RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 DUOX2Q9NRD8 1548 aa24.84■■□□□ 1.57
ATG4B-201ENST00000344376 WASHC2CQ9Y4E1 1318 aa24.83■■□□□ 1.56
ATG4B-201ENST00000344376 KIF15Q9NS87 1388 aa24.82■■□□□ 1.56
ATG4B-201ENST00000344376 EIF2AK4Q9P2K8 1649 aaKnown RBP24.82■■□□□ 1.56
ATG4B-201ENST00000344376 FAM50AQ14320 339 aaKnown RBP24.81■■□□□ 1.56
ATG4B-201ENST00000344376 PTPRKQ15262 1439 aa24.81■■□□□ 1.56
ATG4B-201ENST00000344376 RNF17Q9BXT8 1623 aaKnown RBP24.8■■□□□ 1.56
ATG4B-201ENST00000344376 RRP7BPQ9NSQ0 103 aa24.78■■□□□ 1.56
ATG4B-201ENST00000344376 ANKRD30AQ9BXX3 1397 aa24.78■■□□□ 1.56
ATG4B-201ENST00000344376 ERBINQ96RT1 1412 aa24.77■■□□□ 1.56
ATG4B-201ENST00000344376 CHIC2Q9UKJ5 165 aa24.76■■□□□ 1.55
ATG4B-201ENST00000344376 PZPP20742 1482 aa24.75■■□□□ 1.55
ATG4B-201ENST00000344376 DMRT2Q9Y5R5 561 aa24.73■■□□□ 1.55
ATG4B-201ENST00000344376 MYO3AQ8NEV4 1616 aa24.73■■□□□ 1.55
ATG4B-201ENST00000344376 ZC3H13Q5T200 1668 aaKnown RBP24.72■■□□□ 1.55
ATG4B-201ENST00000344376 ABCC3O15438 1527 aa24.71■■□□□ 1.55
ATG4B-201ENST00000344376 NCOA1Q15788 1441 aa24.7■■□□□ 1.54
ATG4B-201ENST00000344376 TNRQ92752 1358 aa24.7■■□□□ 1.54
ATG4B-201ENST00000344376 ADGRL2O95490 1459 aa24.69■■□□□ 1.54
ATG4B-201ENST00000344376 PPARGC1BQ86YN6 1023 aaKnown RBP24.69■■□□□ 1.54
ATG4B-201ENST00000344376 CEP170BQ9Y4F5 1589 aaPredicted RBP24.69■■□□□ 1.54
ATG4B-201ENST00000344376 ZNF142P52746 1687 aaPredicted RBP24.69■■□□□ 1.54
ATG4B-201ENST00000344376 MROH1Q8NDA8 1641 aa24.68■■□□□ 1.54
ATG4B-201ENST00000344376 FBXO31Q5XUX0 539 aaPredicted RBP24.67■■□□□ 1.54
ATG4B-201ENST00000344376 PRDM15P57071 1507 aaPredicted RBP24.66■■□□□ 1.54
ATG4B-201ENST00000344376 CAMSAP1Q5T5Y3 1602 aa24.66■■□□□ 1.54
ATG4B-201ENST00000344376 STRCQ7RTU9 1775 aa24.66■■□□□ 1.54
ATG4B-201ENST00000344376 A2ML1A8K2U0 1454 aa24.65■■□□□ 1.54
ATG4B-201ENST00000344376 KANK1Q14678 1352 aa24.64■■□□□ 1.54
ATG4B-201ENST00000344376 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.63■■□□□ 1.536e-14■■□□□ 12
ATG4B-201ENST00000344376 PTPRTO14522 1441 aa24.62■■□□□ 1.53
ATG4B-201ENST00000344376 PLA2R1Q13018 1463 aa24.61■■□□□ 1.53
ATG4B-201ENST00000344376 DEPDC5O75140 1603 aa24.61■■□□□ 1.53
ATG4B-201ENST00000344376 CEP152O94986 1710 aa24.6■■□□□ 1.53
ATG4B-201ENST00000344376 NLRP1Q9C000 1473 aa24.6■■□□□ 1.53
ATG4B-201ENST00000344376 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.59■■□□□ 1.535e-9■■■■□ 24.7
ATG4B-201ENST00000344376 ILDR1Q86SU0 546 aaPredicted RBP24.59■■□□□ 1.53
ATG4B-201ENST00000344376 ANKRD50Q9ULJ7 1429 aa24.58■■□□□ 1.53
ATG4B-201ENST00000344376 PKD2Q13563 968 aa24.58■■□□□ 1.52
ATG4B-201ENST00000344376 ERVK-7P63135 1459 aa24.58■■□□□ 1.52
ATG4B-201ENST00000344376 SPATA31D1Q6ZQQ2 1576 aa24.57■■□□□ 1.52
ATG4B-201ENST00000344376 ARHGAP31Q2M1Z3 1444 aa24.56■■□□□ 1.52
ATG4B-201ENST00000344376 ROCK1Q13464 1354 aa24.56■■□□□ 1.52
ATG4B-201ENST00000344376 NCKAP5LQ9HCH0 1330 aa24.54■■□□□ 1.52
ATG4B-201ENST00000344376 ITGAEP38570 1179 aa24.54■■□□□ 1.52
ATG4B-201ENST00000344376 LMTK2Q8IWU2 1503 aa24.52■■□□□ 1.52
ATG4B-201ENST00000344376 THEMISQ8N1K5 641 aaPredicted RBP24.51■■□□□ 1.51
ATG4B-201ENST00000344376 VWDEQ8N2E2 1590 aa24.51■■□□□ 1.51
ATG4B-201ENST00000344376 UGGT1Q9NYU2 1555 aa24.51■■□□□ 1.51
ATG4B-201ENST00000344376 FBXO41Q8TF61 875 aa24.5■■□□□ 1.51
ATG4B-201ENST00000344376 RRBP1Q9P2E9 1410 aaKnown RBP24.49■■□□□ 1.51
ATG4B-201ENST00000344376 CERKQ8TCT0 537 aa24.49■■□□□ 1.51
ATG4B-201ENST00000344376 EFCAB6Q5THR3 1501 aa24.45■■□□□ 1.5
ATG4B-201ENST00000344376 ANKLE2Q86XL3 938 aa24.44■■□□□ 1.5
ATG4B-201ENST00000344376 UNC13BO14795 1591 aa24.42■■□□□ 1.5
ATG4B-201ENST00000344376 POLR1AO95602 1720 aaPredicted RBP24.41■■□□□ 1.5
ATG4B-201ENST00000344376 CFAP65Q6ZU64 1925 aaKnown RBP24.41■■□□□ 1.5
ATG4B-201ENST00000344376 RPRD2Q5VT52 1461 aaKnown RBP24.39■■□□□ 1.5
ATG4B-201ENST00000344376 NEURL4Q96JN8 1562 aa24.37■■□□□ 1.49
ATG4B-201ENST00000344376 TET3O43151 1660 aa24.37■■□□□ 1.49
ATG4B-201ENST00000344376 NOS1P29475 1434 aa24.36■■□□□ 1.49
ATG4B-201ENST00000344376 UBR1Q8IWV7 1749 aa24.36■■□□□ 1.49
ATG4B-201ENST00000344376 LTBP4Q8N2S1 1624 aa24.36■■□□□ 1.49
ATG4B-201ENST00000344376 STAG3Q9UJ98 1225 aa24.36■■□□□ 1.49
ATG4B-201ENST00000344376 NPHP4O75161 1426 aaPredicted RBP24.34■■□□□ 1.49
ATG4B-201ENST00000344376 ZNF335Q9H4Z2 1342 aaPredicted RBP24.34■■□□□ 1.49
ATG4B-201ENST00000344376 MED14O60244 1454 aa24.33■■□□□ 1.49
ATG4B-201ENST00000344376 NUP155O75694 1391 aa24.33■■□□□ 1.49
ATG4B-201ENST00000344376 SYNMO15061 1565 aa24.33■■□□□ 1.48
ATG4B-201ENST00000344376 GCC2Q8IWJ2 1684 aa24.32■■□□□ 1.48
ATG4B-201ENST00000344376 PIK3C2BO00750 1634 aa24.32■■□□□ 1.48
ATG4B-201ENST00000344376 IQGAP3Q86VI3 1631 aa24.32■■□□□ 1.48
ATG4B-201ENST00000344376 SLC52A1Q9NWF4 448 aa24.32■■□□□ 1.48
ATG4B-201ENST00000344376 IDI1Q13907 227 aa24.3■■□□□ 1.48
ATG4B-201ENST00000344376 SLIT1O75093 1534 aa24.3■■□□□ 1.48
ATG4B-201ENST00000344376 IQSEC2Q5JU85 1478 aa24.3■■□□□ 1.48
ATG4B-201ENST00000344376 SCAF11Q99590 1463 aaKnown RBP24.3■■□□□ 1.48
ATG4B-201ENST00000344376 ARHGAP23Q9P227 1491 aa24.29■■□□□ 1.48
ATG4B-201ENST00000344376 EID1Q9Y6B2 187 aa24.29■■□□□ 1.48
ATG4B-201ENST00000344376 KDM5AP29375 1690 aaKnown RBP24.28■■□□□ 1.48
ATG4B-201ENST00000344376 IQGAP1P46940 1657 aa24.27■■□□□ 1.48
ATG4B-201ENST00000344376 TXNDC2Q86VQ3 553 aa24.27■■□□□ 1.48
ATG4B-201ENST00000344376 NAIPQ13075 1403 aa24.26■■□□□ 1.47
ATG4B-201ENST00000344376 TMEM2Q9UHN6 1383 aa24.26■■□□□ 1.47
ATG4B-201ENST00000344376 ADGRB3O60242 1522 aa24.26■■□□□ 1.47
ATG4B-201ENST00000344376 E9PCH4 1651 aa24.23■■□□□ 1.47
ATG4B-201ENST00000344376 HFM1A2PYH4 1435 aa24.23■■□□□ 1.47
ATG4B-201ENST00000344376 LTKP29376 864 aa24.22■■□□□ 1.47
ATG4B-201ENST00000344376 CPS1P31327 1500 aa24.22■■□□□ 1.47
ATG4B-201ENST00000344376 CHGAP10645 457 aaKnown RBP24.15■■□□□ 1.46
ATG4B-201ENST00000344376 HDGFP51858 240 aaKnown RBP24.14■■□□□ 1.45
ATG4B-201ENST00000344376 TRIM52Q96A61 297 aa24.13■■□□□ 1.45
ATG4B-201ENST00000344376 TMEM131LA2VDJ0 1609 aa24.12■■□□□ 1.45
ATG4B-201ENST00000344376 UBAP1LF5GYI3 381 aa24.11■■□□□ 1.45
ATG4B-201ENST00000344376 PPP1R15AO75807 674 aaPredicted RBP24.11■■□□□ 1.45
ATG4B-201ENST00000344376 RIMS2Q9UQ26 1411 aa24.1■■□□□ 1.45
ATG4B-201ENST00000344376 BCANQ96GW7 911 aa24.09■■□□□ 1.45
ATG4B-201ENST00000344376 ZFYVE9O95405 1425 aa24.09■■□□□ 1.45
ATG4B-201ENST00000344376 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.08■■□□□ 1.45
ATG4B-201ENST00000344376 SPHKAPQ2M3C7 1700 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms