RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 CCDC88BA6NC98 1476 aa13.35□□□□□ -0.27
CCDC18-201ENST00000343253 APPP05067 770 aa13.35□□□□□ -0.27
CCDC18-201ENST00000343253 CWC15Q9P013 229 aaKnown RBP13.35□□□□□ -0.27
CCDC18-201ENST00000343253 IPO7O95373 1038 aaKnown RBP13.35□□□□□ -0.27
CCDC18-201ENST00000343253 RASSF8Q8NHQ8 419 aa13.35□□□□□ -0.27
CCDC18-201ENST00000343253 SRPK2P78362 688 aaKnown RBP13.34□□□□□ -0.27
CCDC18-201ENST00000343253 NOL8Q76FK4 1167 aaKnown RBP13.34□□□□□ -0.27
CCDC18-201ENST00000343253 ZBED9Q6R2W3 1325 aa13.34□□□□□ -0.27
CCDC18-201ENST00000343253 VPS8Q8N3P4 1428 aa13.34□□□□□ -0.27
CCDC18-201ENST00000343253 ABCC8Q09428 1581 aa13.33□□□□□ -0.27
CCDC18-201ENST00000343253 KANK4Q5T7N3 995 aaPredicted RBP13.33□□□□□ -0.28
CCDC18-201ENST00000343253 NFKBIBQ15653 356 aa13.33□□□□□ -0.28
CCDC18-201ENST00000343253 HSP90B2PQ58FF3 399 aa13.33□□□□□ -0.28
CCDC18-201ENST00000343253 HOMER1Q86YM7 354 aa13.33□□□□□ -0.28
CCDC18-201ENST00000343253 MROH2BQ7Z745 1585 aa13.33□□□□□ -0.28
CCDC18-201ENST00000343253 CDR1P51861 262 aa13.33□□□□□ -0.28
CCDC18-201ENST00000343253 NUCB2P80303 420 aa13.33□□□□□ -0.28
CCDC18-201ENST00000343253 HMGN5P82970 282 aaKnown RBP13.33□□□□□ -0.28
CCDC18-201ENST00000343253 RRP1P56182 461 aaKnown RBP13.33□□□□□ -0.28
CCDC18-201ENST00000343253 FOXD4L5Q5VV16 416 aaPredicted RBP13.33□□□□□ -0.28
CCDC18-201ENST00000343253 FOXD4L4Q8WXT5 416 aaPredicted RBP13.33□□□□□ -0.28
CCDC18-201ENST00000343253 ISY1Q9ULR0 285 aaKnown RBP13.32□□□□□ -0.28
CCDC18-201ENST00000343253 BAZ1AQ9NRL2 1556 aaPredicted RBP13.32□□□□□ -0.28
CCDC18-201ENST00000343253 TPD52L1Q16890 204 aaPredicted RBP13.32□□□□□ -0.28
CCDC18-201ENST00000343253 HDGFL2Q7Z4V5 671 aaPredicted RBP13.32□□□□□ -0.28
CCDC18-201ENST00000343253 CREBRFQ8IUR6 639 aa13.32□□□□□ -0.28
CCDC18-201ENST00000343253 H3BQV1 296 aa13.31□□□□□ -0.28
CCDC18-201ENST00000343253 IFFO2Q5TF58 517 aa13.31□□□□□ -0.28
CCDC18-201ENST00000343253 RRP12Q5JTH9 1297 aaKnown RBP13.31□□□□□ -0.28
CCDC18-201ENST00000343253 R3HCC1Q9Y3T6 440 aaKnown RBP13.31□□□□□ -0.28
CCDC18-201ENST00000343253 REC8O95072 547 aa13.31□□□□□ -0.28
CCDC18-201ENST00000343253 MNS1Q8NEH6 495 aa13.31□□□□□ -0.28
CCDC18-201ENST00000343253 LMOD2Q6P5Q4 547 aa13.3□□□□□ -0.28
CCDC18-201ENST00000343253 PODXL2Q9NZ53 605 aa13.3□□□□□ -0.28
CCDC18-201ENST00000343253 NCBP3Q53F19 620 aaKnown RBP13.3□□□□□ -0.28
CCDC18-201ENST00000343253 CCDC39Q9UFE4 941 aa13.3□□□□□ -0.28
CCDC18-201ENST00000343253 NACADO15069 1562 aa13.3□□□□□ -0.28
CCDC18-201ENST00000343253 FAM184AQ8NB25 1140 aa13.3□□□□□ -0.28
CCDC18-201ENST00000343253 EXOC6Q8TAG9 804 aa13.3□□□□□ -0.28
CCDC18-201ENST00000343253 GORABQ5T7V8 394 aa13.29□□□□□ -0.28
CCDC18-201ENST00000343253 SPAG9O60271 1321 aaKnown RBP13.29□□□□□ -0.28
CCDC18-201ENST00000343253 LMOD3Q0VAK6 560 aa13.29□□□□□ -0.28
CCDC18-201ENST00000343253 PES1O00541 588 aaKnown RBP13.29□□□□□ -0.28
CCDC18-201ENST00000343253 AK7Q96M32 723 aa13.29□□□□□ -0.28
CCDC18-201ENST00000343253 ANO8Q9HCE9 1232 aaPredicted RBP13.28□□□□□ -0.28
CCDC18-201ENST00000343253 KANK1Q14678 1352 aa13.28□□□□□ -0.28
CCDC18-201ENST00000343253 NASPP49321 788 aaPredicted RBP13.28□□□□□ -0.28
CCDC18-201ENST00000343253 PKD2Q13563 968 aa13.28□□□□□ -0.28
CCDC18-201ENST00000343253 RAB3GAP2Q9H2M9 1393 aa13.28□□□□□ -0.28
CCDC18-201ENST00000343253 PATL2C9JE40 543 aaKnown RBP13.27□□□□□ -0.28
CCDC18-201ENST00000343253 ANKRD20A12PQ8NF67 263 aa13.27□□□□□ -0.28
CCDC18-201ENST00000343253 RUFY1Q96T51 708 aa13.27□□□□□ -0.29
CCDC18-201ENST00000343253 IFT57Q9NWB7 429 aa13.27□□□□□ -0.29
CCDC18-201ENST00000343253 MYBBP1AQ9BQG0 1328 aaKnown RBP13.27□□□□□ -0.29
CCDC18-201ENST00000343253 NGEFQ8N5V2 710 aa13.27□□□□□ -0.29
CCDC18-201ENST00000343253 BAZ1BQ9UIG0 1483 aaKnown RBP13.26□□□□□ -0.29
CCDC18-201ENST00000343253 RRP9O43818 475 aaKnown RBP13.26□□□□□ -0.29
CCDC18-201ENST00000343253 CCDC191Q8NCU4 936 aa13.26□□□□□ -0.29
CCDC18-201ENST00000343253 PRKCSHP14314 528 aaPredicted RBP13.26□□□□□ -0.29
CCDC18-201ENST00000343253 H0YHG0 523 aa13.26□□□□□ -0.29
CCDC18-201ENST00000343253 HDGFP51858 240 aaKnown RBP13.26□□□□□ -0.29
CCDC18-201ENST00000343253 KIF15Q9NS87 1388 aa13.26□□□□□ -0.29
CCDC18-201ENST00000343253 RDXP35241 583 aaKnown RBP13.25□□□□□ -0.29
CCDC18-201ENST00000343253 CPLX2Q6PUV4 134 aaKnown RBP13.25□□□□□ -0.29
CCDC18-201ENST00000343253 E9PSI1 815 aa13.25□□□□□ -0.29
CCDC18-201ENST00000343253 ZKSCAN2Q63HK3 967 aa13.25□□□□□ -0.29
CCDC18-201ENST00000343253 ANKRD45Q5TZF3 282 aa13.25□□□□□ -0.29
CCDC18-201ENST00000343253 CRBNQ96SW2 442 aa13.25□□□□□ -0.29
CCDC18-201ENST00000343253 PDE4CQ08493 712 aa13.24□□□□□ -0.29
CCDC18-201ENST00000343253 ERCC4Q92889 916 aaPredicted RBP13.24□□□□□ -0.29
CCDC18-201ENST00000343253 PRKRIP1Q9H875 184 aaPredicted RBP13.24□□□□□ -0.29
CCDC18-201ENST00000343253 DCTN1Q14203 1278 aa13.24□□□□□ -0.29
CCDC18-201ENST00000343253 MPHOSPH9Q99550 1183 aa13.24□□□□□ -0.29
CCDC18-201ENST00000343253 FOXD4L6Q3SYB3 417 aaPredicted RBP13.23□□□□□ -0.29
CCDC18-201ENST00000343253 FOXD4L3Q6VB84 417 aaPredicted RBP13.23□□□□□ -0.29
CCDC18-201ENST00000343253 AAMPQ13685 434 aa13.23□□□□□ -0.29
CCDC18-201ENST00000343253 SLC4A10Q6U841 1118 aa13.23□□□□□ -0.29
CCDC18-201ENST00000343253 SASS6Q6UVJ0 657 aa13.23□□□□□ -0.29
CCDC18-201ENST00000343253 RUFY2Q8WXA3 655 aa13.23□□□□□ -0.29
CCDC18-201ENST00000343253 HOOK1Q9UJC3 728 aaKnown RBP13.23□□□□□ -0.29
CCDC18-201ENST00000343253 ZKSCAN1P17029 563 aaPredicted RBP13.23□□□□□ -0.29
CCDC18-201ENST00000343253 BICD2Q8TD16 824 aa13.22□□□□□ -0.29
CCDC18-201ENST00000343253 EIF3AQ14152 1382 aaKnown RBP13.22□□□□□ -0.29
CCDC18-201ENST00000343253 ARHGAP35Q9NRY4 1499 aa13.22□□□□□ -0.29
CCDC18-201ENST00000343253 MBD3O95983 291 aa13.21□□□□□ -0.29
CCDC18-201ENST00000343253 BRPF3Q9ULD4 1205 aa13.21□□□□□ -0.29
CCDC18-201ENST00000343253 SOX12O15370 315 aa13.21□□□□□ -0.3
CCDC18-201ENST00000343253 CCDC173Q0VFZ6 552 aa13.21□□□□□ -0.3
CCDC18-201ENST00000343253 L3MBTL2Q969R5 705 aa13.21□□□□□ -0.3
CCDC18-201ENST00000343253 RILPL2Q969X0 211 aa13.21□□□□□ -0.3
CCDC18-201ENST00000343253 DDX19BQ9UMR2 479 aa13.21□□□□□ -0.3
CCDC18-201ENST00000343253 FMN1Q68DA7 1419 aa13.2□□□□□ -0.3
CCDC18-201ENST00000343253 TRAK2O60296 914 aa13.2□□□□□ -0.3
CCDC18-201ENST00000343253 CCDC146Q8IYE0 955 aa13.2□□□□□ -0.3
CCDC18-201ENST00000343253 PLIN1O60240 522 aa13.2□□□□□ -0.3
CCDC18-201ENST00000343253 CCDC47Q96A33 483 aaKnown RBP13.2□□□□□ -0.3
CCDC18-201ENST00000343253 COG6Q9Y2V7 657 aa13.19□□□□□ -0.3
CCDC18-201ENST00000343253 MCTP1Q6DN14 999 aa13.19□□□□□ -0.3
CCDC18-201ENST00000343253 LEKR1Q6ZMV7 388 aa13.19□□□□□ -0.3
CCDC18-201ENST00000343253 TERF2IPQ9NYB0 399 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms