RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 HIRIP3Q9BW71 556 aaPredicted RBP26.18■■□□□ 1.78
TRIM41-202ENST00000351937 KDM5CP41229 1560 aa26.17■■□□□ 1.78
TRIM41-202ENST00000351937 DEPDC5O75140 1603 aa26.17■■□□□ 1.78
TRIM41-202ENST00000351937 KIDINS220Q9ULH0 1771 aa26.16■■□□□ 1.78
TRIM41-202ENST00000351937 EIF2AK4Q9P2K8 1649 aaKnown RBP26.16■■□□□ 1.78
TRIM41-202ENST00000351937 MAP3K4Q9Y6R4 1608 aa26.15■■□□□ 1.78
TRIM41-202ENST00000351937 CCDC144AA2RUR9 1427 aa26.14■■□□□ 1.78
TRIM41-202ENST00000351937 ATP10AO60312 1499 aa26.14■■□□□ 1.78
TRIM41-202ENST00000351937 EIF4G2P78344 907 aaKnown RBP eCLIP26.14■■□□□ 1.77
TRIM41-202ENST00000351937 PLA2R1Q13018 1463 aa26.14■■□□□ 1.77
TRIM41-202ENST00000351937 MLH3Q9UHC1 1453 aa26.14■■□□□ 1.77
TRIM41-202ENST00000351937 HSPA5P11021 654 aaKnown RBP26.11■■□□□ 1.77
TRIM41-202ENST00000351937 UHRF1BP1Q6BDS2 1440 aa26.1■■□□□ 1.77
TRIM41-202ENST00000351937 KANK1Q14678 1352 aa26.1■■□□□ 1.77
TRIM41-202ENST00000351937 KIF3BO15066 747 aa26.09■■□□□ 1.77
TRIM41-202ENST00000351937 DDX10Q13206 875 aaKnown RBP26.08■■□□□ 1.77
TRIM41-202ENST00000351937 VWDEQ8N2E2 1590 aa26.08■■□□□ 1.77
TRIM41-202ENST00000351937 HECW2Q9P2P5 1572 aa26.08■■□□□ 1.77
TRIM41-202ENST00000351937 A2MP01023 1474 aa26.07■■□□□ 1.76
TRIM41-202ENST00000351937 PRDM15P57071 1507 aaPredicted RBP26.05■■□□□ 1.76
TRIM41-202ENST00000351937 DIP2BQ9P265 1576 aa26.04■■□□□ 1.76
TRIM41-202ENST00000351937 TET3O43151 1660 aa26.03■■□□□ 1.76
TRIM41-202ENST00000351937 FAM69CQ0P6D2 419 aa26.03■■□□□ 1.76
TRIM41-202ENST00000351937 E9PCH4 1651 aa26.03■■□□□ 1.76
TRIM41-202ENST00000351937 MROH1Q8NDA8 1641 aa26.02■■□□□ 1.76
TRIM41-202ENST00000351937 CENPBP07199 599 aaPredicted RBP26.01■■□□□ 1.76
TRIM41-202ENST00000351937 SPATA31E1Q6ZUB1 1445 aa26.01■■□□□ 1.75
TRIM41-202ENST00000351937 DCAF11Q8TEB1 546 aa26.01■■□□□ 1.75
TRIM41-202ENST00000351937 RAPGEF3O95398 923 aa26■■□□□ 1.75
TRIM41-202ENST00000351937 ZNF326Q5BKZ1 582 aaKnown RBP26■■□□□ 1.75
TRIM41-202ENST00000351937 PTPRTO14522 1441 aa25.98■■□□□ 1.75
TRIM41-202ENST00000351937 RALGAPBQ86X10 1494 aa25.98■■□□□ 1.75
TRIM41-202ENST00000351937 RNF17Q9BXT8 1623 aaKnown RBP25.97■■□□□ 1.75
TRIM41-202ENST00000351937 FRMPD1Q5SYB0 1578 aa25.97■■□□□ 1.75
TRIM41-202ENST00000351937 RICTORQ6R327 1708 aa25.97■■□□□ 1.75
TRIM41-202ENST00000351937 TRPM2O94759 1503 aa25.97■■□□□ 1.75
TRIM41-202ENST00000351937 ABCA6Q8N139 1617 aa25.96■■□□□ 1.75
TRIM41-202ENST00000351937 KDM2AQ9Y2K7 1162 aa25.96■■□□□ 1.75
TRIM41-202ENST00000351937 BCORL1Q5H9F3 1711 aa25.94■■□□□ 1.74
TRIM41-202ENST00000351937 LMTK2Q8IWU2 1503 aa25.94■■□□□ 1.74
TRIM41-202ENST00000351937 WASHC2AQ641Q2 1341 aa25.93■■□□□ 1.74
TRIM41-202ENST00000351937 SPHKAPQ2M3C7 1700 aa25.93■■□□□ 1.74
TRIM41-202ENST00000351937 RGL3Q3MIN7 710 aa25.92■■□□□ 1.74
TRIM41-202ENST00000351937 PRAG1Q86YV5 1406 aa25.9■■□□□ 1.74
TRIM41-202ENST00000351937 DIP2CQ9Y2E4 1556 aa25.9■■□□□ 1.74
TRIM41-202ENST00000351937 USP47Q96K76 1375 aa25.9■■□□□ 1.74
TRIM41-202ENST00000351937 EFCAB6Q5THR3 1501 aa25.89■■□□□ 1.74
TRIM41-202ENST00000351937 YTHDC1Q96MU7 727 aaKnown RBP25.87■■□□□ 1.73
TRIM41-202ENST00000351937 PPRC1Q5VV67 1664 aaKnown RBP25.86■■□□□ 1.73
TRIM41-202ENST00000351937 CARD11Q9BXL7 1154 aa25.86■■□□□ 1.73
TRIM41-202ENST00000351937 CCDC7Q96M83 1385 aa25.86■■□□□ 1.73
TRIM41-202ENST00000351937 ZMYM4Q5VZL5 1548 aa25.85■■□□□ 1.73
TRIM41-202ENST00000351937 CEP152O94986 1710 aa25.84■■□□□ 1.73
TRIM41-202ENST00000351937 CLTCL1P53675 1640 aa25.84■■□□□ 1.73
TRIM41-202ENST00000351937 C11orf95C9JLR9 678 aaPredicted RBP25.84■■□□□ 1.73
TRIM41-202ENST00000351937 GGT6Q6P531 493 aa25.83■■□□□ 1.73
TRIM41-202ENST00000351937 TRPM1Q7Z4N2 1603 aa25.83■■□□□ 1.72
TRIM41-202ENST00000351937 ANP32CO43423 234 aa25.82■■□□□ 1.72
TRIM41-202ENST00000351937 ROCK2O75116 1388 aaKnown RBP25.82■■□□□ 1.72
TRIM41-202ENST00000351937 STAC3Q96MF2 364 aa25.82■■□□□ 1.72
TRIM41-202ENST00000351937 TSPOAP1O95153 1857 aa25.82■■□□□ 1.72
TRIM41-202ENST00000351937 NEURL4Q96JN8 1562 aa25.81■■□□□ 1.72
TRIM41-202ENST00000351937 POLR1AO95602 1720 aaPredicted RBP25.81■■□□□ 1.72
TRIM41-202ENST00000351937 YEATS2Q9ULM3 1422 aa25.81■■□□□ 1.72
TRIM41-202ENST00000351937 GTF3C3Q9Y5Q9 886 aa25.8■■□□□ 1.72
TRIM41-202ENST00000351937 GPRASP1Q5JY77 1395 aa25.78■■□□□ 1.72
TRIM41-202ENST00000351937 KIF7Q2M1P5 1343 aa25.78■■□□□ 1.72
TRIM41-202ENST00000351937 WASHC2CQ9Y4E1 1318 aa25.78■■□□□ 1.72
TRIM41-202ENST00000351937 ABCC3O15438 1527 aa25.77■■□□□ 1.72
TRIM41-202ENST00000351937 ARID4BQ4LE39 1312 aaPredicted RBP25.76■■□□□ 1.71
TRIM41-202ENST00000351937 KIF13AQ9H1H9 1805 aa25.76■■□□□ 1.71
TRIM41-202ENST00000351937 CNTLNQ9NXG0 1405 aa25.75■■□□□ 1.71
TRIM41-202ENST00000351937 NPATQ14207 1427 aa25.75■■□□□ 1.71
TRIM41-202ENST00000351937 LAMC1P11047 1609 aa25.74■■□□□ 1.71
TRIM41-202ENST00000351937 CCER2I3L3R5 266 aa25.73■■□□□ 1.71
TRIM41-202ENST00000351937 NBPF1Q3BBV0 1214 aa25.71■■□□□ 1.71
TRIM41-202ENST00000351937 ST20-MTHFSA0A0A6YYL1 179 aa25.7■■□□□ 1.7
TRIM41-202ENST00000351937 CAMSAP1Q5T5Y3 1602 aa25.7■■□□□ 1.7
TRIM41-202ENST00000351937 UGGT1Q9NYU2 1555 aa25.69■■□□□ 1.7
TRIM41-202ENST00000351937 ZC3H13Q5T200 1668 aaKnown RBP25.69■■□□□ 1.7
TRIM41-202ENST00000351937 MADDQ8WXG6 1647 aa25.69■■□□□ 1.7
TRIM41-202ENST00000351937 KIF1BO60333 1816 aa25.68■■□□□ 1.7
TRIM41-202ENST00000351937 REREQ9P2R6 1566 aa25.68■■□□□ 1.7
TRIM41-202ENST00000351937 ARHGAP31Q2M1Z3 1444 aa25.67■■□□□ 1.7
TRIM41-202ENST00000351937 NOS1P29475 1434 aa25.63■■□□□ 1.69
TRIM41-202ENST00000351937 MYOM2P54296 1465 aa25.62■■□□□ 1.69
TRIM41-202ENST00000351937 AGLP35573 1532 aa25.62■■□□□ 1.69
TRIM41-202ENST00000351937 ADGRB3O60242 1522 aa25.61■■□□□ 1.69
TRIM41-202ENST00000351937 COL17A1Q9UMD9 1497 aaPredicted RBP25.6■■□□□ 1.69
TRIM41-202ENST00000351937 PPP6R1Q9UPN7 881 aa25.58■■□□□ 1.69
TRIM41-202ENST00000351937 MROH2AA6NES4 1674 aa25.58■■□□□ 1.69
TRIM41-202ENST00000351937 SIGLEC1Q9BZZ2 1709 aa25.57■■□□□ 1.68
TRIM41-202ENST00000351937 IFT172Q9UG01 1749 aa25.57■■□□□ 1.68
TRIM41-202ENST00000351937 KIAA1210Q9ULL0 1709 aa25.57■■□□□ 1.68
TRIM41-202ENST00000351937 CFAP65Q6ZU64 1925 aaKnown RBP25.56■■□□□ 1.68
TRIM41-202ENST00000351937 POLR3GLQ9BT43 218 aa25.55■■□□□ 1.68
TRIM41-202ENST00000351937 PIK3C2BO00750 1634 aa25.54■■□□□ 1.68
TRIM41-202ENST00000351937 ARHGEF40Q8TER5 1519 aa25.54■■□□□ 1.68
TRIM41-202ENST00000351937 SYNMO15061 1565 aa25.54■■□□□ 1.68
TRIM41-202ENST00000351937 RPGRIP1LQ68CZ1 1315 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms