RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 RICTORQ6R327 1708 aa32.75■■■□□ 2.83
SCAMP3-202ENST00000355379 FAM69CQ0P6D2 419 aa32.73■■■□□ 2.83
SCAMP3-202ENST00000355379 DIEXFQ68CQ4 756 aaKnown RBP32.73■■■□□ 2.83
SCAMP3-202ENST00000355379 MYT1LQ9UL68 1186 aa32.72■■■□□ 2.83
SCAMP3-202ENST00000355379 PPRC1Q5VV67 1664 aaKnown RBP32.71■■■□□ 2.83
SCAMP3-202ENST00000355379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.71■■■□□ 2.83
SCAMP3-202ENST00000355379 L3MBTL2Q969R5 705 aa32.7■■■□□ 2.83
SCAMP3-202ENST00000355379 VWDEQ8N2E2 1590 aa32.68■■■□□ 2.82
SCAMP3-202ENST00000355379 A2MP01023 1474 aa32.68■■■□□ 2.82
SCAMP3-202ENST00000355379 KIF13AQ9H1H9 1805 aa32.67■■■□□ 2.82
SCAMP3-202ENST00000355379 BCORL1Q5H9F3 1711 aa32.67■■■□□ 2.82
SCAMP3-202ENST00000355379 PRDM15P57071 1507 aaPredicted RBP32.66■■■□□ 2.82
SCAMP3-202ENST00000355379 ABCA6Q8N139 1617 aa32.65■■■□□ 2.82
SCAMP3-202ENST00000355379 ATP10AO60312 1499 aa32.64■■■□□ 2.82
SCAMP3-202ENST00000355379 MROH1Q8NDA8 1641 aa32.64■■■□□ 2.81
SCAMP3-202ENST00000355379 TET3O43151 1660 aa32.64■■■□□ 2.81
SCAMP3-202ENST00000355379 TSPOAP1O95153 1857 aa32.63■■■□□ 2.81
SCAMP3-202ENST00000355379 RNF17Q9BXT8 1623 aaKnown RBP32.63■■■□□ 2.81
SCAMP3-202ENST00000355379 KANK1Q14678 1352 aa32.62■■■□□ 2.81
SCAMP3-202ENST00000355379 FRMPD1Q5SYB0 1578 aa32.6■■■□□ 2.81
SCAMP3-202ENST00000355379 E9PCH4 1651 aa32.59■■■□□ 2.81
SCAMP3-202ENST00000355379 KIF3BO15066 747 aa32.58■■■□□ 2.81
SCAMP3-202ENST00000355379 ZMYM4Q5VZL5 1548 aa32.58■■■□□ 2.81
SCAMP3-202ENST00000355379 PLA2R1Q13018 1463 aa32.58■■■□□ 2.81
SCAMP3-202ENST00000355379 DIP2CQ9Y2E4 1556 aa32.57■■■□□ 2.8
SCAMP3-202ENST00000355379 RAPGEF3O95398 923 aa32.56■■■□□ 2.8
SCAMP3-202ENST00000355379 CCDC144AA2RUR9 1427 aa32.54■■■□□ 2.8
SCAMP3-202ENST00000355379 LMTK2Q8IWU2 1503 aa32.52■■■□□ 2.8
SCAMP3-202ENST00000355379 SPHKAPQ2M3C7 1700 aa32.5■■■□□ 2.79
SCAMP3-202ENST00000355379 UHRF1BP1Q6BDS2 1440 aa32.47■■■□□ 2.79
SCAMP3-202ENST00000355379 PTPRTO14522 1441 aa32.46■■■□□ 2.79
SCAMP3-202ENST00000355379 TRPM2O94759 1503 aa32.45■■■□□ 2.79
SCAMP3-202ENST00000355379 NBPF8Q3BBV2 869 aa32.45■■■□□ 2.78
SCAMP3-202ENST00000355379 CEP152O94986 1710 aa32.44■■■□□ 2.78
SCAMP3-202ENST00000355379 EFCAB6Q5THR3 1501 aa32.43■■■□□ 2.78
SCAMP3-202ENST00000355379 YEATS2Q9ULM3 1422 aa32.4■■■□□ 2.78
SCAMP3-202ENST00000355379 REREQ9P2R6 1566 aa32.38■■■□□ 2.77
SCAMP3-202ENST00000355379 EIF4G2P78344 907 aaKnown RBP eCLIP32.33■■■□□ 2.772e-10■■■■□ 24.2
SCAMP3-202ENST00000355379 ZC3H13Q5T200 1668 aaKnown RBP32.33■■■□□ 2.77
SCAMP3-202ENST00000355379 CLTCL1P53675 1640 aa32.33■■■□□ 2.77
SCAMP3-202ENST00000355379 NEURL4Q96JN8 1562 aa32.32■■■□□ 2.77
SCAMP3-202ENST00000355379 ABCC3O15438 1527 aa32.32■■■□□ 2.76
SCAMP3-202ENST00000355379 RALGAPBQ86X10 1494 aa32.31■■■□□ 2.76
SCAMP3-202ENST00000355379 SPATA31E1Q6ZUB1 1445 aa32.29■■■□□ 2.76
SCAMP3-202ENST00000355379 HSPA5P11021 654 aaKnown RBP32.28■■■□□ 2.76
SCAMP3-202ENST00000355379 CAMSAP1Q5T5Y3 1602 aa32.27■■■□□ 2.76
SCAMP3-202ENST00000355379 GGT6Q6P531 493 aa32.27■■■□□ 2.76
SCAMP3-202ENST00000355379 DCAF11Q8TEB1 546 aa32.27■■■□□ 2.76
SCAMP3-202ENST00000355379 AGLP35573 1532 aa32.26■■■□□ 2.75
SCAMP3-202ENST00000355379 HIRIP3Q9BW71 556 aaPredicted RBP32.25■■■□□ 2.75
SCAMP3-202ENST00000355379 COL17A1Q9UMD9 1497 aaPredicted RBP32.23■■■□□ 2.75
SCAMP3-202ENST00000355379 PRAG1Q86YV5 1406 aa32.23■■■□□ 2.75
SCAMP3-202ENST00000355379 TRPM1Q7Z4N2 1603 aa32.22■■■□□ 2.75
SCAMP3-202ENST00000355379 KIF1BO60333 1816 aa32.22■■■□□ 2.75
SCAMP3-202ENST00000355379 WASHC2CQ9Y4E1 1318 aa32.2■■■□□ 2.75
SCAMP3-202ENST00000355379 ARHGEF40Q8TER5 1519 aa32.2■■■□□ 2.75
SCAMP3-202ENST00000355379 KDM2AQ9Y2K7 1162 aa32.2■■■□□ 2.74
SCAMP3-202ENST00000355379 NPATQ14207 1427 aa32.2■■■□□ 2.74
SCAMP3-202ENST00000355379 RGL3Q3MIN7 710 aa32.19■■■□□ 2.74
SCAMP3-202ENST00000355379 ZNF326Q5BKZ1 582 aaKnown RBP32.19■■■□□ 2.74
SCAMP3-202ENST00000355379 ARHGAP31Q2M1Z3 1444 aa32.18■■■□□ 2.74
SCAMP3-202ENST00000355379 STAC3Q96MF2 364 aa32.18■■■□□ 2.74
SCAMP3-202ENST00000355379 MIER1Q8N108 512 aa32.17■■■□□ 2.74
SCAMP3-202ENST00000355379 POLR1AO95602 1720 aaPredicted RBP32.17■■■□□ 2.74
SCAMP3-202ENST00000355379 CNTLNQ9NXG0 1405 aa32.16■■■□□ 2.74
SCAMP3-202ENST00000355379 LAMC1P11047 1609 aa32.14■■■□□ 2.74
SCAMP3-202ENST00000355379 PPP6R1Q9UPN7 881 aa32.11■■■□□ 2.73
SCAMP3-202ENST00000355379 NOS1P29475 1434 aa32.11■■■□□ 2.73
SCAMP3-202ENST00000355379 SIGLEC1Q9BZZ2 1709 aa32.1■■■□□ 2.73
SCAMP3-202ENST00000355379 DDX10Q13206 875 aaKnown RBP32.1■■■□□ 2.73
SCAMP3-202ENST00000355379 CFAP65Q6ZU64 1925 aaKnown RBP32.1■■■□□ 2.73
SCAMP3-202ENST00000355379 USP47Q96K76 1375 aa32.1■■■□□ 2.73
SCAMP3-202ENST00000355379 UGGT1Q9NYU2 1555 aa32.09■■■□□ 2.73
SCAMP3-202ENST00000355379 MADDQ8WXG6 1647 aa32.08■■■□□ 2.73
SCAMP3-202ENST00000355379 GPRASP1Q5JY77 1395 aa32.07■■■□□ 2.72
SCAMP3-202ENST00000355379 IFT172Q9UG01 1749 aa32.07■■■□□ 2.72
SCAMP3-202ENST00000355379 PIK3C2BO00750 1634 aa32.06■■■□□ 2.72
SCAMP3-202ENST00000355379 CARD11Q9BXL7 1154 aa32.05■■■□□ 2.72
SCAMP3-202ENST00000355379 MROH2AA6NES4 1674 aa32.05■■■□□ 2.72
SCAMP3-202ENST00000355379 ADGRB3O60242 1522 aa32.05■■■□□ 2.72
SCAMP3-202ENST00000355379 ROCK2O75116 1388 aaKnown RBP32.04■■■□□ 2.72
SCAMP3-202ENST00000355379 WASHC2AQ641Q2 1341 aa32.03■■■□□ 2.72
SCAMP3-202ENST00000355379 SYNMO15061 1565 aa32.02■■■□□ 2.72
SCAMP3-202ENST00000355379 PREX1Q8TCU6 1659 aa32.01■■■□□ 2.72
SCAMP3-202ENST00000355379 KIAA1210Q9ULL0 1709 aa32.01■■■□□ 2.71
SCAMP3-202ENST00000355379 MYOM2P54296 1465 aa32.01■■■□□ 2.71
SCAMP3-202ENST00000355379 CCDC7Q96M83 1385 aa32■■■□□ 2.71
SCAMP3-202ENST00000355379 DNAJC5Q9H3Z4 198 aa31.97■■■□□ 2.71
SCAMP3-202ENST00000355379 CLTCQ00610 1675 aaKnown RBP31.95■■■□□ 2.71
SCAMP3-202ENST00000355379 PPLO60437 1756 aa31.93■■■□□ 2.7
SCAMP3-202ENST00000355379 ARID4BQ4LE39 1312 aaPredicted RBP31.93■■■□□ 2.7
SCAMP3-202ENST00000355379 C11orf95C9JLR9 678 aaPredicted RBP31.93■■■□□ 2.7
SCAMP3-202ENST00000355379 NBPF1Q3BBV0 1214 aa31.91■■■□□ 2.7
SCAMP3-202ENST00000355379 NRXN1Q9ULB1 1477 aa31.9■■■□□ 2.7
SCAMP3-202ENST00000355379 RPGRIP1LQ68CZ1 1315 aa31.89■■■□□ 2.7
SCAMP3-202ENST00000355379 SLC52A1Q9NWF4 448 aa31.89■■■□□ 2.7
SCAMP3-202ENST00000355379 KIF7Q2M1P5 1343 aa31.87■■■□□ 2.69
SCAMP3-202ENST00000355379 TRHP20396 242 aaPredicted RBP31.87■■■□□ 2.69
SCAMP3-202ENST00000355379 IQGAP1P46940 1657 aa31.87■■■□□ 2.69
SCAMP3-202ENST00000355379 ERVK-7P63135 1459 aa31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms