RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 NOM1Q5C9Z4 860 aaKnown RBP9.62□□□□□ -0.87
LIN28B-201ENST00000345080 SYAP1Q96A49 352 aaPredicted RBP9.62□□□□□ -0.87
LIN28B-201ENST00000345080 HSP90AB1P08238 724 aaKnown RBP9.61□□□□□ -0.87
LIN28B-201ENST00000345080 ZBED9Q6R2W3 1325 aa9.61□□□□□ -0.87
LIN28B-201ENST00000345080 E9PSI1 815 aa9.61□□□□□ -0.87
LIN28B-201ENST00000345080 NCBP3Q53F19 620 aaKnown RBP9.61□□□□□ -0.87
LIN28B-201ENST00000345080 CHMP4AQ9BY43 222 aa9.61□□□□□ -0.87
LIN28B-201ENST00000345080 PLCD4Q9BRC7 762 aa9.6□□□□□ -0.87
LIN28B-201ENST00000345080 PPP1R1BQ9UD71 204 aaPredicted RBP9.6□□□□□ -0.87
LIN28B-201ENST00000345080 RALBP1Q15311 655 aa9.6□□□□□ -0.87
LIN28B-201ENST00000345080 HIRIP3Q9BW71 556 aaPredicted RBP9.6□□□□□ -0.87
LIN28B-201ENST00000345080 SLKQ9H2G2 1235 aaPredicted RBP9.6□□□□□ -0.87
LIN28B-201ENST00000345080 TAOK2Q9UL54 1235 aa9.6□□□□□ -0.87
LIN28B-201ENST00000345080 CUX1P39880 1505 aa9.6□□□□□ -0.87
LIN28B-201ENST00000345080 SRPK2P78362 688 aaKnown RBP9.6□□□□□ -0.87
LIN28B-201ENST00000345080 NEFHP12036 1026 aa9.6□□□□□ -0.87
LIN28B-201ENST00000345080 SIN3AQ96ST3 1273 aa9.6□□□□□ -0.87
LIN28B-201ENST00000345080 PLCD3Q8N3E9 789 aa9.6□□□□□ -0.87
LIN28B-201ENST00000345080 CC2D2AQ9P2K1 1620 aa9.59□□□□□ -0.87
LIN28B-201ENST00000345080 CFAP53Q96M91 514 aa9.59□□□□□ -0.87
LIN28B-201ENST00000345080 FAM161AQ3B820 660 aa9.59□□□□□ -0.87
LIN28B-201ENST00000345080 JPH4Q96JJ6 628 aa9.59□□□□□ -0.87
LIN28B-201ENST00000345080 HMGN5P82970 282 aaKnown RBP9.58□□□□□ -0.88
LIN28B-201ENST00000345080 TNNT1P13805 278 aa9.58□□□□□ -0.88
LIN28B-201ENST00000345080 CHMP4BQ9H444 224 aaKnown RBP9.58□□□□□ -0.88
LIN28B-201ENST00000345080 RBM10P98175 930 aaKnown RBP9.57□□□□□ -0.88
LIN28B-201ENST00000345080 TEX35Q5T0J7 233 aa9.57□□□□□ -0.88
LIN28B-201ENST00000345080 KLHL34Q8N239 644 aa9.57□□□□□ -0.88
LIN28B-201ENST00000345080 WASHC2CQ9Y4E1 1318 aa9.57□□□□□ -0.88
LIN28B-201ENST00000345080 CCDC173Q0VFZ6 552 aa9.57□□□□□ -0.88
LIN28B-201ENST00000345080 HSPA5P11021 654 aaKnown RBP9.57□□□□□ -0.88
LIN28B-201ENST00000345080 PHF14O94880 888 aa9.57□□□□□ -0.88
LIN28B-201ENST00000345080 KANK4Q5T7N3 995 aaPredicted RBP9.57□□□□□ -0.88
LIN28B-201ENST00000345080 CHIC2Q9UKJ5 165 aa9.57□□□□□ -0.88
LIN28B-201ENST00000345080 HTATSF1O43719 755 aaKnown RBP9.56□□□□□ -0.88
LIN28B-201ENST00000345080 CWC15Q9P013 229 aaKnown RBP9.56□□□□□ -0.88
LIN28B-201ENST00000345080 ATAD2BQ9ULI0 1458 aa9.56□□□□□ -0.88
LIN28B-201ENST00000345080 CASC1Q6TDU7 716 aa9.56□□□□□ -0.88
LIN28B-201ENST00000345080 SPAG9O60271 1321 aaKnown RBP9.56□□□□□ -0.88
LIN28B-201ENST00000345080 RRP7BPQ9NSQ0 103 aa9.56□□□□□ -0.88
LIN28B-201ENST00000345080 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.55□□□□□ -0.88
LIN28B-201ENST00000345080 BCL11BQ9C0K0 894 aaPredicted RBP9.55□□□□□ -0.88
LIN28B-201ENST00000345080 PAK3O75914 559 aaPredicted RBP9.55□□□□□ -0.88
LIN28B-201ENST00000345080 MAP3K1Q13233 1512 aa9.55□□□□□ -0.88
LIN28B-201ENST00000345080 KTN1Q86UP2 1357 aaKnown RBP9.55□□□□□ -0.88
LIN28B-201ENST00000345080 CENPQQ7L2Z9 268 aaPredicted RBP9.55□□□□□ -0.88
LIN28B-201ENST00000345080 SMAP1Q8IYB5 467 aaPredicted RBP9.54□□□□□ -0.88
LIN28B-201ENST00000345080 GPS2Q13227 327 aa9.54□□□□□ -0.88
LIN28B-201ENST00000345080 TDRD9Q8NDG6 1382 aaKnown RBP9.54□□□□□ -0.88
LIN28B-201ENST00000345080 CARD11Q9BXL7 1154 aa9.54□□□□□ -0.88
LIN28B-201ENST00000345080 DIAPH3Q9NSV4 1193 aa9.53□□□□□ -0.88
LIN28B-201ENST00000345080 CCDC39Q9UFE4 941 aa9.53□□□□□ -0.88
LIN28B-201ENST00000345080 LETM1O95202 739 aaPredicted RBP9.53□□□□□ -0.88
LIN28B-201ENST00000345080 KIF3AQ9Y496 699 aa9.53□□□□□ -0.88
LIN28B-201ENST00000345080 GOLGA6L4A6NEF3 574 aa9.53□□□□□ -0.88
LIN28B-201ENST00000345080 CLCN1P35523 988 aa9.53□□□□□ -0.88
LIN28B-201ENST00000345080 HOMEZQ8IX15 550 aa9.53□□□□□ -0.88
LIN28B-201ENST00000345080 CCDC18Q5T9S5 1454 aa9.53□□□□□ -0.88
LIN28B-201ENST00000345080 UACAQ9BZF9 1416 aa9.52□□□□□ -0.88
LIN28B-201ENST00000345080 PSME1Q06323 249 aa9.52□□□□□ -0.88
LIN28B-201ENST00000345080 RCAN3Q9UKA8 241 aa9.52□□□□□ -0.88
LIN28B-201ENST00000345080 MAPK8IP3Q9UPT6 1336 aa9.52□□□□□ -0.89
LIN28B-201ENST00000345080 TOM1O60784 492 aa9.52□□□□□ -0.89
LIN28B-201ENST00000345080 RRP12Q5JTH9 1297 aaKnown RBP9.52□□□□□ -0.89
LIN28B-201ENST00000345080 GTPBP4Q9BZE4 634 aaKnown RBP9.52□□□□□ -0.89
LIN28B-201ENST00000345080 PIP4K2BP78356 416 aa9.52□□□□□ -0.89
LIN28B-201ENST00000345080 GPATCH11Q8N954 259 aa9.52□□□□□ -0.89
LIN28B-201ENST00000345080 TPM3P06753 285 aa9.52□□□□□ -0.89
LIN28B-201ENST00000345080 HMGB1P09429 215 aaKnown RBP9.52□□□□□ -0.89
LIN28B-201ENST00000345080 RDXP35241 583 aaKnown RBP9.52□□□□□ -0.89
LIN28B-201ENST00000345080 PDCL2Q8N4E4 241 aa9.52□□□□□ -0.89
LIN28B-201ENST00000345080 AXDND1Q5T1B0 1012 aaPredicted RBP9.51□□□□□ -0.89
LIN28B-201ENST00000345080 EFCAB5A4FU69 1503 aa9.51□□□□□ -0.89
LIN28B-201ENST00000345080 HDGFL2Q7Z4V5 671 aaPredicted RBP9.51□□□□□ -0.89
LIN28B-201ENST00000345080 KRI1Q8N9T8 703 aaKnown RBP9.51□□□□□ -0.89
LIN28B-201ENST00000345080 CHMP5Q9NZZ3 219 aa9.51□□□□□ -0.89
LIN28B-201ENST00000345080 RUSC2Q8N2Y8 1516 aa9.51□□□□□ -0.89
LIN28B-201ENST00000345080 DNAJC2Q99543 621 aaKnown RBP9.51□□□□□ -0.89
LIN28B-201ENST00000345080 KNSTRNQ9Y448 316 aa9.51□□□□□ -0.89
LIN28B-201ENST00000345080 KIF15Q9NS87 1388 aa9.51□□□□□ -0.89
LIN28B-201ENST00000345080 CCAR2Q8N163 923 aaKnown RBP9.5□□□□□ -0.89
LIN28B-201ENST00000345080 DHX37Q8IY37 1157 aaKnown RBP9.5□□□□□ -0.89
LIN28B-201ENST00000345080 TOP2BQ02880 1626 aa9.5□□□□□ -0.89
LIN28B-201ENST00000345080 LRRC9Q6ZRR7 1453 aa9.5□□□□□ -0.89
LIN28B-201ENST00000345080 ESPNB1AK53 854 aa9.5□□□□□ -0.89
LIN28B-201ENST00000345080 IRX3P78415 501 aaPredicted RBP9.5□□□□□ -0.89
LIN28B-201ENST00000345080 CC2D1BQ5T0F9 858 aaKnown RBP9.5□□□□□ -0.89
LIN28B-201ENST00000345080 THEMISQ8N1K5 641 aaPredicted RBP9.5□□□□□ -0.89
LIN28B-201ENST00000345080 WWC1Q8IX03 1113 aa9.5□□□□□ -0.89
LIN28B-201ENST00000345080 CNTLNQ9NXG0 1405 aa9.5□□□□□ -0.89
LIN28B-201ENST00000345080 H0YHG0 523 aa9.49□□□□□ -0.89
LIN28B-201ENST00000345080 FGD1P98174 961 aa9.49□□□□□ -0.89
LIN28B-201ENST00000345080 GRIN2BQ13224 1484 aa9.49□□□□□ -0.89
LIN28B-201ENST00000345080 FYCO1Q9BQS8 1478 aa9.49□□□□□ -0.89
LIN28B-201ENST00000345080 NCAPD3P42695 1498 aa9.49□□□□□ -0.89
LIN28B-201ENST00000345080 TEX14Q8IWB6 1497 aa9.49□□□□□ -0.89
LIN28B-201ENST00000345080 NGEFQ8N5V2 710 aa9.49□□□□□ -0.89
LIN28B-201ENST00000345080 TMF1P82094 1093 aa9.48□□□□□ -0.89
LIN28B-201ENST00000345080 KIAA1211Q6ZU35 1233 aa9.48□□□□□ -0.89
LIN28B-201ENST00000345080 IPO4Q8TEX9 1081 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms