RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 PRKRIP1Q9H875 184 aaPredicted RBP11.6□□□□□ -0.55
SKAP2-201ENST00000345317 TSHZ2Q9NRE2 1034 aa11.6□□□□□ -0.55
SKAP2-201ENST00000345317 CCDC141Q6ZP82 1450 aa11.59□□□□□ -0.55
SKAP2-201ENST00000345317 PLEKHH2Q8IVE3 1493 aa11.59□□□□□ -0.55
SKAP2-201ENST00000345317 CFAP70Q5T0N1 1121 aa11.59□□□□□ -0.55
SKAP2-201ENST00000345317 PANK3Q9H999 370 aa11.59□□□□□ -0.55
SKAP2-201ENST00000345317 CCDC184Q52MB2 194 aa11.58□□□□□ -0.56
SKAP2-201ENST00000345317 NUTM2FA1L443 756 aa11.58□□□□□ -0.56
SKAP2-201ENST00000345317 CDCA8Q53HL2 280 aa11.58□□□□□ -0.56
SKAP2-201ENST00000345317 CCDC7Q96M83 1385 aa11.57□□□□□ -0.56
SKAP2-201ENST00000345317 CANXP27824 592 aaKnown RBP11.57□□□□□ -0.56
SKAP2-201ENST00000345317 SOX12O15370 315 aa11.57□□□□□ -0.56
SKAP2-201ENST00000345317 CD109Q6YHK3 1445 aa11.56□□□□□ -0.56
SKAP2-201ENST00000345317 ERCC6L2Q5T890 1561 aa11.56□□□□□ -0.56
SKAP2-201ENST00000345317 C14orf37Q86TY3 774 aa11.54□□□□□ -0.56
SKAP2-201ENST00000345317 SYCP2Q9BX26 1530 aa11.54□□□□□ -0.56
SKAP2-201ENST00000345317 TRAPPC8Q9Y2L5 1435 aa11.54□□□□□ -0.56
SKAP2-201ENST00000345317 ASXL2Q76L83 1435 aa11.53□□□□□ -0.56
SKAP2-201ENST00000345317 ADGRL1O94910 1474 aa11.53□□□□□ -0.56
SKAP2-201ENST00000345317 ZBTB7CA1YPR0 619 aa11.53□□□□□ -0.56
SKAP2-201ENST00000345317 FANCAO15360 1455 aa11.53□□□□□ -0.56
SKAP2-201ENST00000345317 TCOF1Q13428 1488 aaKnown RBP11.52□□□□□ -0.56
SKAP2-201ENST00000345317 NEFMP07197 916 aa11.51□□□□□ -0.57
SKAP2-201ENST00000345317 KTN1Q86UP2 1357 aaKnown RBP11.51□□□□□ -0.57
SKAP2-201ENST00000345317 MINK1Q8N4C8 1332 aaPredicted RBP11.5□□□□□ -0.57
SKAP2-201ENST00000345317 CCDC136Q96JN2 1154 aa11.5□□□□□ -0.57
SKAP2-201ENST00000345317 PLCH2O75038 1416 aa11.5□□□□□ -0.57
SKAP2-201ENST00000345317 U2SURPO15042 1029 aaKnown RBP11.5□□□□□ -0.57
SKAP2-201ENST00000345317 MORC1Q86VD1 984 aa11.5□□□□□ -0.57
SKAP2-201ENST00000345317 CCDC146Q8IYE0 955 aa11.49□□□□□ -0.57
SKAP2-201ENST00000345317 CHD1O14646 1710 aa11.49□□□□□ -0.57
SKAP2-201ENST00000345317 KDM6BO15054 1643 aa11.49□□□□□ -0.57
SKAP2-201ENST00000345317 B4GALNT3Q6L9W6 998 aa11.49□□□□□ -0.57
SKAP2-201ENST00000345317 RPRD2Q5VT52 1461 aaKnown RBP11.48□□□□□ -0.57
SKAP2-201ENST00000345317 FBXO31Q5XUX0 539 aaPredicted RBP11.48□□□□□ -0.57
SKAP2-201ENST00000345317 ABCC2Q92887 1545 aa11.47□□□□□ -0.57
SKAP2-201ENST00000345317 VGFO15240 615 aaPredicted RBP11.47□□□□□ -0.57
SKAP2-201ENST00000345317 LMOD2Q6P5Q4 547 aa11.46□□□□□ -0.58
SKAP2-201ENST00000345317 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.46□□□□□ -0.58
SKAP2-201ENST00000345317 CNTLNQ9NXG0 1405 aa11.46□□□□□ -0.58
SKAP2-201ENST00000345317 RALBP1Q15311 655 aa11.45□□□□□ -0.58
SKAP2-201ENST00000345317 WDR7Q9Y4E6 1490 aa11.45□□□□□ -0.58
SKAP2-201ENST00000345317 NLRP13Q86W25 1043 aa11.45□□□□□ -0.58
SKAP2-201ENST00000345317 ADGRF5Q8IZF2 1346 aa11.44□□□□□ -0.58
SKAP2-201ENST00000345317 CABP2Q9NPB3 220 aa11.44□□□□□ -0.58
SKAP2-201ENST00000345317 ABCA8O94911 1581 aa11.44□□□□□ -0.58
SKAP2-201ENST00000345317 NPM2Q86SE8 214 aaKnown RBP11.43□□□□□ -0.58
SKAP2-201ENST00000345317 ITSN2Q9NZM3 1697 aa11.43□□□□□ -0.58
SKAP2-201ENST00000345317 CFAP53Q96M91 514 aa11.43□□□□□ -0.58
SKAP2-201ENST00000345317 PZPP20742 1482 aa11.43□□□□□ -0.58
SKAP2-201ENST00000345317 LAS1LQ9Y4W2 734 aaKnown RBP11.43□□□□□ -0.58
SKAP2-201ENST00000345317 DNMT1P26358 1616 aaKnown RBP11.43□□□□□ -0.58
SKAP2-201ENST00000345317 EIF3AQ14152 1382 aaKnown RBP11.42□□□□□ -0.58
SKAP2-201ENST00000345317 MYBBP1AQ9BQG0 1328 aaKnown RBP11.42□□□□□ -0.58
SKAP2-201ENST00000345317 CENPJQ9HC77 1338 aaPredicted RBP11.42□□□□□ -0.58
SKAP2-201ENST00000345317 ERBINQ96RT1 1412 aa11.42□□□□□ -0.58
SKAP2-201ENST00000345317 SLC12A5Q9H2X9 1139 aa11.42□□□□□ -0.58
SKAP2-201ENST00000345317 RRP7AQ9Y3A4 280 aaKnown RBP11.42□□□□□ -0.58
SKAP2-201ENST00000345317 ABCC10Q5T3U5 1492 aa11.41□□□□□ -0.58
SKAP2-201ENST00000345317 LRRIQ1Q96JM4 1722 aa11.41□□□□□ -0.58
SKAP2-201ENST00000345317 IDI1Q13907 227 aa11.41□□□□□ -0.58
SKAP2-201ENST00000345317 U2AF1L5P0DN76 240 aaPredicted RBP11.41□□□□□ -0.58
SKAP2-201ENST00000345317 CEBPAP49715 358 aaPredicted RBP11.41□□□□□ -0.58
SKAP2-201ENST00000345317 U2AF1Q01081 240 aaKnown RBP eCLIP11.41□□□□□ -0.58
SKAP2-201ENST00000345317 RTL5Q5HYW3 569 aaPredicted RBP11.4□□□□□ -0.58
SKAP2-201ENST00000345317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.4□□□□□ -0.58
SKAP2-201ENST00000345317 RBM19Q9Y4C8 960 aaKnown RBP11.4□□□□□ -0.58
SKAP2-201ENST00000345317 DHX29Q7Z478 1369 aaKnown RBP11.39□□□□□ -0.59
SKAP2-201ENST00000345317 FRAT1Q92837 279 aaPredicted RBP11.39□□□□□ -0.59
SKAP2-201ENST00000345317 HDGFP51858 240 aaKnown RBP11.39□□□□□ -0.59
SKAP2-201ENST00000345317 MBD5Q9P267 1494 aa11.38□□□□□ -0.59
SKAP2-201ENST00000345317 FAM135AQ9P2D6 1515 aa11.38□□□□□ -0.59
SKAP2-201ENST00000345317 HDGFL2Q7Z4V5 671 aaPredicted RBP11.37□□□□□ -0.59
SKAP2-201ENST00000345317 PRAM1Q96QH2 718 aa11.37□□□□□ -0.59
SKAP2-201ENST00000345317 PAK3O75914 559 aaPredicted RBP11.37□□□□□ -0.59
SKAP2-201ENST00000345317 GGNBP2Q9H3C7 697 aa11.37□□□□□ -0.59
SKAP2-201ENST00000345317 TTC37Q6PGP7 1564 aa11.37□□□□□ -0.59
SKAP2-201ENST00000345317 TXNDC2Q86VQ3 553 aa11.36□□□□□ -0.59
SKAP2-201ENST00000345317 SLC26A8Q96RN1 970 aa11.36□□□□□ -0.59
SKAP2-201ENST00000345317 DENND4BO75064 1496 aaPredicted RBP11.36□□□□□ -0.59
SKAP2-201ENST00000345317 PLIN1O60240 522 aa11.36□□□□□ -0.59
SKAP2-201ENST00000345317 MAPK8IP3Q9UPT6 1336 aa11.36□□□□□ -0.59
SKAP2-201ENST00000345317 DAXXQ9UER7 740 aaPredicted RBP11.35□□□□□ -0.59
SKAP2-201ENST00000345317 EID1Q9Y6B2 187 aa11.35□□□□□ -0.59
SKAP2-201ENST00000345317 EVC2Q86UK5 1308 aa11.35□□□□□ -0.59
SKAP2-201ENST00000345317 KDM5BQ9UGL1 1544 aa11.35□□□□□ -0.59
SKAP2-201ENST00000345317 NUDCQ9Y266 331 aa11.35□□□□□ -0.59
SKAP2-201ENST00000345317 NBR1Q14596 966 aa11.35□□□□□ -0.59
SKAP2-201ENST00000345317 CFAP65Q6ZU64 1925 aaKnown RBP11.34□□□□□ -0.59
SKAP2-201ENST00000345317 APAF1O14727 1248 aa11.34□□□□□ -0.59
SKAP2-201ENST00000345317 EIF5BO60841 1220 aaKnown RBP11.34□□□□□ -0.59
SKAP2-201ENST00000345317 DEKP35659 375 aaKnown RBP11.34□□□□□ -0.59
SKAP2-201ENST00000345317 ADAMTS8Q9UP79 889 aa11.34□□□□□ -0.59
SKAP2-201ENST00000345317 CDCA7LQ96GN5 454 aa11.34□□□□□ -0.59
SKAP2-201ENST00000345317 WAPLQ7Z5K2 1190 aa11.33□□□□□ -0.6
SKAP2-201ENST00000345317 TERF2IPQ9NYB0 399 aa11.33□□□□□ -0.6
SKAP2-201ENST00000345317 SAMD9LQ8IVG5 1584 aa11.33□□□□□ -0.6
SKAP2-201ENST00000345317 RCAN3Q9UKA8 241 aa11.33□□□□□ -0.6
SKAP2-201ENST00000345317 DISP3Q9P2K9 1392 aa11.33□□□□□ -0.6
SKAP2-201ENST00000345317 ARHGEF12Q9NZN5 1544 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms