RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 FGD6Q6ZV73 1430 aa28.71■■■□□ 2.19
CDHR4-201ENST00000343366 RSPH4AQ5TD94 716 aa28.71■■■□□ 2.19
CDHR4-201ENST00000343366 UBAP1LF5GYI3 381 aa28.7■■■□□ 2.18
CDHR4-201ENST00000343366 A2ML1A8K2U0 1454 aa28.69■■■□□ 2.18
CDHR4-201ENST00000343366 NEURL4Q96JN8 1562 aa28.68■■■□□ 2.18
CDHR4-201ENST00000343366 PPARGC1BQ86YN6 1023 aaKnown RBP28.68■■■□□ 2.18
CDHR4-201ENST00000343366 PPP6R1Q9UPN7 881 aa28.68■■■□□ 2.18
CDHR4-201ENST00000343366 POLR1AO95602 1720 aaPredicted RBP28.68■■■□□ 2.18
CDHR4-201ENST00000343366 CAMSAP2Q08AD1 1489 aa28.67■■■□□ 2.18
CDHR4-201ENST00000343366 PTPN23Q9H3S7 1636 aa28.67■■■□□ 2.18
CDHR4-201ENST00000343366 MBD5Q9P267 1494 aa28.66■■■□□ 2.18
CDHR4-201ENST00000343366 GGT6Q6P531 493 aa28.62■■■□□ 2.17
CDHR4-201ENST00000343366 ARHGEF5Q12774 1597 aa28.61■■■□□ 2.17
CDHR4-201ENST00000343366 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.61■■■□□ 2.17
CDHR4-201ENST00000343366 MED1Q15648 1581 aaPredicted RBP28.6■■■□□ 2.17
CDHR4-201ENST00000343366 RTEL1-TNFRSF6BF6WH68 1400 aa28.6■■■□□ 2.17
CDHR4-201ENST00000343366 CPS1P31327 1500 aa28.59■■■□□ 2.17
CDHR4-201ENST00000343366 ZNF644Q9H582 1327 aaPredicted RBP28.59■■■□□ 2.17
CDHR4-201ENST00000343366 FAM135AQ9P2D6 1515 aa28.58■■■□□ 2.17
CDHR4-201ENST00000343366 ALKQ9UM73 1620 aa28.58■■■□□ 2.17
CDHR4-201ENST00000343366 CCDC141Q6ZP82 1450 aa28.56■■■□□ 2.16
CDHR4-201ENST00000343366 RRBP1Q9P2E9 1410 aaKnown RBP28.56■■■□□ 2.16
CDHR4-201ENST00000343366 VWDEQ8N2E2 1590 aa28.55■■■□□ 2.16
CDHR4-201ENST00000343366 PZPP20742 1482 aa28.54■■■□□ 2.16
CDHR4-201ENST00000343366 DHX29Q7Z478 1369 aaKnown RBP28.54■■■□□ 2.16
CDHR4-201ENST00000343366 SHANK2Q9UPX8 1470 aa28.53■■■□□ 2.16
CDHR4-201ENST00000343366 TSPY4P0CV99 314 aa28.52■■■□□ 2.16
CDHR4-201ENST00000343366 TSPY10P0CW01 314 aa28.52■■■□□ 2.16
CDHR4-201ENST00000343366 KDM5DQ9BY66 1539 aa28.52■■■□□ 2.16
CDHR4-201ENST00000343366 HSPA1LP34931 641 aa28.51■■■□□ 2.15
CDHR4-201ENST00000343366 FAM50AQ14320 339 aaKnown RBP28.5■■■□□ 2.15
CDHR4-201ENST00000343366 TNRQ92752 1358 aa28.5■■■□□ 2.15
CDHR4-201ENST00000343366 DEPDC5O75140 1603 aa28.49■■■□□ 2.15
CDHR4-201ENST00000343366 MED14O60244 1454 aa28.48■■■□□ 2.15
CDHR4-201ENST00000343366 FBXO31Q5XUX0 539 aaPredicted RBP28.47■■■□□ 2.15
CDHR4-201ENST00000343366 MAST1Q9Y2H9 1570 aa28.45■■■□□ 2.14
CDHR4-201ENST00000343366 CROCC2H7BZ55 1655 aa28.45■■■□□ 2.14
CDHR4-201ENST00000343366 DAPK1P53355 1430 aa28.44■■■□□ 2.14
CDHR4-201ENST00000343366 STRCP1A6NGW2 1772 aa28.42■■■□□ 2.14
CDHR4-201ENST00000343366 NLRP1Q9C000 1473 aa28.42■■■□□ 2.14
CDHR4-201ENST00000343366 TOM1O60784 492 aa28.41■■■□□ 2.14
CDHR4-201ENST00000343366 ABCC5O15440 1437 aa28.41■■■□□ 2.14
CDHR4-201ENST00000343366 UGGT1Q9NYU2 1555 aa28.38■■■□□ 2.13
CDHR4-201ENST00000343366 IQGAP1P46940 1657 aa28.38■■■□□ 2.13
CDHR4-201ENST00000343366 KIF3BO15066 747 aa28.37■■■□□ 2.13
CDHR4-201ENST00000343366 PIP4K2BP78356 416 aa28.37■■■□□ 2.13
CDHR4-201ENST00000343366 NPHP4O75161 1426 aaPredicted RBP28.36■■■□□ 2.13
CDHR4-201ENST00000343366 RNF17Q9BXT8 1623 aaKnown RBP28.36■■■□□ 2.13
CDHR4-201ENST00000343366 ANKLE2Q86XL3 938 aa28.34■■■□□ 2.13
CDHR4-201ENST00000343366 SCAF1Q9H7N4 1312 aaKnown RBP28.32■■■□□ 2.12
CDHR4-201ENST00000343366 ZC3H13Q5T200 1668 aaKnown RBP28.32■■■□□ 2.12
CDHR4-201ENST00000343366 THEMISQ8N1K5 641 aaPredicted RBP28.31■■■□□ 2.12
CDHR4-201ENST00000343366 ANKRD30AQ9BXX3 1397 aa28.31■■■□□ 2.12
CDHR4-201ENST00000343366 SYNMO15061 1565 aa28.31■■■□□ 2.12
CDHR4-201ENST00000343366 LRRC7Q96NW7 1537 aa28.3■■■□□ 2.12
CDHR4-201ENST00000343366 ADGRL2O95490 1459 aa28.3■■■□□ 2.12
CDHR4-201ENST00000343366 WASHC2CQ9Y4E1 1318 aa28.3■■■□□ 2.12
CDHR4-201ENST00000343366 ROCK1Q13464 1354 aa28.28■■■□□ 2.12
CDHR4-201ENST00000343366 ABCC3O15438 1527 aa28.28■■■□□ 2.12
CDHR4-201ENST00000343366 MROH1Q8NDA8 1641 aa28.26■■■□□ 2.11
CDHR4-201ENST00000343366 EIF2AK4Q9P2K8 1649 aaKnown RBP28.23■■■□□ 2.11
CDHR4-201ENST00000343366 UBR1Q8IWV7 1749 aa28.23■■■□□ 2.11
CDHR4-201ENST00000343366 DUOX2Q9NRD8 1548 aa28.23■■■□□ 2.11
CDHR4-201ENST00000343366 ERVK-7P63135 1459 aa28.22■■■□□ 2.11
CDHR4-201ENST00000343366 XIRP1Q702N8 1843 aaKnown RBP28.21■■■□□ 2.11
CDHR4-201ENST00000343366 ITGAEP38570 1179 aa28.21■■■□□ 2.11
CDHR4-201ENST00000343366 CHIC2Q9UKJ5 165 aa28.21■■■□□ 2.11
CDHR4-201ENST00000343366 KIF15Q9NS87 1388 aa28.2■■■□□ 2.1
CDHR4-201ENST00000343366 ERBINQ96RT1 1412 aa28.17■■■□□ 2.1
CDHR4-201ENST00000343366 RRP7BPQ9NSQ0 103 aa28.16■■■□□ 2.1
CDHR4-201ENST00000343366 ARHGAP23Q9P227 1491 aa28.15■■■□□ 2.1
CDHR4-201ENST00000343366 CEP152O94986 1710 aa28.15■■■□□ 2.1
CDHR4-201ENST00000343366 SLIT1O75093 1534 aa28.13■■■□□ 2.09
CDHR4-201ENST00000343366 CFAP65Q6ZU64 1925 aaKnown RBP28.12■■■□□ 2.09
CDHR4-201ENST00000343366 SCAF11Q99590 1463 aaKnown RBP28.11■■■□□ 2.09
CDHR4-201ENST00000343366 PHF23Q9BUL5 403 aaPredicted RBP28.11■■■□□ 2.09
CDHR4-201ENST00000343366 TRIM26Q12899 539 aaPredicted RBP28.1■■■□□ 2.09
CDHR4-201ENST00000343366 RGS17Q9UGC6 210 aaPredicted RBP28.1■■■□□ 2.09
CDHR4-201ENST00000343366 HFM1A2PYH4 1435 aa28.08■■■□□ 2.09
CDHR4-201ENST00000343366 ANKRD50Q9ULJ7 1429 aa28.08■■■□□ 2.09
CDHR4-201ENST00000343366 ACIN1Q9UKV3 1341 aaKnown RBP28.07■■■□□ 2.08
CDHR4-201ENST00000343366 GCC2Q8IWJ2 1684 aa28.07■■■□□ 2.08
CDHR4-201ENST00000343366 PRDM15P57071 1507 aaPredicted RBP28.05■■■□□ 2.08
CDHR4-201ENST00000343366 ARHGAP31Q2M1Z3 1444 aa28.04■■■□□ 2.08
CDHR4-201ENST00000343366 LTKP29376 864 aa28.04■■■□□ 2.08
CDHR4-201ENST00000343366 NAIPQ13075 1403 aa28.01■■■□□ 2.08
CDHR4-201ENST00000343366 KDM5AP29375 1690 aaKnown RBP27.99■■■□□ 2.07
CDHR4-201ENST00000343366 PIK3C2BO00750 1634 aa27.98■■■□□ 2.07
CDHR4-201ENST00000343366 FAM135BQ49AJ0 1406 aa27.97■■■□□ 2.07
CDHR4-201ENST00000343366 SENP3Q9H4L4 574 aaPredicted RBP27.94■■■□□ 2.06
CDHR4-201ENST00000343366 KANK1Q14678 1352 aa27.94■■■□□ 2.06
CDHR4-201ENST00000343366 SETD5Q9C0A6 1442 aa27.92■■■□□ 2.06
CDHR4-201ENST00000343366 TET3O43151 1660 aa27.92■■■□□ 2.06
CDHR4-201ENST00000343366 TXNDC2Q86VQ3 553 aa27.92■■■□□ 2.06
CDHR4-201ENST00000343366 TMEM2Q9UHN6 1383 aa27.91■■■□□ 2.06
CDHR4-201ENST00000343366 UNC13BO14795 1591 aa27.9■■■□□ 2.06
CDHR4-201ENST00000343366 ROBO1Q9Y6N7 1651 aa27.89■■■□□ 2.06
CDHR4-201ENST00000343366 HRCP23327 699 aa27.88■■■□□ 2.05
CDHR4-201ENST00000343366 NWD1Q149M9 1564 aa27.86■■■□□ 2.05
CDHR4-201ENST00000343366 LMTK2Q8IWU2 1503 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms