RNA–Protein interactions for RNA: ENST00000345523.9

C19orf48-201, Transcript of chromosome 19 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C19orf48, Length 1,503 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-201ENST00000345523 KDM5CP41229 1560 aa21.93■■□□□ 1.1
C19orf48-201ENST00000345523 MYO5CQ9NQX4 1742 aa21.93■■□□□ 1.1
C19orf48-201ENST00000345523 ATP10AO60312 1499 aa21.92■■□□□ 1.1
C19orf48-201ENST00000345523 SYCP2Q9BX26 1530 aa21.91■■□□□ 1.1
C19orf48-201ENST00000345523 CCDC144AA2RUR9 1427 aa21.91■■□□□ 1.1
C19orf48-201ENST00000345523 TTC37Q6PGP7 1564 aa21.9■■□□□ 1.1
C19orf48-201ENST00000345523 NPM1P06748 294 aaKnown RBP eCLIP21.89■■□□□ 1.09
C19orf48-201ENST00000345523 CARD11Q9BXL7 1154 aa21.89■■□□□ 1.09
C19orf48-201ENST00000345523 STAC3Q96MF2 364 aa21.88■■□□□ 1.09
C19orf48-201ENST00000345523 MRS2Q9HD23 443 aa21.88■■□□□ 1.09
C19orf48-201ENST00000345523 WDR7Q9Y4E6 1490 aa21.88■■□□□ 1.09
C19orf48-201ENST00000345523 RTEL1-TNFRSF6BF6WH68 1400 aa21.87■■□□□ 1.09
C19orf48-201ENST00000345523 MAGI2Q86UL8 1455 aa21.87■■□□□ 1.09
C19orf48-201ENST00000345523 ZBED9Q6R2W3 1325 aa21.87■■□□□ 1.09
C19orf48-201ENST00000345523 IQGAP3Q86VI3 1631 aa21.86■■□□□ 1.09
C19orf48-201ENST00000345523 CYB5RLQ6IPT4 315 aa21.85■■□□□ 1.09
C19orf48-201ENST00000345523 DHX29Q7Z478 1369 aaKnown RBP21.83■■□□□ 1.09
C19orf48-201ENST00000345523 GPRASP1Q5JY77 1395 aa21.82■■□□□ 1.08
C19orf48-201ENST00000345523 ZNF326Q5BKZ1 582 aaKnown RBP21.82■■□□□ 1.08
C19orf48-201ENST00000345523 ASXL2Q76L83 1435 aa21.82■■□□□ 1.08
C19orf48-201ENST00000345523 DCAF11Q8TEB1 546 aa21.81■■□□□ 1.08
C19orf48-201ENST00000345523 LAMC1P11047 1609 aa21.81■■□□□ 1.08
C19orf48-201ENST00000345523 EIF2AK4Q9P2K8 1649 aaKnown RBP21.8■■□□□ 1.08
C19orf48-201ENST00000345523 PRAG1Q86YV5 1406 aa21.8■■□□□ 1.08
C19orf48-201ENST00000345523 ABCC1P33527 1531 aa21.8■■□□□ 1.08
C19orf48-201ENST00000345523 RALBP1Q15311 655 aa21.78■■□□□ 1.08
C19orf48-201ENST00000345523 WASHC2CQ9Y4E1 1318 aa21.77■■□□□ 1.08
C19orf48-201ENST00000345523 ABCA9Q8IUA7 1624 aa21.77■■□□□ 1.07
C19orf48-201ENST00000345523 BCORL1Q5H9F3 1711 aa21.75■■□□□ 1.07
C19orf48-201ENST00000345523 TSHZ2Q9NRE2 1034 aa21.73■■□□□ 1.07
C19orf48-201ENST00000345523 PLA2R1Q13018 1463 aa21.72■■□□□ 1.07
C19orf48-201ENST00000345523 FAM9BQ8IZU0 186 aa21.72■■□□□ 1.07
C19orf48-201ENST00000345523 BRD4O60885 1362 aaPredicted RBP21.72■■□□□ 1.07
C19orf48-201ENST00000345523 TRPM1Q7Z4N2 1603 aa21.71■■□□□ 1.07
C19orf48-201ENST00000345523 ST20-MTHFSA0A0A6YYL1 179 aa21.71■■□□□ 1.07
C19orf48-201ENST00000345523 KDM2AQ9Y2K7 1162 aa21.71■■□□□ 1.07
C19orf48-201ENST00000345523 SPAG9O60271 1321 aaKnown RBP21.71■■□□□ 1.07
C19orf48-201ENST00000345523 A2MP01023 1474 aa21.68■■□□□ 1.06
C19orf48-201ENST00000345523 MYBBP1AQ9BQG0 1328 aaKnown RBP21.67■■□□□ 1.06
C19orf48-201ENST00000345523 SLC24A1O60721 1099 aa21.67■■□□□ 1.06
C19orf48-201ENST00000345523 CCDC184Q52MB2 194 aa21.67■■□□□ 1.06
C19orf48-201ENST00000345523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.67■■□□□ 1.06not detected■□□□□ 9.6
C19orf48-201ENST00000345523 KANK1Q14678 1352 aa21.67■■□□□ 1.06
C19orf48-201ENST00000345523 INSRP06213 1382 aa21.66■■□□□ 1.06
C19orf48-201ENST00000345523 PRDM15P57071 1507 aaPredicted RBP21.66■■□□□ 1.06
C19orf48-201ENST00000345523 NEURL4Q96JN8 1562 aa21.65■■□□□ 1.06
C19orf48-201ENST00000345523 SMG6Q86US8 1419 aaKnown RBP21.65■■□□□ 1.06
C19orf48-201ENST00000345523 TRAPPC8Q9Y2L5 1435 aa21.65■■□□□ 1.06
C19orf48-201ENST00000345523 TMC1Q8TDI8 760 aa21.65■■□□□ 1.06
C19orf48-201ENST00000345523 BCANQ96GW7 911 aa21.65■■□□□ 1.06
C19orf48-201ENST00000345523 PPP4R2Q9NY27 417 aa21.64■■□□□ 1.05
C19orf48-201ENST00000345523 POLR3GLQ9BT43 218 aa21.63■■□□□ 1.05
C19orf48-201ENST00000345523 ZFYVE16Q7Z3T8 1539 aa21.63■■□□□ 1.05
C19orf48-201ENST00000345523 PTPRTO14522 1441 aa21.63■■□□□ 1.05
C19orf48-201ENST00000345523 GLI2P10070 1586 aa21.62■■□□□ 1.05
C19orf48-201ENST00000345523 TRPM2O94759 1503 aa21.61■■□□□ 1.05
C19orf48-201ENST00000345523 E9PCH4 1651 aa21.61■■□□□ 1.05
C19orf48-201ENST00000345523 PNISRQ8TF01 805 aaKnown RBP21.61■■□□□ 1.05
C19orf48-201ENST00000345523 CFAP74Q9C0B2 1584 aa21.61■■□□□ 1.05
C19orf48-201ENST00000345523 COL17A1Q9UMD9 1497 aaPredicted RBP21.6■■□□□ 1.05
C19orf48-201ENST00000345523 ZMYM4Q5VZL5 1548 aa21.6■■□□□ 1.05
C19orf48-201ENST00000345523 TMF1P82094 1093 aa21.6■■□□□ 1.05
C19orf48-201ENST00000345523 CDCA8Q53HL2 280 aa21.6■■□□□ 1.05
C19orf48-201ENST00000345523 DEPDC5O75140 1603 aa21.6■■□□□ 1.05
C19orf48-201ENST00000345523 LRPPRCP42704 1394 aaKnown RBP21.59■■□□□ 1.05
C19orf48-201ENST00000345523 FANCAO15360 1455 aa21.59■■□□□ 1.05
C19orf48-201ENST00000345523 DIP2BQ9P265 1576 aa21.58■■□□□ 1.05
C19orf48-201ENST00000345523 MAP3K4Q9Y6R4 1608 aa21.58■■□□□ 1.05
C19orf48-201ENST00000345523 RGL3Q3MIN7 710 aa21.58■■□□□ 1.04
C19orf48-201ENST00000345523 NLRP13Q86W25 1043 aa21.58■■□□□ 1.04
C19orf48-201ENST00000345523 SCAPERQ9BY12 1400 aa21.57■■□□□ 1.04
C19orf48-201ENST00000345523 NUDCQ9Y266 331 aa21.57■■□□□ 1.04
C19orf48-201ENST00000345523 ATP7AQ04656 1500 aa21.56■■□□□ 1.04
C19orf48-201ENST00000345523 PARD3Q8TEW0 1356 aa21.56■■□□□ 1.04
C19orf48-201ENST00000345523 CD109Q6YHK3 1445 aa21.56■■□□□ 1.04
C19orf48-201ENST00000345523 INO80Q9ULG1 1556 aaPredicted RBP21.56■■□□□ 1.04
C19orf48-201ENST00000345523 VWDEQ8N2E2 1590 aa21.55■■□□□ 1.04
C19orf48-201ENST00000345523 TET3O43151 1660 aa21.54■■□□□ 1.04
C19orf48-201ENST00000345523 PDE3BQ13370 1112 aa21.54■■□□□ 1.04
C19orf48-201ENST00000345523 RNF17Q9BXT8 1623 aaKnown RBP21.54■■□□□ 1.04
C19orf48-201ENST00000345523 TESK2Q96S53 571 aa21.52■■□□□ 1.04
C19orf48-201ENST00000345523 ADGRL1O94910 1474 aa21.51■■□□□ 1.03
C19orf48-201ENST00000345523 EIF3AQ14152 1382 aaKnown RBP21.51■■□□□ 1.03
C19orf48-201ENST00000345523 RNF123Q5XPI4 1314 aa21.5■■□□□ 1.03
C19orf48-201ENST00000345523 NBPF1Q3BBV0 1214 aa21.5■■□□□ 1.03
C19orf48-201ENST00000345523 PER1O15534 1290 aaPredicted RBP21.5■■□□□ 1.03
C19orf48-201ENST00000345523 AFAP1Q8N556 730 aa21.5■■□□□ 1.03
C19orf48-201ENST00000345523 KIF13AQ9H1H9 1805 aa21.49■■□□□ 1.03
C19orf48-201ENST00000345523 SCAF11Q99590 1463 aaKnown RBP21.47■■□□□ 1.03
C19orf48-201ENST00000345523 NEO1Q92859 1461 aa21.46■■□□□ 1.03
C19orf48-201ENST00000345523 CEP152O94986 1710 aa21.46■■□□□ 1.03
C19orf48-201ENST00000345523 SPHKAPQ2M3C7 1700 aa21.46■■□□□ 1.03
C19orf48-201ENST00000345523 LMTK2Q8IWU2 1503 aa21.46■■□□□ 1.03
C19orf48-201ENST00000345523 MADDQ8WXG6 1647 aa21.46■■□□□ 1.03
C19orf48-201ENST00000345523 ZNF518AQ6AHZ1 1483 aa21.46■■□□□ 1.03
C19orf48-201ENST00000345523 KIAA1210Q9ULL0 1709 aa21.45■■□□□ 1.02
C19orf48-201ENST00000345523 FAM69CQ0P6D2 419 aa21.44■■□□□ 1.02
C19orf48-201ENST00000345523 MYOM2P54296 1465 aa21.44■■□□□ 1.02
C19orf48-201ENST00000345523 TSPOAP1O95153 1857 aa21.42■■□□□ 1.02
C19orf48-201ENST00000345523 DISP3Q9P2K9 1392 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms