NF1-201ENST00000356175 GOLGA4Q13439 2230 aaKnown RBP8.43□□□□□ -1.06
NF1-201ENST00000356175 CCDC39Q9UFE4 941 aa8.43□□□□□ -1.06
NF1-201ENST00000356175 POLR3GO15318 223 aaPredicted RBP8.43□□□□□ -1.06
NF1-201ENST00000356175 GIMAP7Q8NHV1 300 aa8.43□□□□□ -1.06
NF1-201ENST00000356175 GTF2F1P35269 517 aaKnown RBP eCLIP8.43□□□□□ -1.065e-6■■■■□ 24.4
NF1-201ENST00000356175 PHF14O94880 888 aa8.41□□□□□ -1.06
NF1-201ENST00000356175 CLGNO14967 610 aa8.41□□□□□ -1.06
NF1-201ENST00000356175 CAVIN1Q6NZI2 390 aaKnown RBP8.41□□□□□ -1.06
NF1-201ENST00000356175 PDCL2Q8N4E4 241 aa8.41□□□□□ -1.06
NF1-201ENST00000356175 HDAC5Q9UQL6 1122 aa8.41□□□□□ -1.06
NF1-201ENST00000356175 FAM193AP78312 1265 aa8.4□□□□□ -1.06
NF1-201ENST00000356175 TPD52L1Q16890 204 aaPredicted RBP8.4□□□□□ -1.06
NF1-201ENST00000356175 HOMER1Q86YM7 354 aa8.4□□□□□ -1.06
NF1-201ENST00000356175 RB1CC1Q8TDY2 1594 aa8.4□□□□□ -1.06
NF1-201ENST00000356175 HMMRO75330 724 aa8.4□□□□□ -1.06
NF1-201ENST00000356175 EIF4G2P78344 907 aaKnown RBP eCLIP8.4□□□□□ -1.06
NF1-201ENST00000356175 HOMEZQ8IX15 550 aa8.4□□□□□ -1.06
NF1-201ENST00000356175 KAT6AQ92794 2004 aa8.4□□□□□ -1.06
NF1-201ENST00000356175 LEKR1Q6ZMV7 388 aa8.4□□□□□ -1.07
NF1-201ENST00000356175 MRE11P49959 708 aa8.4□□□□□ -1.07
NF1-201ENST00000356175 CRBNQ96SW2 442 aa8.4□□□□□ -1.07
NF1-201ENST00000356175 CLSTN1O94985 981 aa8.39□□□□□ -1.07
NF1-201ENST00000356175 TIGD1Q96MW7 591 aa8.39□□□□□ -1.07
NF1-201ENST00000356175 GRPEL1Q9HAV7 217 aa8.39□□□□□ -1.07
NF1-201ENST00000356175 HSP90B1P14625 803 aaKnown RBP8.39□□□□□ -1.07
NF1-201ENST00000356175 TRAK2O60296 914 aa8.39□□□□□ -1.07
NF1-201ENST00000356175 LMOD3Q0VAK6 560 aa8.39□□□□□ -1.07
NF1-201ENST00000356175 FAM161AQ3B820 660 aa8.39□□□□□ -1.07
NF1-201ENST00000356175 ZBTB12Q9Y330 459 aaPredicted RBP8.39□□□□□ -1.07
NF1-201ENST00000356175 CLIP1P30622 1438 aa8.39□□□□□ -1.07
NF1-201ENST00000356175 SKAP1Q86WV1 359 aa8.38□□□□□ -1.07
NF1-201ENST00000356175 EEA1Q15075 1411 aa8.38□□□□□ -1.07
NF1-201ENST00000356175 KIF16BQ96L93 1317 aa8.38□□□□□ -1.07
NF1-201ENST00000356175 FOSBP53539 338 aa8.38□□□□□ -1.07
NF1-201ENST00000356175 CROCCQ5TZA2 2017 aa8.38□□□□□ -1.07
NF1-201ENST00000356175 TDO2P48775 406 aa8.38□□□□□ -1.07
NF1-201ENST00000356175 DNAJC2Q99543 621 aaKnown RBP8.37□□□□□ -1.07
NF1-201ENST00000356175 DYDC1Q8WWB3 177 aa8.37□□□□□ -1.07
NF1-201ENST00000356175 RRP12Q5JTH9 1297 aaKnown RBP8.37□□□□□ -1.07
NF1-201ENST00000356175 NEFHP12036 1026 aa8.37□□□□□ -1.07
NF1-201ENST00000356175 CCER2I3L3R5 266 aa8.37□□□□□ -1.07
NF1-201ENST00000356175 CCDC173Q0VFZ6 552 aa8.36□□□□□ -1.07
NF1-201ENST00000356175 CT47A1Q5JQC4 288 aaPredicted RBP8.36□□□□□ -1.07
NF1-201ENST00000356175 BANK1Q8NDB2 785 aa8.36□□□□□ -1.07
NF1-201ENST00000356175 AK7Q96M32 723 aa8.36□□□□□ -1.07
NF1-201ENST00000356175 AKNAQ7Z591 1439 aa8.36□□□□□ -1.07
NF1-201ENST00000356175 MPHOSPH10O00566 681 aaKnown RBP8.36□□□□□ -1.07
NF1-201ENST00000356175 MNS1Q8NEH6 495 aa8.36□□□□□ -1.07
NF1-201ENST00000356175 CHMP4CQ96CF2 233 aa8.36□□□□□ -1.07
NF1-201ENST00000356175 AXDND1Q5T1B0 1012 aaPredicted RBP8.35□□□□□ -1.07
NF1-201ENST00000356175 NUDCQ9Y266 331 aa8.35□□□□□ -1.07
NF1-201ENST00000356175 ITPRIPQ8IWB1 547 aa8.35□□□□□ -1.07
NF1-201ENST00000356175 ARID4AP29374 1257 aaPredicted RBP8.35□□□□□ -1.07
NF1-201ENST00000356175 PANK2Q9BZ23 570 aa8.35□□□□□ -1.07
NF1-201ENST00000356175 DRC1Q96MC2 740 aa8.35□□□□□ -1.07
NF1-201ENST00000356175 GOLIM4O00461 696 aa8.35□□□□□ -1.07
NF1-201ENST00000356175 KIF3AQ9Y496 699 aa8.35□□□□□ -1.07
NF1-201ENST00000356175 RRAGDQ9NQL2 400 aaPredicted RBP8.34□□□□□ -1.07
NF1-201ENST00000356175 RRP7BPQ9NSQ0 103 aa8.34□□□□□ -1.07
NF1-201ENST00000356175 SCRIBQ14160 1630 aa8.34□□□□□ -1.07
NF1-201ENST00000356175 CALCOCO1Q9P1Z2 691 aa8.34□□□□□ -1.07
NF1-201ENST00000356175 ANKRD12Q6UB98 2062 aa8.34□□□□□ -1.07
NF1-201ENST00000356175 ZNF777Q9ULD5 760 aaPredicted RBP8.34□□□□□ -1.07
NF1-201ENST00000356175 TCHHQ07283 1943 aa8.33□□□□□ -1.08
NF1-201ENST00000356175 CCDC191Q8NCU4 936 aa8.33□□□□□ -1.08
NF1-201ENST00000356175 SKOR2Q2VWA4 1001 aaPredicted RBP8.33□□□□□ -1.08
NF1-201ENST00000356175 KIAA0754O94854 1291 aa8.33□□□□□ -1.08
NF1-201ENST00000356175 RTF1Q92541 710 aaKnown RBP8.33□□□□□ -1.08
NF1-201ENST00000356175 DIAPH3Q9NSV4 1193 aa8.33□□□□□ -1.08
NF1-201ENST00000356175 ARGLU1Q9NWB6 273 aaPredicted RBP8.32□□□□□ -1.08
NF1-201ENST00000356175 PES1O00541 588 aaKnown RBP8.32□□□□□ -1.08
NF1-201ENST00000356175 MNAT1P51948 309 aa8.32□□□□□ -1.08
NF1-201ENST00000356175 HSP90B2PQ58FF3 399 aa8.32□□□□□ -1.08
NF1-201ENST00000356175 CLUAP1Q96AJ1 413 aa8.32□□□□□ -1.08
NF1-201ENST00000356175 SASS6Q6UVJ0 657 aa8.32□□□□□ -1.08
NF1-201ENST00000356175 MYH9P35579 1960 aaKnown RBP8.32□□□□□ -1.08
NF1-201ENST00000356175 KTN1Q86UP2 1357 aaKnown RBP8.31□□□□□ -1.08
NF1-201ENST00000356175 RRP1P56182 461 aaKnown RBP8.31□□□□□ -1.08
NF1-201ENST00000356175 CCDC146Q8IYE0 955 aa8.31□□□□□ -1.08
NF1-201ENST00000356175 ZCCHC6Q5VYS8 1495 aaKnown RBP8.31□□□□□ -1.08
NF1-201ENST00000356175 BAZ2BQ9UIF8 2168 aaKnown RBP8.31□□□□□ -1.08
NF1-201ENST00000356175 TPM3P06753 285 aa8.31□□□□□ -1.08
NF1-201ENST00000356175 C10orf67Q8IYJ2 551 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms