RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 CD109Q6YHK3 1445 aa19.79■□□□□ 0.76
CDK5RAP1-202ENST00000346416 MYT1LQ9UL68 1186 aa19.78■□□□□ 0.76
CDK5RAP1-202ENST00000346416 C11orf95C9JLR9 678 aaPredicted RBP19.77■□□□□ 0.76
CDK5RAP1-202ENST00000346416 DCAF11Q8TEB1 546 aa19.77■□□□□ 0.76
CDK5RAP1-202ENST00000346416 KDM2AQ9Y2K7 1162 aa19.76■□□□□ 0.75
CDK5RAP1-202ENST00000346416 CCDC7Q96M83 1385 aa19.75■□□□□ 0.75
CDK5RAP1-202ENST00000346416 ATP10AO60312 1499 aa19.74■□□□□ 0.75
CDK5RAP1-202ENST00000346416 RALGAPBQ86X10 1494 aa19.74■□□□□ 0.75
CDK5RAP1-202ENST00000346416 DEPDC5O75140 1603 aa19.73■□□□□ 0.75
CDK5RAP1-202ENST00000346416 ZNF518AQ6AHZ1 1483 aa19.73■□□□□ 0.75
CDK5RAP1-202ENST00000346416 USP47Q96K76 1375 aa19.73■□□□□ 0.75
CDK5RAP1-202ENST00000346416 GTF3C3Q9Y5Q9 886 aa19.73■□□□□ 0.75
CDK5RAP1-202ENST00000346416 CFAP74Q9C0B2 1584 aa19.72■□□□□ 0.75
CDK5RAP1-202ENST00000346416 DHX29Q7Z478 1369 aaKnown RBP19.72■□□□□ 0.75
CDK5RAP1-202ENST00000346416 CCER2I3L3R5 266 aa19.72■□□□□ 0.75
CDK5RAP1-202ENST00000346416 RGL3Q3MIN7 710 aa19.71■□□□□ 0.75
CDK5RAP1-202ENST00000346416 KIDINS220Q9ULH0 1771 aa19.71■□□□□ 0.75
CDK5RAP1-202ENST00000346416 CYB5RLQ6IPT4 315 aa19.7■□□□□ 0.74
CDK5RAP1-202ENST00000346416 KDM5CP41229 1560 aa19.7■□□□□ 0.74
CDK5RAP1-202ENST00000346416 KIF3BO15066 747 aa19.7■□□□□ 0.74
CDK5RAP1-202ENST00000346416 POLR1AO95602 1720 aaPredicted RBP19.69■□□□□ 0.74
CDK5RAP1-202ENST00000346416 E9PCH4 1651 aa19.69■□□□□ 0.74
CDK5RAP1-202ENST00000346416 KIF7Q2M1P5 1343 aa19.69■□□□□ 0.74
CDK5RAP1-202ENST00000346416 CARD11Q9BXL7 1154 aa19.69■□□□□ 0.74
CDK5RAP1-202ENST00000346416 CNTLNQ9NXG0 1405 aa19.69■□□□□ 0.74
CDK5RAP1-202ENST00000346416 EIF2AK4Q9P2K8 1649 aaKnown RBP19.68■□□□□ 0.74
CDK5RAP1-202ENST00000346416 POGZQ7Z3K3 1410 aa19.68■□□□□ 0.74
CDK5RAP1-202ENST00000346416 KANK1Q14678 1352 aa19.67■□□□□ 0.74
CDK5RAP1-202ENST00000346416 A2MP01023 1474 aa19.67■□□□□ 0.74
CDK5RAP1-202ENST00000346416 VWDEQ8N2E2 1590 aa19.66■□□□□ 0.74
CDK5RAP1-202ENST00000346416 PRAG1Q86YV5 1406 aa19.66■□□□□ 0.74
CDK5RAP1-202ENST00000346416 TET3O43151 1660 aa19.65■□□□□ 0.74
CDK5RAP1-202ENST00000346416 RIMBP3CA6NJZ7 1639 aa19.65■□□□□ 0.74
CDK5RAP1-202ENST00000346416 RIMBP3BA6NNM3 1639 aa19.65■□□□□ 0.74
CDK5RAP1-202ENST00000346416 RIMBP3Q9UFD9 1639 aa19.65■□□□□ 0.74
CDK5RAP1-202ENST00000346416 PRDM15P57071 1507 aaPredicted RBP19.64■□□□□ 0.73
CDK5RAP1-202ENST00000346416 BCORL1Q5H9F3 1711 aa19.64■□□□□ 0.73
CDK5RAP1-202ENST00000346416 MROH1Q8NDA8 1641 aa19.63■□□□□ 0.73
CDK5RAP1-202ENST00000346416 NEO1Q92859 1461 aa19.63■□□□□ 0.73
CDK5RAP1-202ENST00000346416 ROCK2O75116 1388 aaKnown RBP19.63■□□□□ 0.73
CDK5RAP1-202ENST00000346416 MLH3Q9UHC1 1453 aa19.63■□□□□ 0.73
CDK5RAP1-202ENST00000346416 TRPM2O94759 1503 aa19.62■□□□□ 0.73
CDK5RAP1-202ENST00000346416 PTPRTO14522 1441 aa19.62■□□□□ 0.73
CDK5RAP1-202ENST00000346416 TRPM1Q7Z4N2 1603 aa19.62■□□□□ 0.73
CDK5RAP1-202ENST00000346416 SPHKAPQ2M3C7 1700 aa19.62■□□□□ 0.73
CDK5RAP1-202ENST00000346416 HECW2Q9P2P5 1572 aa19.6■□□□□ 0.73
CDK5RAP1-202ENST00000346416 ST20-MTHFSA0A0A6YYL1 179 aa19.58■□□□□ 0.73
CDK5RAP1-202ENST00000346416 MAP3K4Q9Y6R4 1608 aa19.58■□□□□ 0.72
CDK5RAP1-202ENST00000346416 ARID4BQ4LE39 1312 aaPredicted RBP19.58■□□□□ 0.72
CDK5RAP1-202ENST00000346416 RAPGEF3O95398 923 aa19.57■□□□□ 0.72
CDK5RAP1-202ENST00000346416 NBPF1Q3BBV0 1214 aa19.57■□□□□ 0.72
CDK5RAP1-202ENST00000346416 CLTCL1P53675 1640 aa19.56■□□□□ 0.72
CDK5RAP1-202ENST00000346416 FRMPD1Q5SYB0 1578 aa19.56■□□□□ 0.72
CDK5RAP1-202ENST00000346416 GPRASP1Q5JY77 1395 aa19.56■□□□□ 0.72
CDK5RAP1-202ENST00000346416 CEP152O94986 1710 aa19.55■□□□□ 0.72
CDK5RAP1-202ENST00000346416 RNF17Q9BXT8 1623 aaKnown RBP19.55■□□□□ 0.72
CDK5RAP1-202ENST00000346416 POLR3GLQ9BT43 218 aa19.55■□□□□ 0.72
CDK5RAP1-202ENST00000346416 GLI2P10070 1586 aa19.55■□□□□ 0.72
CDK5RAP1-202ENST00000346416 ABCA6Q8N139 1617 aa19.54■□□□□ 0.72
CDK5RAP1-202ENST00000346416 EFCAB6Q5THR3 1501 aa19.54■□□□□ 0.72
CDK5RAP1-202ENST00000346416 PRKRIP1Q9H875 184 aaPredicted RBP19.53■□□□□ 0.72
CDK5RAP1-202ENST00000346416 LMTK2Q8IWU2 1503 aa19.52■□□□□ 0.72
CDK5RAP1-202ENST00000346416 PPRC1Q5VV67 1664 aaKnown RBP19.52■□□□□ 0.71
CDK5RAP1-202ENST00000346416 LAMC1P11047 1609 aa19.51■□□□□ 0.71
CDK5RAP1-202ENST00000346416 GGT6Q6P531 493 aa19.5■□□□□ 0.71
CDK5RAP1-202ENST00000346416 RICTORQ6R327 1708 aa19.5■□□□□ 0.71
CDK5RAP1-202ENST00000346416 FAM69CQ0P6D2 419 aa19.49■□□□□ 0.71
CDK5RAP1-202ENST00000346416 STAC3Q96MF2 364 aa19.48■□□□□ 0.71
CDK5RAP1-202ENST00000346416 UGGT1Q9NYU2 1555 aa19.47■□□□□ 0.71
CDK5RAP1-202ENST00000346416 MADDQ8WXG6 1647 aa19.47■□□□□ 0.71
CDK5RAP1-202ENST00000346416 DIP2BQ9P265 1576 aa19.47■□□□□ 0.71
CDK5RAP1-202ENST00000346416 DIP2CQ9Y2E4 1556 aa19.47■□□□□ 0.71
CDK5RAP1-202ENST00000346416 NEURL4Q96JN8 1562 aa19.46■□□□□ 0.71
CDK5RAP1-202ENST00000346416 CCDC184Q52MB2 194 aa19.43■□□□□ 0.7
CDK5RAP1-202ENST00000346416 WASHC2CQ9Y4E1 1318 aa19.43■□□□□ 0.7
CDK5RAP1-202ENST00000346416 NPATQ14207 1427 aa19.43■□□□□ 0.7
CDK5RAP1-202ENST00000346416 KIF1BO60333 1816 aa19.42■□□□□ 0.7
CDK5RAP1-202ENST00000346416 ABCC3O15438 1527 aa19.42■□□□□ 0.7
CDK5RAP1-202ENST00000346416 YEATS2Q9ULM3 1422 aa19.42■□□□□ 0.7
CDK5RAP1-202ENST00000346416 TESK2Q96S53 571 aa19.41■□□□□ 0.7
CDK5RAP1-202ENST00000346416 CFAP65Q6ZU64 1925 aaKnown RBP19.41■□□□□ 0.7
CDK5RAP1-202ENST00000346416 TSPOAP1O95153 1857 aa19.39■□□□□ 0.69
CDK5RAP1-202ENST00000346416 MRS2Q9HD23 443 aa19.39■□□□□ 0.69
CDK5RAP1-202ENST00000346416 COL17A1Q9UMD9 1497 aaPredicted RBP19.38■□□□□ 0.69
CDK5RAP1-202ENST00000346416 CNGB1Q14028 1251 aaPredicted RBP19.37■□□□□ 0.69
CDK5RAP1-202ENST00000346416 MROH2AA6NES4 1674 aa19.36■□□□□ 0.69
CDK5RAP1-202ENST00000346416 CAMSAP1Q5T5Y3 1602 aa19.36■□□□□ 0.69
CDK5RAP1-202ENST00000346416 DISP3Q9P2K9 1392 aa19.36■□□□□ 0.69
CDK5RAP1-202ENST00000346416 MYOM2P54296 1465 aa19.36■□□□□ 0.69
CDK5RAP1-202ENST00000346416 IQGAP1P46940 1657 aa19.36■□□□□ 0.69
CDK5RAP1-202ENST00000346416 ZMYM4Q5VZL5 1548 aa19.35■□□□□ 0.69
CDK5RAP1-202ENST00000346416 HNRNPUQ00839 825 aaKnown RBP eCLIP19.35■□□□□ 0.69
CDK5RAP1-202ENST00000346416 ADGRB3O60242 1522 aa19.34■□□□□ 0.69
CDK5RAP1-202ENST00000346416 IFT172Q9UG01 1749 aa19.34■□□□□ 0.69
CDK5RAP1-202ENST00000346416 KIAA1210Q9ULL0 1709 aa19.34■□□□□ 0.69
CDK5RAP1-202ENST00000346416 TMF1P82094 1093 aa19.34■□□□□ 0.69
CDK5RAP1-202ENST00000346416 ADGRF5Q8IZF2 1346 aa19.34■□□□□ 0.69
CDK5RAP1-202ENST00000346416 SCAF11Q99590 1463 aaKnown RBP19.34■□□□□ 0.69
CDK5RAP1-202ENST00000346416 CHGAP10645 457 aaKnown RBP19.33■□□□□ 0.69
CDK5RAP1-202ENST00000346416 PELP1Q8IZL8 1130 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms