RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 SAMD1Q6SPF0 538 aaPredicted RBP17.91■□□□□ 0.46
SNCA-202ENST00000345009 DHX29Q7Z478 1369 aaKnown RBP17.91■□□□□ 0.46
SNCA-202ENST00000345009 A2MP01023 1474 aa17.9■□□□□ 0.46
SNCA-202ENST00000345009 RRP7BPQ9NSQ0 103 aa17.9■□□□□ 0.46
SNCA-202ENST00000345009 DIP2CQ9Y2E4 1556 aa17.9■□□□□ 0.46
SNCA-202ENST00000345009 MAST1Q9Y2H9 1570 aa17.9■□□□□ 0.46
SNCA-202ENST00000345009 REREQ9P2R6 1566 aa17.88■□□□□ 0.45
SNCA-202ENST00000345009 ABCA6Q8N139 1617 aa17.88■□□□□ 0.45
SNCA-202ENST00000345009 MLECQ14165 292 aa17.88■□□□□ 0.45
SNCA-202ENST00000345009 ESF1Q9H501 851 aaKnown RBP17.88■□□□□ 0.45
SNCA-202ENST00000345009 SPINK5Q9NQ38 1064 aaPredicted RBP17.88■□□□□ 0.45
SNCA-202ENST00000345009 KIF15Q9NS87 1388 aa17.87■□□□□ 0.45
SNCA-202ENST00000345009 NCOA1Q15788 1441 aa17.86■□□□□ 0.45
SNCA-202ENST00000345009 ADGBQ8N7X0 1667 aa17.86■□□□□ 0.45
SNCA-202ENST00000345009 KIF3BO15066 747 aa17.85■□□□□ 0.45
SNCA-202ENST00000345009 AGLP35573 1532 aa17.85■□□□□ 0.45
SNCA-202ENST00000345009 ROCK1Q13464 1354 aa17.84■□□□□ 0.45
SNCA-202ENST00000345009 CROCC2H7BZ55 1655 aa17.83■□□□□ 0.45
SNCA-202ENST00000345009 GGT6Q6P531 493 aa17.83■□□□□ 0.44
SNCA-202ENST00000345009 PLXNC1O60486 1568 aa17.83■□□□□ 0.44
SNCA-202ENST00000345009 DUOX2Q9NRD8 1548 aa17.82■□□□□ 0.44
SNCA-202ENST00000345009 ADGRL2O95490 1459 aa17.82■□□□□ 0.44
SNCA-202ENST00000345009 KDM4FA0A1W2PPD8 638 aa17.81■□□□□ 0.44
SNCA-202ENST00000345009 PTPRKQ15262 1439 aa17.81■□□□□ 0.44
SNCA-202ENST00000345009 ERBINQ96RT1 1412 aa17.79■□□□□ 0.44
SNCA-202ENST00000345009 ANKRD50Q9ULJ7 1429 aa17.77■□□□□ 0.44
SNCA-202ENST00000345009 BCORL1Q5H9F3 1711 aa17.77■□□□□ 0.44
SNCA-202ENST00000345009 WASHC2CQ9Y4E1 1318 aa17.75■□□□□ 0.43
SNCA-202ENST00000345009 CNTLNQ9NXG0 1405 aa17.75■□□□□ 0.43
SNCA-202ENST00000345009 KANK1Q14678 1352 aa17.74■□□□□ 0.43
SNCA-202ENST00000345009 ADAMTSL3P82987 1691 aa17.72■□□□□ 0.43
SNCA-202ENST00000345009 SIGLEC1Q9BZZ2 1709 aa17.72■□□□□ 0.43
SNCA-202ENST00000345009 EIF2AK4Q9P2K8 1649 aaKnown RBP17.72■□□□□ 0.43
SNCA-202ENST00000345009 ACIN1Q9UKV3 1341 aaKnown RBP17.72■□□□□ 0.43
SNCA-202ENST00000345009 HFM1A2PYH4 1435 aa17.69■□□□□ 0.42
SNCA-202ENST00000345009 MADDQ8WXG6 1647 aa17.68■□□□□ 0.42
SNCA-202ENST00000345009 FAM135AQ9P2D6 1515 aa17.67■□□□□ 0.42
SNCA-202ENST00000345009 NAIPQ13075 1403 aa17.67■□□□□ 0.42
SNCA-202ENST00000345009 TRIM26Q12899 539 aaPredicted RBP17.67■□□□□ 0.42
SNCA-202ENST00000345009 ZNF219Q9P2Y4 722 aaPredicted RBP17.67■□□□□ 0.42
SNCA-202ENST00000345009 PTPRMP28827 1452 aa17.67■□□□□ 0.42
SNCA-202ENST00000345009 FER1L4A9Z1Z3 1794 aa17.66■□□□□ 0.42
SNCA-202ENST00000345009 ZMYM3Q14202 1370 aa17.66■□□□□ 0.42
SNCA-202ENST00000345009 RNF17Q9BXT8 1623 aaKnown RBP17.65■□□□□ 0.42
SNCA-202ENST00000345009 KDM5DQ9BY66 1539 aa17.63■□□□□ 0.41
SNCA-202ENST00000345009 CEBPAP49715 358 aaPredicted RBP17.63■□□□□ 0.41
SNCA-202ENST00000345009 TRIM52Q96A61 297 aa17.63■□□□□ 0.41
SNCA-202ENST00000345009 RIMS1Q86UR5 1692 aaKnown RBP17.63■□□□□ 0.41
SNCA-202ENST00000345009 NUP155O75694 1391 aa17.63■□□□□ 0.41
SNCA-202ENST00000345009 SETD5Q9C0A6 1442 aa17.61■□□□□ 0.41
SNCA-202ENST00000345009 PRDM15P57071 1507 aaPredicted RBP17.6■□□□□ 0.41
SNCA-202ENST00000345009 DEPDC5O75140 1603 aa17.58■□□□□ 0.41
SNCA-202ENST00000345009 ABCC3O15438 1527 aa17.58■□□□□ 0.41
SNCA-202ENST00000345009 MROH2AA6NES4 1674 aa17.58■□□□□ 0.4
SNCA-202ENST00000345009 CLTCQ00610 1675 aaKnown RBP17.58■□□□□ 0.4
SNCA-202ENST00000345009 SETD1BQ9UPS6 1966 aaKnown RBP17.57■□□□□ 0.4
SNCA-202ENST00000345009 HRCP23327 699 aa17.57■□□□□ 0.4
SNCA-202ENST00000345009 ZC3H13Q5T200 1668 aaKnown RBP17.57■□□□□ 0.4
SNCA-202ENST00000345009 GCC2Q8IWJ2 1684 aa17.57■□□□□ 0.4
SNCA-202ENST00000345009 NPATQ14207 1427 aa17.56■□□□□ 0.4
SNCA-202ENST00000345009 MROH1Q8NDA8 1641 aa17.56■□□□□ 0.4
SNCA-202ENST00000345009 DSG3P32926 999 aa17.55■□□□□ 0.4
SNCA-202ENST00000345009 PZPP20742 1482 aa17.55■□□□□ 0.4
SNCA-202ENST00000345009 ARHGAP31Q2M1Z3 1444 aa17.55■□□□□ 0.4
SNCA-202ENST00000345009 LMTK2Q8IWU2 1503 aa17.54■□□□□ 0.4
SNCA-202ENST00000345009 ABCB7O75027 752 aa17.54■□□□□ 0.4
SNCA-202ENST00000345009 UNC13BO14795 1591 aa17.53■□□□□ 0.4
SNCA-202ENST00000345009 FBXO31Q5XUX0 539 aaPredicted RBP17.53■□□□□ 0.4
SNCA-202ENST00000345009 VWDEQ8N2E2 1590 aa17.53■□□□□ 0.4
SNCA-202ENST00000345009 RAB3GAP2Q9H2M9 1393 aa17.53■□□□□ 0.4
SNCA-202ENST00000345009 C3P01024 1663 aa17.52■□□□□ 0.4
SNCA-202ENST00000345009 ATF5Q9Y2D1 282 aaPredicted RBP17.51■□□□□ 0.39
SNCA-202ENST00000345009 TNRQ92752 1358 aa17.51■□□□□ 0.39
SNCA-202ENST00000345009 RPRD2Q5VT52 1461 aaKnown RBP17.5■□□□□ 0.39
SNCA-202ENST00000345009 CEP152O94986 1710 aa17.49■□□□□ 0.39
SNCA-202ENST00000345009 UHRF1BP1Q6BDS2 1440 aa17.48■□□□□ 0.39
SNCA-202ENST00000345009 CAMSAP1Q5T5Y3 1602 aa17.48■□□□□ 0.39
SNCA-202ENST00000345009 IQGAP3Q86VI3 1631 aa17.48■□□□□ 0.39
SNCA-202ENST00000345009 PKD2Q13563 968 aa17.47■□□□□ 0.39
SNCA-202ENST00000345009 MPHOSPH9Q99550 1183 aa17.47■□□□□ 0.39
SNCA-202ENST00000345009 SLC52A1Q9NWF4 448 aa17.47■□□□□ 0.39
SNCA-202ENST00000345009 TET3O43151 1660 aa17.47■□□□□ 0.39
SNCA-202ENST00000345009 EFCAB6Q5THR3 1501 aa17.47■□□□□ 0.39
SNCA-202ENST00000345009 ERVK-7P63135 1459 aa17.45■□□□□ 0.38
SNCA-202ENST00000345009 ATXN8OSP0DMR3 200 aa17.45■□□□□ 0.38
SNCA-202ENST00000345009 CFAP65Q6ZU64 1925 aaKnown RBP17.45■□□□□ 0.38
SNCA-202ENST00000345009 STAG3Q9UJ98 1225 aa17.44■□□□□ 0.38
SNCA-202ENST00000345009 NLRP1Q9C000 1473 aa17.43■□□□□ 0.38
SNCA-202ENST00000345009 THEMISQ8N1K5 641 aaPredicted RBP17.42■□□□□ 0.38
SNCA-202ENST00000345009 SPATA31D1Q6ZQQ2 1576 aa17.41■□□□□ 0.38
SNCA-202ENST00000345009 PCGF6Q9BYE7 350 aa17.41■□□□□ 0.38
SNCA-202ENST00000345009 NOS1P29475 1434 aa17.4■□□□□ 0.38
SNCA-202ENST00000345009 PREX1Q8TCU6 1659 aa17.4■□□□□ 0.38
SNCA-202ENST00000345009 IDI1Q13907 227 aa17.39■□□□□ 0.37
SNCA-202ENST00000345009 A2ML1A8K2U0 1454 aa17.38■□□□□ 0.37
SNCA-202ENST00000345009 LMTK3Q96Q04 1460 aa17.37■□□□□ 0.37
SNCA-202ENST00000345009 HSPA2P54652 639 aa17.37■□□□□ 0.37
SNCA-202ENST00000345009 E9PCH4 1651 aa17.36■□□□□ 0.37
SNCA-202ENST00000345009 HDGFP51858 240 aaKnown RBP17.36■□□□□ 0.37
SNCA-202ENST00000345009 POLA2Q14181 598 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms