RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 ERICH6Q7L0X2 663 aa3.06□□□□□ -1.92
BRCA1-202ENST00000354071 JPH4Q96JJ6 628 aa3.06□□□□□ -1.92
BRCA1-202ENST00000354071 ERCC6L2Q5T890 1561 aa3.06□□□□□ -1.92
BRCA1-202ENST00000354071 POTEMA6NI47 508 aa3.06□□□□□ -1.92
BRCA1-202ENST00000354071 EVI5O60447 810 aa3.06□□□□□ -1.92
BRCA1-202ENST00000354071 EN1Q05925 392 aaPredicted RBP3.06□□□□□ -1.92
BRCA1-202ENST00000354071 TSR1Q2NL82 804 aaKnown RBP3.06□□□□□ -1.92
BRCA1-202ENST00000354071 FBXO31Q5XUX0 539 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-202ENST00000354071 ADAM33Q9BZ11 813 aa3.05□□□□□ -1.92
BRCA1-202ENST00000354071 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.05□□□□□ -1.92
BRCA1-202ENST00000354071 NUDT7P0C024 238 aa3.05□□□□□ -1.92
BRCA1-202ENST00000354071 DMRTA1Q5VZB9 504 aa3.05□□□□□ -1.92
BRCA1-202ENST00000354071 PLEKHG3A1L390 1219 aa3.04□□□□□ -1.92
BRCA1-202ENST00000354071 TRIM66O15016 1216 aa3.04□□□□□ -1.92
BRCA1-202ENST00000354071 ZMYND15Q9H091 742 aa3.04□□□□□ -1.92
BRCA1-202ENST00000354071 PHF14O94880 888 aa3.04□□□□□ -1.92
BRCA1-202ENST00000354071 PDE4DQ08499 809 aa3.04□□□□□ -1.92
BRCA1-202ENST00000354071 GPIHBP1Q8IV16 184 aa3.04□□□□□ -1.92
BRCA1-202ENST00000354071 REPIN1Q9BWE0 567 aaKnown RBP3.04□□□□□ -1.92
BRCA1-202ENST00000354071 CUX2O14529 1486 aa3.04□□□□□ -1.92
BRCA1-202ENST00000354071 KRI1Q8N9T8 703 aaKnown RBP3.04□□□□□ -1.92
BRCA1-202ENST00000354071 HS3ST6Q96QI5 342 aa3.04□□□□□ -1.92
BRCA1-202ENST00000354071 BCL2L12Q9HB09 334 aa3.04□□□□□ -1.92
BRCA1-202ENST00000354071 EYA1Q99502 592 aa3.03□□□□□ -1.92
BRCA1-202ENST00000354071 ZNF687Q8N1G0 1237 aa3.03□□□□□ -1.92
BRCA1-202ENST00000354071 SLC4A5Q9BY07 1137 aa3.03□□□□□ -1.92
BRCA1-202ENST00000354071 TSKSQ9UJT2 592 aa3.03□□□□□ -1.92
BRCA1-202ENST00000354071 ZBED2Q9BTP6 218 aa3.03□□□□□ -1.92
BRCA1-202ENST00000354071 CLUAP1Q96AJ1 413 aa3.03□□□□□ -1.93
BRCA1-202ENST00000354071 AK7Q96M32 723 aa3.03□□□□□ -1.93
BRCA1-202ENST00000354071 SCUBE2Q9NQ36 999 aa3.03□□□□□ -1.93
BRCA1-202ENST00000354071 APBB1O00213 710 aa3.02□□□□□ -1.93
BRCA1-202ENST00000354071 NECTIN2Q92692 538 aa3.02□□□□□ -1.93
BRCA1-202ENST00000354071 ZNF316A6NFI3 1004 aaPredicted RBP3.02□□□□□ -1.93
BRCA1-202ENST00000354071 GOLGA2Q08379 1002 aa3.02□□□□□ -1.93
BRCA1-202ENST00000354071 MARVELD3Q96A59 401 aa3.02□□□□□ -1.93
BRCA1-202ENST00000354071 TMC2Q8TDI7 906 aa3.01□□□□□ -1.93
BRCA1-202ENST00000354071 RSPH6AQ9H0K4 717 aa3.01□□□□□ -1.93
BRCA1-202ENST00000354071 C3orf67Q6ZVT6 689 aa3.01□□□□□ -1.93
BRCA1-202ENST00000354071 SPDYE16A6NNV3 312 aaPredicted RBP3.01□□□□□ -1.93
BRCA1-202ENST00000354071 POTEGQ6S5H5 508 aa3.01□□□□□ -1.93
BRCA1-202ENST00000354071 PARP9Q8IXQ6 854 aa3.01□□□□□ -1.93
BRCA1-202ENST00000354071 CCDC102AQ96A19 550 aa3□□□□□ -1.93
BRCA1-202ENST00000354071 RBM27Q9P2N5 1060 aaKnown RBP3□□□□□ -1.93
BRCA1-202ENST00000354071 PSEN2P49810 448 aa3□□□□□ -1.93
BRCA1-202ENST00000354071 DOK7Q18PE1 504 aa2.99□□□□□ -1.93
BRCA1-202ENST00000354071 CCDC82Q8N4S0 544 aa2.99□□□□□ -1.93
BRCA1-202ENST00000354071 GRXCR2A6NFK2 248 aa2.99□□□□□ -1.93
BRCA1-202ENST00000354071 ONECUT3O60422 494 aaPredicted RBP2.99□□□□□ -1.93
BRCA1-202ENST00000354071 C6orf132Q5T0Z8 1188 aa2.99□□□□□ -1.93
BRCA1-202ENST00000354071 NPM2Q86SE8 214 aaKnown RBP2.99□□□□□ -1.93
BRCA1-202ENST00000354071 VARS2Q5ST30 1063 aaKnown RBP2.98□□□□□ -1.93
BRCA1-202ENST00000354071 NLRP7Q8WX94 980 aa2.98□□□□□ -1.93
BRCA1-202ENST00000354071 DDX12PQ92771 950 aa2.98□□□□□ -1.93
BRCA1-202ENST00000354071 UPF1Q92900 1129 aaKnown RBP eCLIP2.98□□□□□ -1.93
BRCA1-202ENST00000354071 POM121Q96HA1 1249 aa2.98□□□□□ -1.93
BRCA1-202ENST00000354071 MS4A1P11836 297 aa2.98□□□□□ -1.93
BRCA1-202ENST00000354071 VPS9D1Q9Y2B5 631 aa2.98□□□□□ -1.93
BRCA1-202ENST00000354071 SMYD5Q6GMV2 418 aa2.98□□□□□ -1.93
BRCA1-202ENST00000354071 NUTM2FA1L443 756 aa2.97□□□□□ -1.93
BRCA1-202ENST00000354071 PROX2Q3B8N5 592 aa2.97□□□□□ -1.93
BRCA1-202ENST00000354071 ADGRG1Q9Y653 693 aa2.97□□□□□ -1.93
BRCA1-202ENST00000354071 AXIN2Q9Y2T1 843 aa2.97□□□□□ -1.93
BRCA1-202ENST00000354071 SNPHO15079 494 aa2.97□□□□□ -1.93
BRCA1-202ENST00000354071 AMHR2Q16671 573 aa2.97□□□□□ -1.93
BRCA1-202ENST00000354071 FAM161AQ3B820 660 aa2.96□□□□□ -1.94
BRCA1-202ENST00000354071 GPR37L1O60883 481 aa2.96□□□□□ -1.94
BRCA1-202ENST00000354071 IRF6O14896 467 aa2.96□□□□□ -1.94
BRCA1-202ENST00000354071 SPNS2Q8IVW8 549 aa2.96□□□□□ -1.94
BRCA1-202ENST00000354071 PXYLP1Q8TE99 480 aa2.96□□□□□ -1.94
BRCA1-202ENST00000354071 ZNF777Q9ULD5 760 aaPredicted RBP2.96□□□□□ -1.94
BRCA1-202ENST00000354071 TTLL12Q14166 644 aaPredicted RBP2.95□□□□□ -1.94
BRCA1-202ENST00000354071 ZDHHC16Q969W1 377 aa2.95□□□□□ -1.94
BRCA1-202ENST00000354071 PPP1R3GB7ZBB8 358 aa2.95□□□□□ -1.94
BRCA1-202ENST00000354071 LSM11P83369 360 aaKnown RBP eCLIP2.95□□□□□ -1.94
BRCA1-202ENST00000354071 METTL3Q86U44 580 aaKnown RBP2.95□□□□□ -1.94
BRCA1-202ENST00000354071 EPAS1Q99814 870 aa2.95□□□□□ -1.94
BRCA1-202ENST00000354071 EMID1Q96A84 441 aaPredicted RBP2.95□□□□□ -1.94
BRCA1-202ENST00000354071 ZNF428Q96B54 188 aa2.95□□□□□ -1.94
BRCA1-202ENST00000354071 TK2O00142 265 aa2.94□□□□□ -1.94
BRCA1-202ENST00000354071 ARHGAP33O14559 1287 aa2.94□□□□□ -1.94
BRCA1-202ENST00000354071 RANGAP1P46060 587 aaPredicted RBP2.94□□□□□ -1.94
BRCA1-202ENST00000354071 GIGYF2Q6Y7W6 1299 aaKnown RBP2.94□□□□□ -1.94
BRCA1-202ENST00000354071 CDAN1Q8IWY9 1227 aa2.94□□□□□ -1.94
BRCA1-202ENST00000354071 MAP2K5Q13163 448 aa2.94□□□□□ -1.94
BRCA1-202ENST00000354071 PROCA1Q8NCQ7 364 aaPredicted RBP2.94□□□□□ -1.94
BRCA1-202ENST00000354071 TRIM6-TRIM34B2RNG4 842 aa2.94□□□□□ -1.94
BRCA1-202ENST00000354071 PRSS12P56730 875 aa2.94□□□□□ -1.94
BRCA1-202ENST00000354071 MCM6Q14566 821 aa2.94□□□□□ -1.94
BRCA1-202ENST00000354071 TYW1BQ6NUM6 668 aa2.94□□□□□ -1.94
BRCA1-202ENST00000354071 PADI6Q6TGC4 694 aa2.93□□□□□ -1.94
BRCA1-202ENST00000354071 CDCA7LQ96GN5 454 aa2.93□□□□□ -1.94
BRCA1-202ENST00000354071 TRAK2O60296 914 aa2.93□□□□□ -1.94
BRCA1-202ENST00000354071 ADGRD1Q6QNK2 874 aa2.93□□□□□ -1.94
BRCA1-202ENST00000354071 FBXW7Q969H0 707 aa2.93□□□□□ -1.94
BRCA1-202ENST00000354071 FAM205CA6NFA0 338 aa2.93□□□□□ -1.94
BRCA1-202ENST00000354071 LMTK3Q96Q04 1460 aa2.93□□□□□ -1.94
BRCA1-202ENST00000354071 KDM6BO15054 1643 aa2.93□□□□□ -1.94
BRCA1-202ENST00000354071 GNPATO15228 680 aa2.93□□□□□ -1.94
BRCA1-202ENST00000354071 SLC10A3P09131 477 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms