RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 PLEKHH2Q8IVE3 1493 aa22.73■■□□□ 1.23
PDAP1-201ENST00000350498 UHRF1BP1Q6BDS2 1440 aa22.72■■□□□ 1.23
PDAP1-201ENST00000350498 RALGAPBQ86X10 1494 aa22.71■■□□□ 1.23
PDAP1-201ENST00000350498 PLA2R1Q13018 1463 aa22.71■■□□□ 1.23
PDAP1-201ENST00000350498 ABCC2Q92887 1545 aa22.7■■□□□ 1.23
PDAP1-201ENST00000350498 ROCK2O75116 1388 aaKnown RBP22.67■■□□□ 1.22
PDAP1-201ENST00000350498 RSPH4AQ5TD94 716 aa22.66■■□□□ 1.22
PDAP1-201ENST00000350498 B4GALNT3Q6L9W6 998 aa22.65■■□□□ 1.22
PDAP1-201ENST00000350498 CCDC144AA2RUR9 1427 aa22.65■■□□□ 1.22
PDAP1-201ENST00000350498 AFAP1Q8N556 730 aa22.64■■□□□ 1.22
PDAP1-201ENST00000350498 MYO5CQ9NQX4 1742 aa22.64■■□□□ 1.21
PDAP1-201ENST00000350498 TRAPPC8Q9Y2L5 1435 aa22.63■■□□□ 1.21
PDAP1-201ENST00000350498 ZCCHC11Q5TAX3 1644 aaKnown RBP22.62■■□□□ 1.21
PDAP1-201ENST00000350498 ZBED9Q6R2W3 1325 aa22.62■■□□□ 1.21
PDAP1-201ENST00000350498 PRAG1Q86YV5 1406 aa22.59■■□□□ 1.21
PDAP1-201ENST00000350498 A2MP01023 1474 aa22.58■■□□□ 1.21
PDAP1-201ENST00000350498 PLCH2O75038 1416 aa22.58■■□□□ 1.21
PDAP1-201ENST00000350498 EFCAB2Q5VUJ9 269 aa22.58■■□□□ 1.2
PDAP1-201ENST00000350498 UNC13BO14795 1591 aa22.56■■□□□ 1.2
PDAP1-201ENST00000350498 MAST1Q9Y2H9 1570 aa22.56■■□□□ 1.2
PDAP1-201ENST00000350498 PPP4R2Q9NY27 417 aa22.56■■□□□ 1.2
PDAP1-201ENST00000350498 CLASP1Q7Z460 1538 aa22.55■■□□□ 1.2
PDAP1-201ENST00000350498 PNISRQ8TF01 805 aaKnown RBP22.55■■□□□ 1.2
PDAP1-201ENST00000350498 TMC1Q8TDI8 760 aa22.55■■□□□ 1.2
PDAP1-201ENST00000350498 TRPM1Q7Z4N2 1603 aa22.53■■□□□ 1.2
PDAP1-201ENST00000350498 ARID4BQ4LE39 1312 aaPredicted RBP22.53■■□□□ 1.2
PDAP1-201ENST00000350498 SALL2Q9Y467 1007 aaPredicted RBP22.51■■□□□ 1.19
PDAP1-201ENST00000350498 PLXNC1O60486 1568 aa22.5■■□□□ 1.19
PDAP1-201ENST00000350498 DISP3Q9P2K9 1392 aa22.5■■□□□ 1.19
PDAP1-201ENST00000350498 IQGAP3Q86VI3 1631 aa22.5■■□□□ 1.19
PDAP1-201ENST00000350498 DUOX2Q9NRD8 1548 aa22.49■■□□□ 1.19
PDAP1-201ENST00000350498 SPAG9O60271 1321 aaKnown RBP22.48■■□□□ 1.19
PDAP1-201ENST00000350498 TESK2Q96S53 571 aa22.48■■□□□ 1.19
PDAP1-201ENST00000350498 ABCC1P33527 1531 aa22.48■■□□□ 1.19
PDAP1-201ENST00000350498 MYT1LQ9UL68 1186 aa22.47■■□□□ 1.19
PDAP1-201ENST00000350498 CC2D1BQ5T0F9 858 aaKnown RBP22.46■■□□□ 1.19
PDAP1-201ENST00000350498 FANCIQ9NVI1 1328 aa22.45■■□□□ 1.18
PDAP1-201ENST00000350498 PER1O15534 1290 aaPredicted RBP22.43■■□□□ 1.18
PDAP1-201ENST00000350498 ERBINQ96RT1 1412 aa22.43■■□□□ 1.18
PDAP1-201ENST00000350498 UHRF1BP1LA0JNW5 1464 aa22.43■■□□□ 1.18
PDAP1-201ENST00000350498 E9PCH4 1651 aa22.42■■□□□ 1.18
PDAP1-201ENST00000350498 MYBBP1AQ9BQG0 1328 aaKnown RBP22.41■■□□□ 1.18
PDAP1-201ENST00000350498 MAGI2Q86UL8 1455 aa22.41■■□□□ 1.18
PDAP1-201ENST00000350498 PANK3Q9H999 370 aa22.4■■□□□ 1.18
PDAP1-201ENST00000350498 ERICH6BQ5W0A0 696 aa22.4■■□□□ 1.18
PDAP1-201ENST00000350498 GPRASP1Q5JY77 1395 aa22.4■■□□□ 1.18
PDAP1-201ENST00000350498 NUDCQ9Y266 331 aa22.39■■□□□ 1.18
PDAP1-201ENST00000350498 SMG6Q86US8 1419 aaKnown RBP22.38■■□□□ 1.17
PDAP1-201ENST00000350498 KIF3BO15066 747 aa22.37■■□□□ 1.17
PDAP1-201ENST00000350498 RALBP1Q15311 655 aa22.36■■□□□ 1.17
PDAP1-201ENST00000350498 BCL11AQ9H165 835 aa22.36■■□□□ 1.17
PDAP1-201ENST00000350498 PRDM15P57071 1507 aaPredicted RBP22.36■■□□□ 1.17
PDAP1-201ENST00000350498 SCAPERQ9BY12 1400 aa22.36■■□□□ 1.17
PDAP1-201ENST00000350498 ERICH6Q7L0X2 663 aa22.35■■□□□ 1.17
PDAP1-201ENST00000350498 ZFYVE16Q7Z3T8 1539 aa22.35■■□□□ 1.17
PDAP1-201ENST00000350498 LRPPRCP42704 1394 aaKnown RBP22.35■■□□□ 1.17
PDAP1-201ENST00000350498 FANCAO15360 1455 aa22.34■■□□□ 1.17
PDAP1-201ENST00000350498 ATP10AO60312 1499 aa22.34■■□□□ 1.17
PDAP1-201ENST00000350498 COL17A1Q9UMD9 1497 aaPredicted RBP22.34■■□□□ 1.17
PDAP1-201ENST00000350498 WDR7Q9Y4E6 1490 aa22.33■■□□□ 1.17
PDAP1-201ENST00000350498 BRD4O60885 1362 aaPredicted RBP22.33■■□□□ 1.17
PDAP1-201ENST00000350498 KTN1Q86UP2 1357 aaKnown RBP22.33■■□□□ 1.17
PDAP1-201ENST00000350498 PARD3Q8TEW0 1356 aa22.33■■□□□ 1.16
PDAP1-201ENST00000350498 UGGT1Q9NYU2 1555 aa22.3■■□□□ 1.16
PDAP1-201ENST00000350498 TMF1P82094 1093 aa22.29■■□□□ 1.16
PDAP1-201ENST00000350498 NLRP13Q86W25 1043 aa22.29■■□□□ 1.16
PDAP1-201ENST00000350498 CDCA7LQ96GN5 454 aa22.29■■□□□ 1.16
PDAP1-201ENST00000350498 CLTCL1P53675 1640 aa22.28■■□□□ 1.16
PDAP1-201ENST00000350498 ASXL2Q76L83 1435 aa22.27■■□□□ 1.16
PDAP1-201ENST00000350498 ADGRL1O94910 1474 aa22.27■■□□□ 1.15
PDAP1-201ENST00000350498 ATP7AQ04656 1500 aa22.26■■□□□ 1.15
PDAP1-201ENST00000350498 RTEL1-TNFRSF6BF6WH68 1400 aa22.26■■□□□ 1.15
PDAP1-201ENST00000350498 CCDC136Q96JN2 1154 aa22.25■■□□□ 1.15
PDAP1-201ENST00000350498 MADDQ8WXG6 1647 aa22.25■■□□□ 1.15
PDAP1-201ENST00000350498 RNF123Q5XPI4 1314 aa22.24■■□□□ 1.15
PDAP1-201ENST00000350498 EIF2AK4Q9P2K8 1649 aaKnown RBP22.23■■□□□ 1.15
PDAP1-201ENST00000350498 CFAP70Q5T0N1 1121 aa22.23■■□□□ 1.15
PDAP1-201ENST00000350498 ABCA9Q8IUA7 1624 aa22.23■■□□□ 1.15
PDAP1-201ENST00000350498 LAMC1P11047 1609 aa22.23■■□□□ 1.15
PDAP1-201ENST00000350498 SPHKAPQ2M3C7 1700 aa22.23■■□□□ 1.15
PDAP1-201ENST00000350498 PAK3O75914 559 aaPredicted RBP22.22■■□□□ 1.15
PDAP1-201ENST00000350498 TRPM2O94759 1503 aa22.22■■□□□ 1.15
PDAP1-201ENST00000350498 PTPRTO14522 1441 aa22.21■■□□□ 1.15
PDAP1-201ENST00000350498 RNF17Q9BXT8 1623 aaKnown RBP22.21■■□□□ 1.15
PDAP1-201ENST00000350498 ADGRF5Q8IZF2 1346 aa22.21■■□□□ 1.15
PDAP1-201ENST00000350498 INO80Q9ULG1 1556 aaPredicted RBP22.2■■□□□ 1.15
PDAP1-201ENST00000350498 DEPDC5O75140 1603 aa22.19■■□□□ 1.14
PDAP1-201ENST00000350498 CFAP65Q6ZU64 1925 aaKnown RBP22.18■■□□□ 1.14
PDAP1-201ENST00000350498 CEP152O94986 1710 aa22.18■■□□□ 1.14
PDAP1-201ENST00000350498 ARAP3Q8WWN8 1544 aa22.18■■□□□ 1.14
PDAP1-201ENST00000350498 CHGAP10645 457 aaKnown RBP22.17■■□□□ 1.14
PDAP1-201ENST00000350498 MROH1Q8NDA8 1641 aa22.16■■□□□ 1.14
PDAP1-201ENST00000350498 SENP3Q9H4L4 574 aaPredicted RBP22.16■■□□□ 1.14
PDAP1-201ENST00000350498 KANK1Q14678 1352 aa22.16■■□□□ 1.14
PDAP1-201ENST00000350498 ADAMTS8Q9UP79 889 aa22.16■■□□□ 1.14
PDAP1-201ENST00000350498 TET3O43151 1660 aa22.15■■□□□ 1.14
PDAP1-201ENST00000350498 IQGAP1P46940 1657 aa22.15■■□□□ 1.14
PDAP1-201ENST00000350498 GGT6Q6P531 493 aa22.15■■□□□ 1.14
PDAP1-201ENST00000350498 PLIN1O60240 522 aa22.14■■□□□ 1.14
PDAP1-201ENST00000350498 EXOC6Q8TAG9 804 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms