RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 TEFQ10587 303 aa14.14□□□□□ -0.15
SLC6A20-201ENST00000353278 NLRP13Q86W25 1043 aa14.14□□□□□ -0.15
SLC6A20-201ENST00000353278 MINK1Q8N4C8 1332 aaPredicted RBP14.14□□□□□ -0.15
SLC6A20-201ENST00000353278 DNTTIP2Q5QJE6 756 aaKnown RBP14.12□□□□□ -0.15
SLC6A20-201ENST00000353278 CGNL1Q0VF96 1302 aa14.12□□□□□ -0.15
SLC6A20-201ENST00000353278 TTC5Q8N0Z6 440 aa14.11□□□□□ -0.15
SLC6A20-201ENST00000353278 B4GALNT3Q6L9W6 998 aa14.11□□□□□ -0.15
SLC6A20-201ENST00000353278 RCAN3Q9UKA8 241 aa14.11□□□□□ -0.15
SLC6A20-201ENST00000353278 FGD5Q6ZNL6 1462 aa14.1□□□□□ -0.15
SLC6A20-201ENST00000353278 PHLDB1Q86UU1 1377 aa14.09□□□□□ -0.15
SLC6A20-201ENST00000353278 ST20-MTHFSA0A0A6YYL1 179 aa14.08□□□□□ -0.16
SLC6A20-201ENST00000353278 GLIPR1L2Q4G1C9 344 aa14.07□□□□□ -0.16
SLC6A20-201ENST00000353278 CCDC146Q8IYE0 955 aa14.07□□□□□ -0.16
SLC6A20-201ENST00000353278 PMFBP1Q8TBY8 1022 aa14.07□□□□□ -0.16
SLC6A20-201ENST00000353278 SYTL4Q96C24 671 aaPredicted RBP14.07□□□□□ -0.16
SLC6A20-201ENST00000353278 PHF23Q9BUL5 403 aaPredicted RBP14.07□□□□□ -0.16
SLC6A20-201ENST00000353278 HTATSF1O43719 755 aaKnown RBP14.07□□□□□ -0.16
SLC6A20-201ENST00000353278 TRIM6-TRIM34B2RNG4 842 aa14.06□□□□□ -0.16
SLC6A20-201ENST00000353278 NCBP3Q53F19 620 aaKnown RBP14.06□□□□□ -0.16
SLC6A20-201ENST00000353278 CENPJQ9HC77 1338 aaPredicted RBP14.06□□□□□ -0.16
SLC6A20-201ENST00000353278 NEXNQ0ZGT2 675 aa14.06□□□□□ -0.16
SLC6A20-201ENST00000353278 RAD54L2Q9Y4B4 1467 aa14.05□□□□□ -0.16
SLC6A20-201ENST00000353278 TOMM22Q9NS69 142 aa14.05□□□□□ -0.16
SLC6A20-201ENST00000353278 MYOM3Q5VTT5 1437 aa14.05□□□□□ -0.16
SLC6A20-201ENST00000353278 CCDC34Q96HJ3 373 aa14.05□□□□□ -0.16
SLC6A20-201ENST00000353278 AQRO60306 1485 aaKnown RBP eCLIP14.05□□□□□ -0.16
SLC6A20-201ENST00000353278 STAC3Q96MF2 364 aa14.05□□□□□ -0.16
SLC6A20-201ENST00000353278 PANK3Q9H999 370 aa14.05□□□□□ -0.16
SLC6A20-201ENST00000353278 IGF1RP08069 1367 aa14.04□□□□□ -0.16
SLC6A20-201ENST00000353278 NCAPD3P42695 1498 aa14.04□□□□□ -0.16
SLC6A20-201ENST00000353278 CLUAP1Q96AJ1 413 aa14.03□□□□□ -0.16
SLC6A20-201ENST00000353278 RAPGEF4Q8WZA2 1011 aa14.03□□□□□ -0.16
SLC6A20-201ENST00000353278 PDE3BQ13370 1112 aa14.03□□□□□ -0.16
SLC6A20-201ENST00000353278 KIF15Q9NS87 1388 aa14.03□□□□□ -0.16
SLC6A20-201ENST00000353278 DHX57Q6P158 1386 aaKnown RBP14.02□□□□□ -0.16
SLC6A20-201ENST00000353278 DCAF8L1A6NGE4 600 aa14.02□□□□□ -0.17
SLC6A20-201ENST00000353278 GRIN2BQ13224 1484 aa14.01□□□□□ -0.17
SLC6A20-201ENST00000353278 HSP90B1P14625 803 aaKnown RBP14.01□□□□□ -0.17
SLC6A20-201ENST00000353278 CHAF1AQ13111 956 aaPredicted RBP14.01□□□□□ -0.17
SLC6A20-201ENST00000353278 L1TD1Q5T7N2 865 aaKnown RBP14.01□□□□□ -0.17
SLC6A20-201ENST00000353278 NOL10Q9BSC4 688 aaKnown RBP14□□□□□ -0.17
SLC6A20-201ENST00000353278 RRP7AQ9Y3A4 280 aaKnown RBP13.99□□□□□ -0.17
SLC6A20-201ENST00000353278 ELL2O00472 640 aaPredicted RBP13.99□□□□□ -0.17
SLC6A20-201ENST00000353278 NGEFQ8N5V2 710 aa13.99□□□□□ -0.17
SLC6A20-201ENST00000353278 DIAPH1O60610 1272 aaKnown RBP13.99□□□□□ -0.17
SLC6A20-201ENST00000353278 PROSER2Q86WR7 435 aaPredicted RBP13.99□□□□□ -0.17
SLC6A20-201ENST00000353278 MYBBP1AQ9BQG0 1328 aaKnown RBP13.99□□□□□ -0.17
SLC6A20-201ENST00000353278 RASSF8Q8NHQ8 419 aa13.98□□□□□ -0.17
SLC6A20-201ENST00000353278 DDX58O95786 925 aaKnown RBP13.98□□□□□ -0.17
SLC6A20-201ENST00000353278 LRRFIP1Q32MZ4 808 aaKnown RBP13.98□□□□□ -0.17
SLC6A20-201ENST00000353278 KLHL34Q8N239 644 aa13.98□□□□□ -0.17
SLC6A20-201ENST00000353278 NLRP2Q9NX02 1062 aa13.98□□□□□ -0.17
SLC6A20-201ENST00000353278 TXNDC2Q86VQ3 553 aa13.98□□□□□ -0.17
SLC6A20-201ENST00000353278 MARCH6O60337 910 aa13.97□□□□□ -0.17
SLC6A20-201ENST00000353278 EIF2S2P20042 333 aaKnown RBP13.97□□□□□ -0.17
SLC6A20-201ENST00000353278 KIF3AQ9Y496 699 aa13.97□□□□□ -0.17
SLC6A20-201ENST00000353278 KIAA2012Q0VF49 1180 aa13.97□□□□□ -0.17
SLC6A20-201ENST00000353278 AMOTL1Q8IY63 956 aa13.97□□□□□ -0.17
SLC6A20-201ENST00000353278 TRIM34Q9BYJ4 488 aa13.97□□□□□ -0.17
SLC6A20-201ENST00000353278 THEMISQ8N1K5 641 aaPredicted RBP13.97□□□□□ -0.17
SLC6A20-201ENST00000353278 ERICH6BQ5W0A0 696 aa13.96□□□□□ -0.17
SLC6A20-201ENST00000353278 SPRYD3Q8NCJ5 442 aa13.96□□□□□ -0.17
SLC6A20-201ENST00000353278 C9orf78Q9NZ63 289 aaPredicted RBP13.96□□□□□ -0.17
SLC6A20-201ENST00000353278 GPRASP1Q5JY77 1395 aa13.96□□□□□ -0.17
SLC6A20-201ENST00000353278 DRC7Q8IY82 874 aa13.96□□□□□ -0.17
SLC6A20-201ENST00000353278 PRG4Q92954 1404 aaPredicted RBP13.96□□□□□ -0.17
SLC6A20-201ENST00000353278 VPS53Q5VIR6 699 aa13.95□□□□□ -0.18
SLC6A20-201ENST00000353278 AFAP1Q8N556 730 aa13.95□□□□□ -0.18
SLC6A20-201ENST00000353278 NOP58Q9Y2X3 529 aaKnown RBP13.95□□□□□ -0.18
SLC6A20-201ENST00000353278 SYNJ2O15056 1496 aa13.95□□□□□ -0.18
SLC6A20-201ENST00000353278 MIA2Q96PC5 1412 aa13.94□□□□□ -0.18
SLC6A20-201ENST00000353278 NLRP6P59044 892 aa13.94□□□□□ -0.18
SLC6A20-201ENST00000353278 GBP4Q96PP9 640 aa13.94□□□□□ -0.18
SLC6A20-201ENST00000353278 USP47Q96K76 1375 aa13.94□□□□□ -0.18
SLC6A20-201ENST00000353278 WASHC2AQ641Q2 1341 aa13.94□□□□□ -0.18
SLC6A20-201ENST00000353278 VPS37DQ86XT2 251 aa13.94□□□□□ -0.18
SLC6A20-201ENST00000353278 CTDP1Q9Y5B0 961 aaPredicted RBP13.93□□□□□ -0.18
SLC6A20-201ENST00000353278 CHMP4CQ96CF2 233 aa13.93□□□□□ -0.18
SLC6A20-201ENST00000353278 RUSC2Q8N2Y8 1516 aa13.93□□□□□ -0.18
SLC6A20-201ENST00000353278 MRC2Q9UBG0 1479 aa13.93□□□□□ -0.18
SLC6A20-201ENST00000353278 ZNF644Q9H582 1327 aaPredicted RBP13.92□□□□□ -0.18
SLC6A20-201ENST00000353278 PTMSP20962 102 aa13.92□□□□□ -0.18
SLC6A20-201ENST00000353278 E9PSI1 815 aa13.92□□□□□ -0.18
SLC6A20-201ENST00000353278 SF3B2Q13435 895 aaKnown RBP13.92□□□□□ -0.18
SLC6A20-201ENST00000353278 MFAP1P55081 439 aaKnown RBP13.91□□□□□ -0.18
SLC6A20-201ENST00000353278 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.91□□□□□ -0.18
SLC6A20-201ENST00000353278 ARHGAP5Q13017 1502 aa13.91□□□□□ -0.18
SLC6A20-201ENST00000353278 ZKSCAN2Q63HK3 967 aa13.91□□□□□ -0.18
SLC6A20-201ENST00000353278 TCERG1O14776 1098 aaKnown RBP13.9□□□□□ -0.18
SLC6A20-201ENST00000353278 ANKRD50Q9ULJ7 1429 aa13.9□□□□□ -0.18
SLC6A20-201ENST00000353278 AKAP17AQ02040 695 aaKnown RBP13.9□□□□□ -0.18
SLC6A20-201ENST00000353278 ESCO1Q5FWF5 840 aa13.9□□□□□ -0.18
SLC6A20-201ENST00000353278 RBM33Q96EV2 1170 aaKnown RBP13.9□□□□□ -0.18
SLC6A20-201ENST00000353278 IFT140Q96RY7 1462 aa13.9□□□□□ -0.18
SLC6A20-201ENST00000353278 TPM4P67936 248 aa13.9□□□□□ -0.18
SLC6A20-201ENST00000353278 KIF16BQ96L93 1317 aa13.9□□□□□ -0.18
SLC6A20-201ENST00000353278 POGZQ7Z3K3 1410 aa13.9□□□□□ -0.18
SLC6A20-201ENST00000353278 SYAP1Q96A49 352 aaPredicted RBP13.9□□□□□ -0.18
SLC6A20-201ENST00000353278 SYNE3Q6ZMZ3 975 aa13.89□□□□□ -0.19
SLC6A20-201ENST00000353278 FBXW7Q969H0 707 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms