RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 NBPF8Q3BBV2 869 aa36.44■■■■□ 3.42
CLK2-201ENST00000355560 EIF2AK4Q9P2K8 1649 aaKnown RBP36.4■■■■□ 3.42
CLK2-201ENST00000355560 GLI2P10070 1586 aa36.39■■■■□ 3.42
CLK2-201ENST00000355560 DHX29Q7Z478 1369 aaKnown RBP36.39■■■■□ 3.42
CLK2-201ENST00000355560 CCDC144AA2RUR9 1427 aa36.38■■■■□ 3.41
CLK2-201ENST00000355560 PLA2R1Q13018 1463 aa36.37■■■■□ 3.41
CLK2-201ENST00000355560 HECW2Q9P2P5 1572 aa36.35■■■■□ 3.41
CLK2-201ENST00000355560 MLH3Q9UHC1 1453 aa36.33■■■■□ 3.41
CLK2-201ENST00000355560 EIF4G2P78344 907 aaKnown RBP eCLIP36.32■■■■□ 3.4
CLK2-201ENST00000355560 HSPA5P11021 654 aaKnown RBP36.31■■■■□ 3.4
CLK2-201ENST00000355560 DIP2BQ9P265 1576 aa36.31■■■■□ 3.4
CLK2-201ENST00000355560 KIF3BO15066 747 aa36.31■■■■□ 3.4
CLK2-201ENST00000355560 ATP10AO60312 1499 aa36.31■■■■□ 3.4
CLK2-201ENST00000355560 DDX10Q13206 875 aaKnown RBP36.3■■■■□ 3.4
CLK2-201ENST00000355560 E9PCH4 1651 aa36.29■■■■□ 3.4
CLK2-201ENST00000355560 PRDM15P57071 1507 aaPredicted RBP36.29■■■■□ 3.4
CLK2-201ENST00000355560 VWDEQ8N2E2 1590 aa36.28■■■■□ 3.4
CLK2-201ENST00000355560 A2MP01023 1474 aa36.27■■■■□ 3.4
CLK2-201ENST00000355560 KANK1Q14678 1352 aa36.27■■■■□ 3.4
CLK2-201ENST00000355560 MROH1Q8NDA8 1641 aa36.27■■■■□ 3.4
CLK2-201ENST00000355560 TET3O43151 1660 aa36.26■■■■□ 3.39
CLK2-201ENST00000355560 ZNF326Q5BKZ1 582 aaKnown RBP36.26■■■■□ 3.39
CLK2-201ENST00000355560 UHRF1BP1Q6BDS2 1440 aa36.25■■■■□ 3.39
CLK2-201ENST00000355560 FAM69CQ0P6D2 419 aa36.23■■■■□ 3.39
CLK2-201ENST00000355560 ABCA6Q8N139 1617 aa36.22■■■■□ 3.39
CLK2-201ENST00000355560 RAPGEF3O95398 923 aa36.22■■■■□ 3.39
CLK2-201ENST00000355560 RICTORQ6R327 1708 aa36.21■■■■□ 3.39
CLK2-201ENST00000355560 FRMPD1Q5SYB0 1578 aa36.2■■■■□ 3.39
CLK2-201ENST00000355560 DCAF11Q8TEB1 546 aa36.19■■■■□ 3.38
CLK2-201ENST00000355560 RNF17Q9BXT8 1623 aaKnown RBP36.17■■■■□ 3.38
CLK2-201ENST00000355560 SPHKAPQ2M3C7 1700 aa36.16■■■■□ 3.38
CLK2-201ENST00000355560 RALGAPBQ86X10 1494 aa36.15■■■■□ 3.38
CLK2-201ENST00000355560 KDM2AQ9Y2K7 1162 aa36.15■■■■□ 3.38
CLK2-201ENST00000355560 SPATA31E1Q6ZUB1 1445 aa36.15■■■■□ 3.38
CLK2-201ENST00000355560 TRPM2O94759 1503 aa36.14■■■■□ 3.38
CLK2-201ENST00000355560 TSPOAP1O95153 1857 aa36.11■■■■□ 3.37
CLK2-201ENST00000355560 RGL3Q3MIN7 710 aa36.11■■■■□ 3.37
CLK2-201ENST00000355560 PTPRTO14522 1441 aa36.1■■■■□ 3.37
CLK2-201ENST00000355560 DIP2CQ9Y2E4 1556 aa36.09■■■■□ 3.37
CLK2-201ENST00000355560 BCORL1Q5H9F3 1711 aa36.09■■■■□ 3.37
CLK2-201ENST00000355560 WASHC2AQ641Q2 1341 aa36.08■■■■□ 3.37
CLK2-201ENST00000355560 PPRC1Q5VV67 1664 aaKnown RBP36.08■■■■□ 3.37
CLK2-201ENST00000355560 EFCAB6Q5THR3 1501 aa36.07■■■■□ 3.37
CLK2-201ENST00000355560 CEP152O94986 1710 aa36.05■■■■□ 3.36
CLK2-201ENST00000355560 LMTK2Q8IWU2 1503 aa36.05■■■■□ 3.36
CLK2-201ENST00000355560 USP47Q96K76 1375 aa36.05■■■■□ 3.36
CLK2-201ENST00000355560 PRAG1Q86YV5 1406 aa36.04■■■■□ 3.36
CLK2-201ENST00000355560 YTHDC1Q96MU7 727 aaKnown RBP36.04■■■■□ 3.36
CLK2-201ENST00000355560 CLTCL1P53675 1640 aa36.03■■■■□ 3.36
CLK2-201ENST00000355560 TRPM1Q7Z4N2 1603 aa35.99■■■■□ 3.35
CLK2-201ENST00000355560 YEATS2Q9ULM3 1422 aa35.98■■■■□ 3.35
CLK2-201ENST00000355560 POLR1AO95602 1720 aaPredicted RBP35.98■■■■□ 3.35
CLK2-201ENST00000355560 CARD11Q9BXL7 1154 aa35.98■■■■□ 3.35
CLK2-201ENST00000355560 ZMYM4Q5VZL5 1548 aa35.97■■■■□ 3.35
CLK2-201ENST00000355560 GGT6Q6P531 493 aa35.97■■■■□ 3.35
CLK2-201ENST00000355560 KIF13AQ9H1H9 1805 aa35.97■■■■□ 3.35
CLK2-201ENST00000355560 C11orf95C9JLR9 678 aaPredicted RBP35.96■■■■□ 3.35
CLK2-201ENST00000355560 CENPBP07199 599 aaPredicted RBP35.96■■■■□ 3.35
CLK2-201ENST00000355560 CCDC7Q96M83 1385 aa35.96■■■■□ 3.35
CLK2-201ENST00000355560 ROCK2O75116 1388 aaKnown RBP35.94■■■■□ 3.34
CLK2-201ENST00000355560 ABCC3O15438 1527 aa35.89■■■■□ 3.34
CLK2-201ENST00000355560 ANP32CO43423 234 aa35.89■■■■□ 3.34
CLK2-201ENST00000355560 UGGT1Q9NYU2 1555 aa35.87■■■■□ 3.33
CLK2-201ENST00000355560 KIF7Q2M1P5 1343 aa35.87■■■■□ 3.33
CLK2-201ENST00000355560 NPATQ14207 1427 aa35.86■■■■□ 3.33
CLK2-201ENST00000355560 WASHC2CQ9Y4E1 1318 aa35.85■■■■□ 3.33
CLK2-201ENST00000355560 CNTLNQ9NXG0 1405 aa35.84■■■■□ 3.33
CLK2-201ENST00000355560 NEURL4Q96JN8 1562 aa35.84■■■■□ 3.33
CLK2-201ENST00000355560 CAMSAP1Q5T5Y3 1602 aa35.83■■■■□ 3.33
CLK2-201ENST00000355560 GPRASP1Q5JY77 1395 aa35.81■■■■□ 3.32
CLK2-201ENST00000355560 KIF1BO60333 1816 aa35.81■■■■□ 3.32
CLK2-201ENST00000355560 LAMC1P11047 1609 aa35.8■■■■□ 3.32
CLK2-201ENST00000355560 MADDQ8WXG6 1647 aa35.8■■■■□ 3.32
CLK2-201ENST00000355560 NBPF1Q3BBV0 1214 aa35.79■■■■□ 3.32
CLK2-201ENST00000355560 ZC3H13Q5T200 1668 aaKnown RBP35.78■■■■□ 3.32
CLK2-201ENST00000355560 CFAP65Q6ZU64 1925 aaKnown RBP35.77■■■■□ 3.32
CLK2-201ENST00000355560 ST20-MTHFSA0A0A6YYL1 179 aa35.75■■■■□ 3.31
CLK2-201ENST00000355560 STAC3Q96MF2 364 aa35.74■■■■□ 3.31
CLK2-201ENST00000355560 MROH2AA6NES4 1674 aa35.72■■■■□ 3.31
CLK2-201ENST00000355560 ARID4BQ4LE39 1312 aaPredicted RBP35.7■■■■□ 3.31
CLK2-201ENST00000355560 REREQ9P2R6 1566 aa35.7■■■■□ 3.31
CLK2-201ENST00000355560 CCER2I3L3R5 266 aa35.69■■■■□ 3.3
CLK2-201ENST00000355560 SIGLEC1Q9BZZ2 1709 aa35.69■■■■□ 3.3
CLK2-201ENST00000355560 COL17A1Q9UMD9 1497 aaPredicted RBP35.68■■■■□ 3.3
CLK2-201ENST00000355560 ADGRB3O60242 1522 aa35.67■■■■□ 3.3
CLK2-201ENST00000355560 ARHGAP31Q2M1Z3 1444 aa35.65■■■■□ 3.3
CLK2-201ENST00000355560 IFT172Q9UG01 1749 aa35.65■■■■□ 3.3
CLK2-201ENST00000355560 NOS1P29475 1434 aa35.65■■■■□ 3.3
CLK2-201ENST00000355560 MYOM2P54296 1465 aa35.64■■■■□ 3.3
CLK2-201ENST00000355560 POLR3GLQ9BT43 218 aa35.63■■■■□ 3.29
CLK2-201ENST00000355560 AGLP35573 1532 aa35.61■■■■□ 3.29
CLK2-201ENST00000355560 ARHGEF40Q8TER5 1519 aa35.6■■■■□ 3.29
CLK2-201ENST00000355560 SYNMO15061 1565 aa35.59■■■■□ 3.29
CLK2-201ENST00000355560 PIK3C2BO00750 1634 aa35.58■■■■□ 3.29
CLK2-201ENST00000355560 CHGAP10645 457 aaKnown RBP35.57■■■■□ 3.28
CLK2-201ENST00000355560 KIAA1210Q9ULL0 1709 aa35.57■■■■□ 3.28
CLK2-201ENST00000355560 IQGAP1P46940 1657 aa35.55■■■■□ 3.28
CLK2-201ENST00000355560 ADGRF5Q8IZF2 1346 aa35.51■■■■□ 3.28
CLK2-201ENST00000355560 PREX1Q8TCU6 1659 aa35.51■■■■□ 3.27
CLK2-201ENST00000355560 PPLO60437 1756 aa35.5■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms