RNA–Protein interactions for RNA: ENST00000355612.6

KRT39-201, Transcript of keratin 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT39, Length 1,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-201ENST00000355612 NUP155O75694 1391 aa9.25□□□□□ -0.93
KRT39-201ENST00000355612 DUOX2Q9NRD8 1548 aa9.25□□□□□ -0.93
KRT39-201ENST00000355612 PKD2Q13563 968 aa9.24□□□□□ -0.93
KRT39-201ENST00000355612 TPRNQ4KMQ1 711 aa9.24□□□□□ -0.93
KRT39-201ENST00000355612 POTEDQ86YR6 584 aa9.24□□□□□ -0.93
KRT39-201ENST00000355612 L3MBTL2Q969R5 705 aa9.24□□□□□ -0.93
KRT39-201ENST00000355612 FAM135AQ9P2D6 1515 aa9.23□□□□□ -0.93
KRT39-201ENST00000355612 IQGAP3Q86VI3 1631 aa9.23□□□□□ -0.93
KRT39-201ENST00000355612 TRHP20396 242 aaPredicted RBP9.23□□□□□ -0.93
KRT39-201ENST00000355612 YTHDC1Q96MU7 727 aaKnown RBP9.23□□□□□ -0.93
KRT39-201ENST00000355612 POLR1AO95602 1720 aaPredicted RBP9.23□□□□□ -0.93
KRT39-201ENST00000355612 ARHGEF12Q9NZN5 1544 aa9.23□□□□□ -0.93
KRT39-201ENST00000355612 ERBINQ96RT1 1412 aa9.22□□□□□ -0.93
KRT39-201ENST00000355612 CFAP74Q9C0B2 1584 aa9.22□□□□□ -0.93
KRT39-201ENST00000355612 DDX10Q13206 875 aaKnown RBP9.21□□□□□ -0.93
KRT39-201ENST00000355612 FANCAO15360 1455 aa9.21□□□□□ -0.94
KRT39-201ENST00000355612 VASPP50552 380 aaPredicted RBP9.2□□□□□ -0.94
KRT39-201ENST00000355612 EIF4G2P78344 907 aaKnown RBP eCLIP9.2□□□□□ -0.94
KRT39-201ENST00000355612 HIRIP3Q9BW71 556 aaPredicted RBP9.2□□□□□ -0.94
KRT39-201ENST00000355612 ZFYVE16Q7Z3T8 1539 aa9.2□□□□□ -0.94
KRT39-201ENST00000355612 RTEL1-TNFRSF6BF6WH68 1400 aa9.2□□□□□ -0.94
KRT39-201ENST00000355612 ASXL2Q76L83 1435 aa9.2□□□□□ -0.94
KRT39-201ENST00000355612 MAGI2Q86UL8 1455 aa9.2□□□□□ -0.94
KRT39-201ENST00000355612 NPM1P06748 294 aaKnown RBP eCLIP9.2□□□□□ -0.94
KRT39-201ENST00000355612 KDM2AQ9Y2K7 1162 aa9.2□□□□□ -0.94
KRT39-201ENST00000355612 INO80Q9ULG1 1556 aaPredicted RBP9.19□□□□□ -0.94
KRT39-201ENST00000355612 TRAPPC8Q9Y2L5 1435 aa9.19□□□□□ -0.94
KRT39-201ENST00000355612 HSPA5P11021 654 aaKnown RBP9.18□□□□□ -0.94
KRT39-201ENST00000355612 IFNLR1Q8IU57 520 aaPredicted RBP9.18□□□□□ -0.94
KRT39-201ENST00000355612 SPAG9O60271 1321 aaKnown RBP9.18□□□□□ -0.94
KRT39-201ENST00000355612 ATP7AQ04656 1500 aa9.18□□□□□ -0.94
KRT39-201ENST00000355612 ADGRL1O94910 1474 aa9.17□□□□□ -0.94
KRT39-201ENST00000355612 DEPDC5O75140 1603 aa9.17□□□□□ -0.94
KRT39-201ENST00000355612 EIF2AK4Q9P2K8 1649 aaKnown RBP9.17□□□□□ -0.94
KRT39-201ENST00000355612 CCDC144AA2RUR9 1427 aa9.16□□□□□ -0.94
KRT39-201ENST00000355612 SPDYE4A6NLX3 237 aa9.16□□□□□ -0.94
KRT39-201ENST00000355612 ANP32CO43423 234 aa9.16□□□□□ -0.94
KRT39-201ENST00000355612 NBPF8Q3BBV2 869 aa9.16□□□□□ -0.94
KRT39-201ENST00000355612 SAMD1Q6SPF0 538 aaPredicted RBP9.16□□□□□ -0.94
KRT39-201ENST00000355612 RIMBP3CA6NJZ7 1639 aa9.16□□□□□ -0.94
KRT39-201ENST00000355612 RIMBP3BA6NNM3 1639 aa9.16□□□□□ -0.94
KRT39-201ENST00000355612 RIMBP3Q9UFD9 1639 aa9.16□□□□□ -0.94
KRT39-201ENST00000355612 UHRF1BP1Q6BDS2 1440 aa9.15□□□□□ -0.94
KRT39-201ENST00000355612 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.15□□□□□ -0.94
KRT39-201ENST00000355612 RALGAPBQ86X10 1494 aa9.15□□□□□ -0.95
KRT39-201ENST00000355612 PROM2Q8N271 834 aa9.14□□□□□ -0.95
KRT39-201ENST00000355612 KDM5CP41229 1560 aa9.14□□□□□ -0.95
KRT39-201ENST00000355612 TET3O43151 1660 aa9.14□□□□□ -0.95
KRT39-201ENST00000355612 SCAPERQ9BY12 1400 aa9.13□□□□□ -0.95
KRT39-201ENST00000355612 E9PCH4 1651 aa9.13□□□□□ -0.95
KRT39-201ENST00000355612 SPHKAPQ2M3C7 1700 aa9.13□□□□□ -0.95
KRT39-201ENST00000355612 CCER2I3L3R5 266 aa9.13□□□□□ -0.95
KRT39-201ENST00000355612 CYB5RLQ6IPT4 315 aa9.13□□□□□ -0.95
KRT39-201ENST00000355612 WASHC2AQ641Q2 1341 aa9.13□□□□□ -0.95
KRT39-201ENST00000355612 SPATA31E1Q6ZUB1 1445 aa9.13□□□□□ -0.95
KRT39-201ENST00000355612 ATP10AO60312 1499 aa9.13□□□□□ -0.95
KRT39-201ENST00000355612 ZNF518AQ6AHZ1 1483 aa9.13□□□□□ -0.95
KRT39-201ENST00000355612 KIDINS220Q9ULH0 1771 aa9.13□□□□□ -0.95
KRT39-201ENST00000355612 CEP152O94986 1710 aa9.12□□□□□ -0.95
KRT39-201ENST00000355612 CNTLNQ9NXG0 1405 aa9.12□□□□□ -0.95
KRT39-201ENST00000355612 ZNF326Q5BKZ1 582 aaKnown RBP9.12□□□□□ -0.95
KRT39-201ENST00000355612 AFAP1Q8N556 730 aa9.12□□□□□ -0.95
KRT39-201ENST00000355612 TRPM1Q7Z4N2 1603 aa9.11□□□□□ -0.95
KRT39-201ENST00000355612 CD109Q6YHK3 1445 aa9.11□□□□□ -0.95
KRT39-201ENST00000355612 KANK1Q14678 1352 aa9.11□□□□□ -0.95
KRT39-201ENST00000355612 CCDC7Q96M83 1385 aa9.11□□□□□ -0.95
KRT39-201ENST00000355612 ZNF219Q9P2Y4 722 aaPredicted RBP9.11□□□□□ -0.95
KRT39-201ENST00000355612 PRDM15P57071 1507 aaPredicted RBP9.11□□□□□ -0.95
KRT39-201ENST00000355612 USP47Q96K76 1375 aa9.11□□□□□ -0.95
KRT39-201ENST00000355612 MYT1LQ9UL68 1186 aa9.1□□□□□ -0.95
KRT39-201ENST00000355612 GTF3C3Q9Y5Q9 886 aa9.1□□□□□ -0.95
KRT39-201ENST00000355612 U3KPZ7 1027 aaPredicted RBP9.1□□□□□ -0.95
KRT39-201ENST00000355612 HECW2Q9P2P5 1572 aa9.1□□□□□ -0.95
KRT39-201ENST00000355612 TRPM2O94759 1503 aa9.1□□□□□ -0.95
KRT39-201ENST00000355612 PLA2R1Q13018 1463 aa9.1□□□□□ -0.95
KRT39-201ENST00000355612 LAMC1P11047 1609 aa9.1□□□□□ -0.95
KRT39-201ENST00000355612 VWDEQ8N2E2 1590 aa9.1□□□□□ -0.95
KRT39-201ENST00000355612 DCAF11Q8TEB1 546 aa9.09□□□□□ -0.95
KRT39-201ENST00000355612 BCORL1Q5H9F3 1711 aa9.09□□□□□ -0.95
KRT39-201ENST00000355612 POGZQ7Z3K3 1410 aa9.09□□□□□ -0.96
KRT39-201ENST00000355612 RNF17Q9BXT8 1623 aaKnown RBP9.08□□□□□ -0.96
KRT39-201ENST00000355612 PELP1Q8IZL8 1130 aaKnown RBP9.08□□□□□ -0.96
KRT39-201ENST00000355612 NEO1Q92859 1461 aa9.08□□□□□ -0.96
KRT39-201ENST00000355612 PRAG1Q86YV5 1406 aa9.08□□□□□ -0.96
KRT39-201ENST00000355612 MROH1Q8NDA8 1641 aa9.08□□□□□ -0.96
KRT39-201ENST00000355612 MAP3K4Q9Y6R4 1608 aa9.08□□□□□ -0.96
KRT39-201ENST00000355612 DHX29Q7Z478 1369 aaKnown RBP9.08□□□□□ -0.96
KRT39-201ENST00000355612 ARID4BQ4LE39 1312 aaPredicted RBP9.08□□□□□ -0.96
KRT39-201ENST00000355612 A2MP01023 1474 aa9.07□□□□□ -0.96
KRT39-201ENST00000355612 KIF7Q2M1P5 1343 aa9.07□□□□□ -0.96
KRT39-201ENST00000355612 CARD11Q9BXL7 1154 aa9.07□□□□□ -0.96
KRT39-201ENST00000355612 ROCK2O75116 1388 aaKnown RBP9.06□□□□□ -0.96
KRT39-201ENST00000355612 KIF1BO60333 1816 aa9.06□□□□□ -0.96
KRT39-201ENST00000355612 MLH3Q9UHC1 1453 aa9.06□□□□□ -0.96
KRT39-201ENST00000355612 CLTCL1P53675 1640 aa9.06□□□□□ -0.96
KRT39-201ENST00000355612 GLI2P10070 1586 aa9.06□□□□□ -0.96
KRT39-201ENST00000355612 MKRN4PQ13434 485 aaPredicted RBP9.06□□□□□ -0.96
KRT39-201ENST00000355612 EFCAB6Q5THR3 1501 aa9.06□□□□□ -0.96
KRT39-201ENST00000355612 KIF3BO15066 747 aa9.05□□□□□ -0.96
KRT39-201ENST00000355612 BBXQ8WY36 941 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms