RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 IQGAP3Q86VI3 1631 aa10.94□□□□□ -0.66
GDNF-202ENST00000344622 ARHGEF40Q8TER5 1519 aa10.94□□□□□ -0.66
GDNF-202ENST00000344622 A2MP01023 1474 aa10.93□□□□□ -0.66
GDNF-202ENST00000344622 RNF17Q9BXT8 1623 aaKnown RBP10.93□□□□□ -0.66
GDNF-202ENST00000344622 UGGT1Q9NYU2 1555 aa10.93□□□□□ -0.66
GDNF-202ENST00000344622 PRDM15P57071 1507 aaPredicted RBP10.93□□□□□ -0.66
GDNF-202ENST00000344622 DHX29Q7Z478 1369 aaKnown RBP10.93□□□□□ -0.66
GDNF-202ENST00000344622 KDM5DQ9BY66 1539 aa10.92□□□□□ -0.66
GDNF-202ENST00000344622 ERBINQ96RT1 1412 aa10.92□□□□□ -0.66
GDNF-202ENST00000344622 MPHOSPH9Q99550 1183 aa10.92□□□□□ -0.66
GDNF-202ENST00000344622 EIF2AK4Q9P2K8 1649 aaKnown RBP10.91□□□□□ -0.66
GDNF-202ENST00000344622 RSPH4AQ5TD94 716 aa10.91□□□□□ -0.66
GDNF-202ENST00000344622 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.91□□□□□ -0.66
GDNF-202ENST00000344622 CCER1Q8TC90 406 aaPredicted RBP10.91□□□□□ -0.66
GDNF-202ENST00000344622 KIF3BO15066 747 aa10.9□□□□□ -0.66
GDNF-202ENST00000344622 NUP155O75694 1391 aa10.9□□□□□ -0.67
GDNF-202ENST00000344622 TRIM52Q96A61 297 aa10.88□□□□□ -0.67
GDNF-202ENST00000344622 CLTCQ00610 1675 aaKnown RBP10.88□□□□□ -0.67
GDNF-202ENST00000344622 ATP10AO60312 1499 aa10.87□□□□□ -0.67
GDNF-202ENST00000344622 ANKRD30BQ9BXX2 1392 aa10.87□□□□□ -0.67
GDNF-202ENST00000344622 MYT1LQ9UL68 1186 aa10.87□□□□□ -0.67
GDNF-202ENST00000344622 GGT6Q6P531 493 aa10.87□□□□□ -0.67
GDNF-202ENST00000344622 MYO5BQ9ULV0 1848 aa10.86□□□□□ -0.67
GDNF-202ENST00000344622 REREQ9P2R6 1566 aa10.86□□□□□ -0.67
GDNF-202ENST00000344622 ABCC3O15438 1527 aa10.86□□□□□ -0.67
GDNF-202ENST00000344622 CAMSAP1Q5T5Y3 1602 aa10.86□□□□□ -0.67
GDNF-202ENST00000344622 PKD2Q13563 968 aa10.86□□□□□ -0.67
GDNF-202ENST00000344622 MROH2AA6NES4 1674 aa10.85□□□□□ -0.67
GDNF-202ENST00000344622 SLC4A1APQ9BWU0 796 aaKnown RBP10.85□□□□□ -0.67
GDNF-202ENST00000344622 TET3O43151 1660 aa10.85□□□□□ -0.67
GDNF-202ENST00000344622 NPATQ14207 1427 aa10.85□□□□□ -0.67
GDNF-202ENST00000344622 MLECQ14165 292 aa10.85□□□□□ -0.67
GDNF-202ENST00000344622 SPHKAPQ2M3C7 1700 aa10.84□□□□□ -0.67
GDNF-202ENST00000344622 SYNMO15061 1565 aa10.84□□□□□ -0.67
GDNF-202ENST00000344622 EFCAB6Q5THR3 1501 aa10.84□□□□□ -0.67
GDNF-202ENST00000344622 CLTCL1P53675 1640 aa10.84□□□□□ -0.67
GDNF-202ENST00000344622 NEUROD1Q13562 356 aa10.83□□□□□ -0.68
GDNF-202ENST00000344622 FBXO31Q5XUX0 539 aaPredicted RBP10.82□□□□□ -0.68
GDNF-202ENST00000344622 AGLP35573 1532 aa10.81□□□□□ -0.68
GDNF-202ENST00000344622 PREX1Q8TCU6 1659 aa10.81□□□□□ -0.68
GDNF-202ENST00000344622 LMTK2Q8IWU2 1503 aa10.8□□□□□ -0.68
GDNF-202ENST00000344622 C3P01024 1663 aa10.8□□□□□ -0.68
GDNF-202ENST00000344622 MADDQ8WXG6 1647 aa10.8□□□□□ -0.68
GDNF-202ENST00000344622 CEBPAP49715 358 aaPredicted RBP10.79□□□□□ -0.68
GDNF-202ENST00000344622 FER1L4A9Z1Z3 1794 aa10.79□□□□□ -0.68
GDNF-202ENST00000344622 PIK3C2BO00750 1634 aa10.79□□□□□ -0.68
GDNF-202ENST00000344622 RPRD2Q5VT52 1461 aaKnown RBP10.78□□□□□ -0.68
GDNF-202ENST00000344622 PTPRTO14522 1441 aa10.77□□□□□ -0.68
GDNF-202ENST00000344622 ADAMTSL3P82987 1691 aa10.77□□□□□ -0.69
GDNF-202ENST00000344622 ZC3H13Q5T200 1668 aaKnown RBP10.77□□□□□ -0.69
GDNF-202ENST00000344622 TRPM2O94759 1503 aa10.76□□□□□ -0.69
GDNF-202ENST00000344622 WASHC2CQ9Y4E1 1318 aa10.75□□□□□ -0.69
GDNF-202ENST00000344622 RIMS1Q86UR5 1692 aaKnown RBP10.75□□□□□ -0.69
GDNF-202ENST00000344622 IFT172Q9UG01 1749 aa10.75□□□□□ -0.69
GDNF-202ENST00000344622 NBPF8Q3BBV2 869 aa10.75□□□□□ -0.69
GDNF-202ENST00000344622 L3MBTL2Q969R5 705 aa10.74□□□□□ -0.69
GDNF-202ENST00000344622 NOS1P29475 1434 aa10.74□□□□□ -0.69
GDNF-202ENST00000344622 SPATA31E1Q6ZUB1 1445 aa10.74□□□□□ -0.69
GDNF-202ENST00000344622 SENP3Q9H4L4 574 aaPredicted RBP10.73□□□□□ -0.69
GDNF-202ENST00000344622 ZMYM3Q14202 1370 aa10.72□□□□□ -0.69
GDNF-202ENST00000344622 TMEM131LA2VDJ0 1609 aa10.72□□□□□ -0.69
GDNF-202ENST00000344622 ARID4BQ4LE39 1312 aaPredicted RBP10.72□□□□□ -0.69
GDNF-202ENST00000344622 PLPPR3Q6T4P5 718 aa10.71□□□□□ -0.69
GDNF-202ENST00000344622 SPATA31D1Q6ZQQ2 1576 aa10.71□□□□□ -0.7
GDNF-202ENST00000344622 ERVK-7P63135 1459 aa10.71□□□□□ -0.7
GDNF-202ENST00000344622 KIF1BO60333 1816 aa10.71□□□□□ -0.7
GDNF-202ENST00000344622 KDM4FA0A1W2PPD8 638 aa10.7□□□□□ -0.7
GDNF-202ENST00000344622 HIRIP3Q9BW71 556 aaPredicted RBP10.7□□□□□ -0.7
GDNF-202ENST00000344622 IDI1Q13907 227 aa10.7□□□□□ -0.7
GDNF-202ENST00000344622 RGL3Q3MIN7 710 aa10.7□□□□□ -0.7
GDNF-202ENST00000344622 NUTM2DQ5VT03 806 aaPredicted RBP10.7□□□□□ -0.7
GDNF-202ENST00000344622 ARHGAP31Q2M1Z3 1444 aa10.7□□□□□ -0.7
GDNF-202ENST00000344622 PPLO60437 1756 aa10.7□□□□□ -0.7
GDNF-202ENST00000344622 ADGRB3O60242 1522 aa10.69□□□□□ -0.7
GDNF-202ENST00000344622 CLSPNQ9HAW4 1339 aa10.68□□□□□ -0.7
GDNF-202ENST00000344622 UBR1Q8IWV7 1749 aa10.68□□□□□ -0.7
GDNF-202ENST00000344622 PPP1R15AO75807 674 aaPredicted RBP10.68□□□□□ -0.7
GDNF-202ENST00000344622 CCDC144AA2RUR9 1427 aa10.67□□□□□ -0.7
GDNF-202ENST00000344622 NEXMIFQ5QGS0 1516 aa10.66□□□□□ -0.7
GDNF-202ENST00000344622 TRPM1Q7Z4N2 1603 aa10.65□□□□□ -0.7
GDNF-202ENST00000344622 MYO3AQ8NEV4 1616 aa10.65□□□□□ -0.7
GDNF-202ENST00000344622 KANK1Q14678 1352 aa10.65□□□□□ -0.7
GDNF-202ENST00000344622 NRXN3Q9Y4C0 1643 aa10.65□□□□□ -0.71
GDNF-202ENST00000344622 NBPF1Q3BBV0 1214 aa10.64□□□□□ -0.71
GDNF-202ENST00000344622 KDM2AQ9Y2K7 1162 aa10.64□□□□□ -0.71
GDNF-202ENST00000344622 ADGRF5Q8IZF2 1346 aa10.64□□□□□ -0.71
GDNF-202ENST00000344622 SETD1AO15047 1707 aaKnown RBP10.64□□□□□ -0.71
GDNF-202ENST00000344622 CNTLNQ9NXG0 1405 aa10.64□□□□□ -0.71
GDNF-202ENST00000344622 DCAF11Q8TEB1 546 aa10.63□□□□□ -0.71
GDNF-202ENST00000344622 A2ML1A8K2U0 1454 aa10.63□□□□□ -0.71
GDNF-202ENST00000344622 PTPRMP28827 1452 aa10.62□□□□□ -0.71
GDNF-202ENST00000344622 ASXL1Q8IXJ9 1541 aa10.61□□□□□ -0.71
GDNF-202ENST00000344622 PRAG1Q86YV5 1406 aa10.61□□□□□ -0.71
GDNF-202ENST00000344622 TONSLQ96HA7 1378 aa10.61□□□□□ -0.71
GDNF-202ENST00000344622 IQGAP1P46940 1657 aa10.6□□□□□ -0.71
GDNF-202ENST00000344622 C11orf95C9JLR9 678 aaPredicted RBP10.6□□□□□ -0.71
GDNF-202ENST00000344622 NRXN1Q9ULB1 1477 aa10.6□□□□□ -0.71
GDNF-202ENST00000344622 ZNF326Q5BKZ1 582 aaKnown RBP10.6□□□□□ -0.71
GDNF-202ENST00000344622 ZFYVE9O95405 1425 aa10.59□□□□□ -0.71
GDNF-202ENST00000344622 NEURL4Q96JN8 1562 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms