RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 TRPM1Q7Z4N2 1603 aa24.2■■□□□ 1.46
KRCC1-201ENST00000347055 PPM1GO15355 546 aaPredicted RBP24.19■■□□□ 1.46
KRCC1-201ENST00000347055 C9orf84Q5VXU9 1444 aa24.18■■□□□ 1.46
KRCC1-201ENST00000347055 BLMP54132 1417 aaPredicted RBP24.17■■□□□ 1.46
KRCC1-201ENST00000347055 BACH2Q9BYV9 841 aa24.17■■□□□ 1.46
KRCC1-201ENST00000347055 PDE4AP27815 886 aa24.16■■□□□ 1.46
KRCC1-201ENST00000347055 EIF4G3O43432 1585 aaKnown RBP24.16■■□□□ 1.46
KRCC1-201ENST00000347055 NUP155O75694 1391 aa24.15■■□□□ 1.46
KRCC1-201ENST00000347055 DDRGK1Q96HY6 314 aa24.15■■□□□ 1.46
KRCC1-201ENST00000347055 ABCC10Q5T3U5 1492 aa24.15■■□□□ 1.46
KRCC1-201ENST00000347055 POLR3GLQ9BT43 218 aa24.14■■□□□ 1.46
KRCC1-201ENST00000347055 GPRASP1Q5JY77 1395 aa24.14■■□□□ 1.45
KRCC1-201ENST00000347055 ZNF326Q5BKZ1 582 aaKnown RBP24.13■■□□□ 1.45
KRCC1-201ENST00000347055 MAGI1Q96QZ7 1491 aaPredicted RBP24.12■■□□□ 1.45
KRCC1-201ENST00000347055 EXOC6Q8TAG9 804 aa24.12■■□□□ 1.45
KRCC1-201ENST00000347055 EIF2AK4Q9P2K8 1649 aaKnown RBP24.12■■□□□ 1.45
KRCC1-201ENST00000347055 ST20-MTHFSA0A0A6YYL1 179 aa24.11■■□□□ 1.45
KRCC1-201ENST00000347055 ARID3CA6NKF2 412 aa24.11■■□□□ 1.45
KRCC1-201ENST00000347055 COL17A1Q9UMD9 1497 aaPredicted RBP24.1■■□□□ 1.45
KRCC1-201ENST00000347055 CARMIL2Q6F5E8 1435 aa24.1■■□□□ 1.45
KRCC1-201ENST00000347055 PRAG1Q86YV5 1406 aa24.09■■□□□ 1.45
KRCC1-201ENST00000347055 PRDM15P57071 1507 aaPredicted RBP24.08■■□□□ 1.45
KRCC1-201ENST00000347055 ABCA8O94911 1581 aa24.07■■□□□ 1.44
KRCC1-201ENST00000347055 PLB1Q6P1J6 1458 aa24.07■■□□□ 1.44
KRCC1-201ENST00000347055 ZNF608Q9ULD9 1512 aaPredicted RBP24.06■■□□□ 1.44
KRCC1-201ENST00000347055 FAM135AQ9P2D6 1515 aa24.05■■□□□ 1.44
KRCC1-201ENST00000347055 NUP160Q12769 1436 aa24.04■■□□□ 1.44
KRCC1-201ENST00000347055 UNC13BO14795 1591 aa24.04■■□□□ 1.44
KRCC1-201ENST00000347055 MAST1Q9Y2H9 1570 aa24.02■■□□□ 1.44
KRCC1-201ENST00000347055 PER1O15534 1290 aaPredicted RBP24.01■■□□□ 1.43
KRCC1-201ENST00000347055 SYNJ2O15056 1496 aa24.01■■□□□ 1.43
KRCC1-201ENST00000347055 TSPY4P0CV99 314 aa24■■□□□ 1.43
KRCC1-201ENST00000347055 TSPY10P0CW01 314 aa24■■□□□ 1.43
KRCC1-201ENST00000347055 CCDC141Q6ZP82 1450 aa23.99■■□□□ 1.43
KRCC1-201ENST00000347055 NEFMP07197 916 aa23.99■■□□□ 1.43
KRCC1-201ENST00000347055 RSPH4AQ5TD94 716 aa23.99■■□□□ 1.43
KRCC1-201ENST00000347055 DCAF11Q8TEB1 546 aa23.98■■□□□ 1.43
KRCC1-201ENST00000347055 CLASP1Q7Z460 1538 aa23.98■■□□□ 1.43
KRCC1-201ENST00000347055 CCDC144AA2RUR9 1427 aa23.98■■□□□ 1.43
KRCC1-201ENST00000347055 ZNF777Q9ULD5 760 aaPredicted RBP23.98■■□□□ 1.43
KRCC1-201ENST00000347055 PLEKHD1A6NEE1 506 aa23.96■■□□□ 1.43
KRCC1-201ENST00000347055 RNF17Q9BXT8 1623 aaKnown RBP23.95■■□□□ 1.43
KRCC1-201ENST00000347055 CNGB1Q14028 1251 aaPredicted RBP23.95■■□□□ 1.42
KRCC1-201ENST00000347055 NPM2Q86SE8 214 aaKnown RBP23.95■■□□□ 1.42
KRCC1-201ENST00000347055 PREX2Q70Z35 1606 aa23.95■■□□□ 1.42
KRCC1-201ENST00000347055 ATP10AO60312 1499 aa23.94■■□□□ 1.42
KRCC1-201ENST00000347055 IQGAP3Q86VI3 1631 aa23.94■■□□□ 1.42
KRCC1-201ENST00000347055 ATP10BO94823 1461 aa23.92■■□□□ 1.42
KRCC1-201ENST00000347055 ERBINQ96RT1 1412 aa23.91■■□□□ 1.42
KRCC1-201ENST00000347055 MYO5CQ9NQX4 1742 aa23.91■■□□□ 1.42
KRCC1-201ENST00000347055 A2MP01023 1474 aa23.91■■□□□ 1.42
KRCC1-201ENST00000347055 KDM2BQ8NHM5 1336 aa23.91■■□□□ 1.42
KRCC1-201ENST00000347055 CENPQQ7L2Z9 268 aaPredicted RBP23.91■■□□□ 1.42
KRCC1-201ENST00000347055 PLXNC1O60486 1568 aa23.91■■□□□ 1.42
KRCC1-201ENST00000347055 SAMD9LQ8IVG5 1584 aa23.89■■□□□ 1.42
KRCC1-201ENST00000347055 KDM2AQ9Y2K7 1162 aa23.89■■□□□ 1.42
KRCC1-201ENST00000347055 EIF3AQ14152 1382 aaKnown RBP23.87■■□□□ 1.41
KRCC1-201ENST00000347055 CRBNQ96SW2 442 aa23.87■■□□□ 1.41
KRCC1-201ENST00000347055 TESK2Q96S53 571 aa23.86■■□□□ 1.41
KRCC1-201ENST00000347055 LAS1LQ9Y4W2 734 aaKnown RBP23.86■■□□□ 1.41
KRCC1-201ENST00000347055 MAGI2Q86UL8 1455 aa23.85■■□□□ 1.41
KRCC1-201ENST00000347055 CDCA7LQ96GN5 454 aa23.85■■□□□ 1.41
KRCC1-201ENST00000347055 CDC42BPBQ9Y5S2 1711 aa23.84■■□□□ 1.41
KRCC1-201ENST00000347055 TMF1P82094 1093 aa23.84■■□□□ 1.41
KRCC1-201ENST00000347055 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.84■■□□□ 1.41
KRCC1-201ENST00000347055 PLA2R1Q13018 1463 aa23.84■■□□□ 1.41
KRCC1-201ENST00000347055 DISP3Q9P2K9 1392 aa23.83■■□□□ 1.41
KRCC1-201ENST00000347055 SYNMO15061 1565 aa23.82■■□□□ 1.4
KRCC1-201ENST00000347055 GSE1Q14687 1217 aa23.81■■□□□ 1.4
KRCC1-201ENST00000347055 FAM161AQ3B820 660 aa23.8■■□□□ 1.4
KRCC1-201ENST00000347055 JPH4Q96JJ6 628 aa23.79■■□□□ 1.4
KRCC1-201ENST00000347055 IQGAP1P46940 1657 aa23.79■■□□□ 1.4
KRCC1-201ENST00000347055 PIK3C2GO75747 1445 aa23.79■■□□□ 1.4
KRCC1-201ENST00000347055 NPC1L1Q9UHC9 1359 aa23.79■■□□□ 1.4
KRCC1-201ENST00000347055 ZNF521Q96K83 1311 aa23.78■■□□□ 1.4
KRCC1-201ENST00000347055 CHMP7Q8WUX9 453 aaPredicted RBP23.78■■□□□ 1.4
KRCC1-201ENST00000347055 VIRMAQ69YN4 1812 aaKnown RBP23.77■■□□□ 1.4
KRCC1-201ENST00000347055 IL27Q8NEV9 243 aa23.77■■□□□ 1.4
KRCC1-201ENST00000347055 PANK3Q9H999 370 aa23.77■■□□□ 1.4
KRCC1-201ENST00000347055 DAXXQ9UER7 740 aaPredicted RBP23.77■■□□□ 1.4
KRCC1-201ENST00000347055 ABCC2Q92887 1545 aa23.76■■□□□ 1.39
KRCC1-201ENST00000347055 SENP3-EIF4A1A0A087X0R7 540 aa23.76■■□□□ 1.39
KRCC1-201ENST00000347055 DUOX2Q9NRD8 1548 aa23.76■■□□□ 1.39
KRCC1-201ENST00000347055 WDR7Q9Y4E6 1490 aa23.76■■□□□ 1.39
KRCC1-201ENST00000347055 NFKBIBQ15653 356 aa23.75■■□□□ 1.39
KRCC1-201ENST00000347055 STAC3Q96MF2 364 aa23.75■■□□□ 1.39
KRCC1-201ENST00000347055 SALL2Q9Y467 1007 aaPredicted RBP23.75■■□□□ 1.39
KRCC1-201ENST00000347055 NGEFQ8N5V2 710 aa23.74■■□□□ 1.39
KRCC1-201ENST00000347055 PLIN1O60240 522 aa23.73■■□□□ 1.39
KRCC1-201ENST00000347055 NBPF1Q3BBV0 1214 aa23.73■■□□□ 1.39
KRCC1-201ENST00000347055 CDCA8Q53HL2 280 aa23.73■■□□□ 1.39
KRCC1-201ENST00000347055 CC2D1BQ5T0F9 858 aaKnown RBP23.73■■□□□ 1.39
KRCC1-201ENST00000347055 DUSP27Q5VZP5 1158 aa23.73■■□□□ 1.39
KRCC1-201ENST00000347055 NINLQ9Y2I6 1382 aa23.71■■□□□ 1.39
KRCC1-201ENST00000347055 HNRNPMP52272 730 aaKnown RBP eCLIP23.71■■□□□ 1.39
KRCC1-201ENST00000347055 MADDQ8WXG6 1647 aa23.71■■□□□ 1.39
KRCC1-201ENST00000347055 DNAJC5BQ9UF47 199 aa23.7■■□□□ 1.39
KRCC1-201ENST00000347055 ASXL1Q8IXJ9 1541 aa23.7■■□□□ 1.39
KRCC1-201ENST00000347055 SYCP2Q9BX26 1530 aa23.7■■□□□ 1.39
KRCC1-201ENST00000347055 GOLGA2Q08379 1002 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms