RNA–Protein interactions for RNA: ENST00000354749.6

TTC3-201, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 9,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-201ENST00000354749 SAFB2Q14151 953 aaKnown RBP eCLIP8.07□□□□□ -1.12
TTC3-201ENST00000354749 DHX57Q6P158 1386 aaKnown RBP8.07□□□□□ -1.12
TTC3-201ENST00000354749 CHMP4CQ96CF2 233 aa8.07□□□□□ -1.12
TTC3-201ENST00000354749 SETQ01105 290 aaPredicted RBP8.06□□□□□ -1.12
TTC3-201ENST00000354749 SMARCA2P51531 1590 aa8.06□□□□□ -1.12
TTC3-201ENST00000354749 DDX49Q9Y6V7 483 aaKnown RBP8.06□□□□□ -1.12
TTC3-201ENST00000354749 A0A0U1RQG5 324 aaPredicted RBP8.06□□□□□ -1.12
TTC3-201ENST00000354749 CLUAP1Q96AJ1 413 aa8.06□□□□□ -1.12
TTC3-201ENST00000354749 SOX12O15370 315 aa8.06□□□□□ -1.12
TTC3-201ENST00000354749 E9PSI1 815 aa8.05□□□□□ -1.12
TTC3-201ENST00000354749 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.05□□□□□ -1.12
TTC3-201ENST00000354749 FOXD4L1Q9NU39 408 aa8.05□□□□□ -1.12
TTC3-201ENST00000354749 GPS2Q13227 327 aa8.05□□□□□ -1.12
TTC3-201ENST00000354749 PRKRIP1Q9H875 184 aaPredicted RBP8.05□□□□□ -1.12
TTC3-201ENST00000354749 ISY1Q9ULR0 285 aaKnown RBP8.05□□□□□ -1.12
TTC3-201ENST00000354749 NOL8Q76FK4 1167 aaKnown RBP8.04□□□□□ -1.12
TTC3-201ENST00000354749 VSIG10Q8N0Z9 540 aa8.04□□□□□ -1.12
TTC3-201ENST00000354749 TOP2AP11388 1531 aaKnown RBP8.04□□□□□ -1.12
TTC3-201ENST00000354749 NGEFQ8N5V2 710 aa8.04□□□□□ -1.12
TTC3-201ENST00000354749 RASSF8Q8NHQ8 419 aa8.04□□□□□ -1.12
TTC3-201ENST00000354749 GORABQ5T7V8 394 aa8.04□□□□□ -1.12
TTC3-201ENST00000354749 ZKSCAN2Q63HK3 967 aa8.04□□□□□ -1.12
TTC3-201ENST00000354749 CCDC146Q8IYE0 955 aa8.04□□□□□ -1.12
TTC3-201ENST00000354749 CCDC144AA2RUR9 1427 aa8.04□□□□□ -1.12
TTC3-201ENST00000354749 REC8O95072 547 aa8.04□□□□□ -1.12
TTC3-201ENST00000354749 USP47Q96K76 1375 aa8.03□□□□□ -1.12
TTC3-201ENST00000354749 UACAQ9BZF9 1416 aa8.03□□□□□ -1.12
TTC3-201ENST00000354749 RAPGEF2Q9Y4G8 1499 aa8.03□□□□□ -1.12
TTC3-201ENST00000354749 MROH2BQ7Z745 1585 aa8.02□□□□□ -1.12
TTC3-201ENST00000354749 NCBP3Q53F19 620 aaKnown RBP8.02□□□□□ -1.13
TTC3-201ENST00000354749 STK26Q9P289 416 aa8.02□□□□□ -1.13
TTC3-201ENST00000354749 GOLGA6L19H0YKK7 550 aa8.02□□□□□ -1.13
TTC3-201ENST00000354749 AAMPQ13685 434 aa8.02□□□□□ -1.13
TTC3-201ENST00000354749 CCDC70Q6NSX1 233 aa8.02□□□□□ -1.13
TTC3-201ENST00000354749 EXOC6Q8TAG9 804 aa8.02□□□□□ -1.13
TTC3-201ENST00000354749 BECN2A8MW95 431 aa8.02□□□□□ -1.13
TTC3-201ENST00000354749 FHOD3Q2V2M9 1422 aa8.01□□□□□ -1.13
TTC3-201ENST00000354749 TPM1P09493 284 aa8.01□□□□□ -1.13
TTC3-201ENST00000354749 H3BQV1 296 aa8.01□□□□□ -1.13
TTC3-201ENST00000354749 IFFO2Q5TF58 517 aa8.01□□□□□ -1.13
TTC3-201ENST00000354749 RSPH4AQ5TD94 716 aa8.01□□□□□ -1.13
TTC3-201ENST00000354749 SF3A1Q15459 793 aaKnown RBP8.01□□□□□ -1.13
TTC3-201ENST00000354749 EFCAB2Q5VUJ9 269 aa8.01□□□□□ -1.13
TTC3-201ENST00000354749 DDX19BQ9UMR2 479 aa8.01□□□□□ -1.13
TTC3-201ENST00000354749 ZNF771Q7L3S4 317 aaPredicted RBP8□□□□□ -1.13
TTC3-201ENST00000354749 FAM43AQ8N2R8 423 aa8□□□□□ -1.13
TTC3-201ENST00000354749 CHMP5Q9NZZ3 219 aa8□□□□□ -1.13
TTC3-201ENST00000354749 SLC4A10Q6U841 1118 aa8□□□□□ -1.13
TTC3-201ENST00000354749 MTERF4Q7Z6M4 381 aaKnown RBP8□□□□□ -1.13
TTC3-201ENST00000354749 TSR1Q2NL82 804 aaKnown RBP8□□□□□ -1.13
TTC3-201ENST00000354749 TEX35Q5T0J7 233 aa8□□□□□ -1.13
TTC3-201ENST00000354749 FOXD4L5Q5VV16 416 aaPredicted RBP8□□□□□ -1.13
TTC3-201ENST00000354749 FOXD4L4Q8WXT5 416 aaPredicted RBP8□□□□□ -1.13
TTC3-201ENST00000354749 ROCK1Q13464 1354 aa8□□□□□ -1.13
TTC3-201ENST00000354749 SLC4A3P48751 1232 aa8□□□□□ -1.13
TTC3-201ENST00000354749 CHMP3Q9Y3E7 222 aa7.99□□□□□ -1.13
TTC3-201ENST00000354749 CRBNQ96SW2 442 aa7.99□□□□□ -1.13
TTC3-201ENST00000354749 GGT6Q6P531 493 aa7.99□□□□□ -1.13
TTC3-201ENST00000354749 DIAPH3Q9NSV4 1193 aa7.99□□□□□ -1.13
TTC3-201ENST00000354749 ST20-MTHFSA0A0A6YYL1 179 aa7.98□□□□□ -1.13
TTC3-201ENST00000354749 FAM13BQ9NYF5 915 aa7.98□□□□□ -1.13
TTC3-201ENST00000354749 PANK3Q9H999 370 aa7.98□□□□□ -1.13
TTC3-201ENST00000354749 ZKSCAN1P17029 563 aaPredicted RBP7.98□□□□□ -1.13
TTC3-201ENST00000354749 ANKRD45Q5TZF3 282 aa7.98□□□□□ -1.13
TTC3-201ENST00000354749 CCAR2Q8N163 923 aaKnown RBP7.98□□□□□ -1.13
TTC3-201ENST00000354749 CEP89Q96ST8 783 aa7.98□□□□□ -1.13
TTC3-201ENST00000354749 PLIN1O60240 522 aa7.98□□□□□ -1.13
TTC3-201ENST00000354749 TPM2P07951 284 aa7.97□□□□□ -1.13
TTC3-201ENST00000354749 CSB-PGBD3P0DP91 1061 aa7.97□□□□□ -1.13
TTC3-201ENST00000354749 RUFY2Q8WXA3 655 aa7.97□□□□□ -1.13
TTC3-201ENST00000354749 IPO7O95373 1038 aaKnown RBP7.97□□□□□ -1.13
TTC3-201ENST00000354749 MAP7D2Q96T17 732 aa7.97□□□□□ -1.13
TTC3-201ENST00000354749 RRP7AQ9Y3A4 280 aaKnown RBP7.97□□□□□ -1.13
TTC3-201ENST00000354749 ZNF330Q9Y3S2 320 aaPredicted RBP7.97□□□□□ -1.13
TTC3-201ENST00000354749 NUCB2P80303 420 aa7.97□□□□□ -1.13
TTC3-201ENST00000354749 TAF7LQ5H9L4 462 aa7.97□□□□□ -1.13
TTC3-201ENST00000354749 ARGLU1Q9NWB6 273 aaPredicted RBP7.97□□□□□ -1.13
TTC3-201ENST00000354749 CREBRFQ8IUR6 639 aa7.97□□□□□ -1.13
TTC3-201ENST00000354749 FAM184AQ8NB25 1140 aa7.97□□□□□ -1.13
TTC3-201ENST00000354749 CNTLNQ9NXG0 1405 aa7.97□□□□□ -1.13
TTC3-201ENST00000354749 MRE11P49959 708 aa7.97□□□□□ -1.13
TTC3-201ENST00000354749 TPD52L1Q16890 204 aaPredicted RBP7.97□□□□□ -1.13
TTC3-201ENST00000354749 COG6Q9Y2V7 657 aa7.97□□□□□ -1.13
TTC3-201ENST00000354749 PDS5BQ9NTI5 1447 aa7.96□□□□□ -1.13
TTC3-201ENST00000354749 PAK3O75914 559 aaPredicted RBP7.96□□□□□ -1.13
TTC3-201ENST00000354749 LRRFIP1Q32MZ4 808 aaKnown RBP7.96□□□□□ -1.14
TTC3-201ENST00000354749 DZIP1LQ8IYY4 767 aaKnown RBP7.96□□□□□ -1.14
TTC3-201ENST00000354749 CCDC39Q9UFE4 941 aa7.96□□□□□ -1.14
TTC3-201ENST00000354749 ANKRD20A12PQ8NF67 263 aa7.96□□□□□ -1.14
TTC3-201ENST00000354749 ZNF592Q92610 1267 aa7.96□□□□□ -1.14
TTC3-201ENST00000354749 TOMM22Q9NS69 142 aa7.96□□□□□ -1.14
TTC3-201ENST00000354749 CUX1P39880 1505 aa7.95□□□□□ -1.14
TTC3-201ENST00000354749 RILPL2Q969X0 211 aa7.95□□□□□ -1.14
TTC3-201ENST00000354749 NOM1Q5C9Z4 860 aaKnown RBP7.95□□□□□ -1.14
TTC3-201ENST00000354749 PES1O00541 588 aaKnown RBP7.95□□□□□ -1.14
TTC3-201ENST00000354749 API5Q9BZZ5 524 aaKnown RBP7.95□□□□□ -1.14
TTC3-201ENST00000354749 HOOK1Q9UJC3 728 aaKnown RBP7.95□□□□□ -1.14
TTC3-201ENST00000354749 BCL2L13Q9BXK5 485 aa7.95□□□□□ -1.14
TTC3-201ENST00000354749 NFKBIBQ15653 356 aa7.95□□□□□ -1.14
TTC3-201ENST00000354749 MLECQ14165 292 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms