RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 MYO3AQ8NEV4 1616 aa19.55■□□□□ 0.72
SGCA-202ENST00000344627 ARHGEF5Q12774 1597 aa19.55■□□□□ 0.72
SGCA-202ENST00000344627 A2ML1A8K2U0 1454 aa19.54■□□□□ 0.72
SGCA-202ENST00000344627 WASHC2CQ9Y4E1 1318 aa19.53■□□□□ 0.72
SGCA-202ENST00000344627 KDM5DQ9BY66 1539 aa19.53■□□□□ 0.72
SGCA-202ENST00000344627 APLP2Q06481 763 aa19.53■□□□□ 0.72
SGCA-202ENST00000344627 PZPP20742 1482 aa19.53■□□□□ 0.72
SGCA-202ENST00000344627 LRRC9Q6ZRR7 1453 aa19.53■□□□□ 0.72
SGCA-202ENST00000344627 NCKAP5LQ9HCH0 1330 aa19.52■□□□□ 0.72
SGCA-202ENST00000344627 MIA2Q96PC5 1412 aa19.51■□□□□ 0.71
SGCA-202ENST00000344627 TNRQ92752 1358 aa19.51■□□□□ 0.71
SGCA-202ENST00000344627 KANK4Q5T7N3 995 aaPredicted RBP19.5■□□□□ 0.71
SGCA-202ENST00000344627 THEMISQ8N1K5 641 aaPredicted RBP19.49■□□□□ 0.71
SGCA-202ENST00000344627 NLRP1Q9C000 1473 aa19.48■□□□□ 0.71
SGCA-202ENST00000344627 MAST1Q9Y2H9 1570 aa19.45■□□□□ 0.7
SGCA-202ENST00000344627 DNMT1P26358 1616 aaKnown RBP19.45■□□□□ 0.7
SGCA-202ENST00000344627 ANKLE2Q86XL3 938 aa19.45■□□□□ 0.7
SGCA-202ENST00000344627 ZNF335Q9H4Z2 1342 aaPredicted RBP19.45■□□□□ 0.7
SGCA-202ENST00000344627 MYOM3Q5VTT5 1437 aa19.44■□□□□ 0.7
SGCA-202ENST00000344627 FBXO31Q5XUX0 539 aaPredicted RBP19.42■□□□□ 0.7
SGCA-202ENST00000344627 DISP3Q9P2K9 1392 aa19.42■□□□□ 0.7
SGCA-202ENST00000344627 CPS1P31327 1500 aa19.41■□□□□ 0.7
SGCA-202ENST00000344627 EIF2AK4Q9P2K8 1649 aaKnown RBP19.4■□□□□ 0.7
SGCA-202ENST00000344627 UBAP1LF5GYI3 381 aa19.4■□□□□ 0.7
SGCA-202ENST00000344627 ZC3H13Q5T200 1668 aaKnown RBP19.4■□□□□ 0.7
SGCA-202ENST00000344627 RNF17Q9BXT8 1623 aaKnown RBP19.39■□□□□ 0.69
SGCA-202ENST00000344627 MED14O60244 1454 aa19.38■□□□□ 0.69
SGCA-202ENST00000344627 UGGT1Q9NYU2 1555 aa19.38■□□□□ 0.69
SGCA-202ENST00000344627 TOM1O60784 492 aa19.37■□□□□ 0.69
SGCA-202ENST00000344627 DUOX2Q9NRD8 1548 aa19.36■□□□□ 0.69
SGCA-202ENST00000344627 ABCC3O15438 1527 aa19.35■□□□□ 0.69
SGCA-202ENST00000344627 SHANK2Q9UPX8 1470 aa19.35■□□□□ 0.69
SGCA-202ENST00000344627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.34■□□□□ 0.69
SGCA-202ENST00000344627 DEPDC5O75140 1603 aa19.34■□□□□ 0.69
SGCA-202ENST00000344627 SPATA31D1Q6ZQQ2 1576 aa19.34■□□□□ 0.69
SGCA-202ENST00000344627 POLR1AO95602 1720 aaPredicted RBP19.33■□□□□ 0.68
SGCA-202ENST00000344627 ERBINQ96RT1 1412 aa19.33■□□□□ 0.68
SGCA-202ENST00000344627 NPHP4O75161 1426 aaPredicted RBP19.32■□□□□ 0.68
SGCA-202ENST00000344627 ARHGAP31Q2M1Z3 1444 aa19.32■□□□□ 0.68
SGCA-202ENST00000344627 NEURL4Q96JN8 1562 aa19.32■□□□□ 0.68
SGCA-202ENST00000344627 ERVK-7P63135 1459 aa19.3■□□□□ 0.68
SGCA-202ENST00000344627 SOCS7O14512 581 aa19.3■□□□□ 0.68
SGCA-202ENST00000344627 KIF15Q9NS87 1388 aa19.29■□□□□ 0.68
SGCA-202ENST00000344627 KANK1Q14678 1352 aa19.28■□□□□ 0.68
SGCA-202ENST00000344627 PTPN23Q9H3S7 1636 aa19.28■□□□□ 0.68
SGCA-202ENST00000344627 ABCC5O15440 1437 aa19.26■□□□□ 0.67
SGCA-202ENST00000344627 RRP7BPQ9NSQ0 103 aa19.26■□□□□ 0.67
SGCA-202ENST00000344627 PRDM15P57071 1507 aaPredicted RBP19.25■□□□□ 0.67
SGCA-202ENST00000344627 ANKRD30AQ9BXX3 1397 aa19.24■□□□□ 0.67
SGCA-202ENST00000344627 MROH1Q8NDA8 1641 aa19.24■□□□□ 0.67
SGCA-202ENST00000344627 FGD6Q6ZV73 1430 aa19.24■□□□□ 0.67
SGCA-202ENST00000344627 VWDEQ8N2E2 1590 aa19.23■□□□□ 0.67
SGCA-202ENST00000344627 ILDR2Q71H61 639 aa19.23■□□□□ 0.67
SGCA-202ENST00000344627 CHIC2Q9UKJ5 165 aa19.23■□□□□ 0.67
SGCA-202ENST00000344627 EID1Q9Y6B2 187 aa19.23■□□□□ 0.67
SGCA-202ENST00000344627 DAPK1P53355 1430 aa19.23■□□□□ 0.67
SGCA-202ENST00000344627 CFAP65Q6ZU64 1925 aaKnown RBP19.22■□□□□ 0.67
SGCA-202ENST00000344627 FAM50AQ14320 339 aaKnown RBP19.22■□□□□ 0.67
SGCA-202ENST00000344627 IQGAP1P46940 1657 aa19.21■□□□□ 0.67
SGCA-202ENST00000344627 SCAF11Q99590 1463 aaKnown RBP19.21■□□□□ 0.67
SGCA-202ENST00000344627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.2■□□□□ 0.66
SGCA-202ENST00000344627 CROCC2H7BZ55 1655 aa19.2■□□□□ 0.66
SGCA-202ENST00000344627 SLIT1O75093 1534 aa19.2■□□□□ 0.66
SGCA-202ENST00000344627 ARHGAP23Q9P227 1491 aa19.19■□□□□ 0.66
SGCA-202ENST00000344627 LMTK2Q8IWU2 1503 aa19.19■□□□□ 0.66
SGCA-202ENST00000344627 TXNDC2Q86VQ3 553 aa19.18■□□□□ 0.66
SGCA-202ENST00000344627 SCAF1Q9H7N4 1312 aaKnown RBP19.18■□□□□ 0.66
SGCA-202ENST00000344627 PIP4K2BP78356 416 aa19.17■□□□□ 0.66
SGCA-202ENST00000344627 SYNMO15061 1565 aa19.17■□□□□ 0.66
SGCA-202ENST00000344627 STAG3Q9UJ98 1225 aa19.16■□□□□ 0.66
SGCA-202ENST00000344627 CEP152O94986 1710 aa19.16■□□□□ 0.66
SGCA-202ENST00000344627 UBR1Q8IWV7 1749 aa19.15■□□□□ 0.66
SGCA-202ENST00000344627 HSPA1LP34931 641 aa19.15■□□□□ 0.66
SGCA-202ENST00000344627 SLC52A1Q9NWF4 448 aa19.14■□□□□ 0.65
SGCA-202ENST00000344627 TMEM2Q9UHN6 1383 aa19.14■□□□□ 0.65
SGCA-202ENST00000344627 LRRC7Q96NW7 1537 aa19.14■□□□□ 0.65
SGCA-202ENST00000344627 KDM5AP29375 1690 aaKnown RBP19.14■□□□□ 0.65
SGCA-202ENST00000344627 ADGRL2O95490 1459 aa19.13■□□□□ 0.65
SGCA-202ENST00000344627 LTKP29376 864 aa19.11■□□□□ 0.65
SGCA-202ENST00000344627 PPARGC1BQ86YN6 1023 aaKnown RBP19.11■□□□□ 0.65
SGCA-202ENST00000344627 RPRD2Q5VT52 1461 aaKnown RBP19.1■□□□□ 0.65
SGCA-202ENST00000344627 HDGFP51858 240 aaKnown RBP19.1■□□□□ 0.65
SGCA-202ENST00000344627 NOS1P29475 1434 aa19.08■□□□□ 0.65
SGCA-202ENST00000344627 IDI1Q13907 227 aa19.08■□□□□ 0.64
SGCA-202ENST00000344627 EFCAB6Q5THR3 1501 aa19.08■□□□□ 0.64
SGCA-202ENST00000344627 ANKRD50Q9ULJ7 1429 aa19.06■□□□□ 0.64
SGCA-202ENST00000344627 KCNA6P17658 529 aa19.05■□□□□ 0.64
SGCA-202ENST00000344627 PIK3C2BO00750 1634 aa19.04■□□□□ 0.64
SGCA-202ENST00000344627 MED1Q15648 1581 aaPredicted RBP19.03■□□□□ 0.64
SGCA-202ENST00000344627 ITGAEP38570 1179 aa19.03■□□□□ 0.64
SGCA-202ENST00000344627 ALKQ9UM73 1620 aa19.03■□□□□ 0.64
SGCA-202ENST00000344627 PHF23Q9BUL5 403 aaPredicted RBP19.01■□□□□ 0.63
SGCA-202ENST00000344627 FAM135BQ49AJ0 1406 aa19■□□□□ 0.63
SGCA-202ENST00000344627 ADGRB3O60242 1522 aa19■□□□□ 0.63
SGCA-202ENST00000344627 ROCK1Q13464 1354 aa19■□□□□ 0.63
SGCA-202ENST00000344627 STRCP1A6NGW2 1772 aa19■□□□□ 0.63
SGCA-202ENST00000344627 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.98■□□□□ 0.63
SGCA-202ENST00000344627 TET3O43151 1660 aa18.98■□□□□ 0.63
SGCA-202ENST00000344627 NKTRP30414 1462 aaKnown RBP18.97■□□□□ 0.63
SGCA-202ENST00000344627 TMEM94Q12767 1356 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms