RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 ABCC5O15440 1437 aa20■□□□□ 0.79
SNX18-202ENST00000343017 RGS3P49796 1198 aa20■□□□□ 0.79
SNX18-202ENST00000343017 PDE3BQ13370 1112 aa19.98■□□□□ 0.79
SNX18-202ENST00000343017 SYNJ2O15056 1496 aa19.98■□□□□ 0.79
SNX18-202ENST00000343017 ARID4BQ4LE39 1312 aaPredicted RBP19.98■□□□□ 0.79
SNX18-202ENST00000343017 CC2D1BQ5T0F9 858 aaKnown RBP19.98■□□□□ 0.79
SNX18-202ENST00000343017 C8orf34Q49A92 452 aa19.97■□□□□ 0.79
SNX18-202ENST00000343017 NLRP13Q86W25 1043 aa19.97■□□□□ 0.79
SNX18-202ENST00000343017 DISP1Q96F81 1524 aa19.96■□□□□ 0.79
SNX18-202ENST00000343017 ROCK2O75116 1388 aaKnown RBP19.96■□□□□ 0.79
SNX18-202ENST00000343017 PZPP20742 1482 aa19.96■□□□□ 0.79
SNX18-202ENST00000343017 PLB1Q6P1J6 1458 aa19.95■□□□□ 0.78
SNX18-202ENST00000343017 KDM5CP41229 1560 aa19.95■□□□□ 0.78
SNX18-202ENST00000343017 MBD5Q9P267 1494 aa19.95■□□□□ 0.78
SNX18-202ENST00000343017 MAGI1Q96QZ7 1491 aaPredicted RBP19.95■□□□□ 0.78
SNX18-202ENST00000343017 FAM161AQ3B820 660 aa19.93■□□□□ 0.78
SNX18-202ENST00000343017 KDM2BQ8NHM5 1336 aa19.93■□□□□ 0.78
SNX18-202ENST00000343017 POGKQ9P215 609 aa19.93■□□□□ 0.78
SNX18-202ENST00000343017 ROCK1Q13464 1354 aa19.93■□□□□ 0.78
SNX18-202ENST00000343017 ARXQ96QS3 562 aa19.92■□□□□ 0.78
SNX18-202ENST00000343017 FAM43AQ8N2R8 423 aa19.92■□□□□ 0.78
SNX18-202ENST00000343017 RSPH6AQ9H0K4 717 aa19.91■□□□□ 0.78
SNX18-202ENST00000343017 PRG4Q92954 1404 aaPredicted RBP19.91■□□□□ 0.78
SNX18-202ENST00000343017 CEP170Q5SW79 1584 aa19.91■□□□□ 0.78
SNX18-202ENST00000343017 CFDP1Q9UEE9 299 aaPredicted RBP19.9■□□□□ 0.78
SNX18-202ENST00000343017 CARMIL2Q6F5E8 1435 aa19.89■□□□□ 0.77
SNX18-202ENST00000343017 KTN1Q86UP2 1357 aaKnown RBP19.89■□□□□ 0.77
SNX18-202ENST00000343017 KIAA1107Q9UPP5 1409 aa19.88■□□□□ 0.77
SNX18-202ENST00000343017 KIAA0556O60303 1618 aa19.88■□□□□ 0.77
SNX18-202ENST00000343017 RRAGDQ9NQL2 400 aaPredicted RBP19.88■□□□□ 0.77
SNX18-202ENST00000343017 NUP153P49790 1475 aaKnown RBP19.87■□□□□ 0.77
SNX18-202ENST00000343017 CENPQQ7L2Z9 268 aaPredicted RBP19.87■□□□□ 0.77
SNX18-202ENST00000343017 PLEKHD1A6NEE1 506 aa19.86■□□□□ 0.77
SNX18-202ENST00000343017 PARD3Q8TEW0 1356 aa19.85■□□□□ 0.77
SNX18-202ENST00000343017 PER1O15534 1290 aaPredicted RBP19.85■□□□□ 0.77
SNX18-202ENST00000343017 KIF14Q15058 1648 aa19.84■□□□□ 0.77
SNX18-202ENST00000343017 SLKQ9H2G2 1235 aaPredicted RBP19.84■□□□□ 0.77
SNX18-202ENST00000343017 ADAMTS8Q9UP79 889 aa19.83■□□□□ 0.77
SNX18-202ENST00000343017 RALGAPBQ86X10 1494 aa19.81■□□□□ 0.76
SNX18-202ENST00000343017 NBPF1Q3BBV0 1214 aa19.81■□□□□ 0.76
SNX18-202ENST00000343017 SEC24BO95487 1268 aa19.8■□□□□ 0.76
SNX18-202ENST00000343017 DNMT1P26358 1616 aaKnown RBP19.8■□□□□ 0.76
SNX18-202ENST00000343017 PANK3Q9H999 370 aa19.79■□□□□ 0.76
SNX18-202ENST00000343017 NUP160Q12769 1436 aa19.79■□□□□ 0.76
SNX18-202ENST00000343017 RGL3Q3MIN7 710 aa19.78■□□□□ 0.76
SNX18-202ENST00000343017 NUP155O75694 1391 aa19.78■□□□□ 0.76
SNX18-202ENST00000343017 PTPRGP23470 1445 aa19.78■□□□□ 0.76
SNX18-202ENST00000343017 DUSP27Q5VZP5 1158 aa19.77■□□□□ 0.76
SNX18-202ENST00000343017 UHRF1BP1Q6BDS2 1440 aa19.77■□□□□ 0.76
SNX18-202ENST00000343017 RAPGEF6Q8TEU7 1601 aa19.76■□□□□ 0.75
SNX18-202ENST00000343017 USP19O94966 1318 aa19.76■□□□□ 0.75
SNX18-202ENST00000343017 PLEKHH1Q9ULM0 1364 aa19.75■□□□□ 0.75
SNX18-202ENST00000343017 IGHDP01880 384 aa19.74■□□□□ 0.75
SNX18-202ENST00000343017 BLMP54132 1417 aaPredicted RBP19.73■□□□□ 0.75
SNX18-202ENST00000343017 BCAR3O75815 825 aa19.72■□□□□ 0.75
SNX18-202ENST00000343017 PKNOX2Q96KN3 472 aa19.72■□□□□ 0.75
SNX18-202ENST00000343017 HNRNPMP52272 730 aaKnown RBP eCLIP19.71■□□□□ 0.75
SNX18-202ENST00000343017 SPRYD3Q8NCJ5 442 aa19.71■□□□□ 0.75
SNX18-202ENST00000343017 TROQ12816 1431 aaPredicted RBP19.71■□□□□ 0.75
SNX18-202ENST00000343017 GZF1Q9H116 711 aaPredicted RBP19.71■□□□□ 0.75
SNX18-202ENST00000343017 NAP1L5Q96NT1 182 aaPredicted RBP19.7■□□□□ 0.74
SNX18-202ENST00000343017 DISP3Q9P2K9 1392 aa19.7■□□□□ 0.74
SNX18-202ENST00000343017 SPINK5Q9NQ38 1064 aaPredicted RBP19.69■□□□□ 0.74
SNX18-202ENST00000343017 CCDC146Q8IYE0 955 aa19.69■□□□□ 0.74
SNX18-202ENST00000343017 ANKRD50Q9ULJ7 1429 aa19.69■□□□□ 0.74
SNX18-202ENST00000343017 E9PCH4 1651 aa19.69■□□□□ 0.74
SNX18-202ENST00000343017 PANK2Q9BZ23 570 aa19.68■□□□□ 0.74
SNX18-202ENST00000343017 GOLGA2Q08379 1002 aa19.68■□□□□ 0.74
SNX18-202ENST00000343017 CAMSAP2Q08AD1 1489 aa19.68■□□□□ 0.74
SNX18-202ENST00000343017 VSIG10Q8N0Z9 540 aa19.67■□□□□ 0.74
SNX18-202ENST00000343017 ZMYM4Q5VZL5 1548 aa19.67■□□□□ 0.74
SNX18-202ENST00000343017 WDR43Q15061 677 aaKnown RBP eCLIP19.66■□□□□ 0.74
SNX18-202ENST00000343017 XRCC6P12956 609 aaKnown RBP eCLIP19.66■□□□□ 0.74
SNX18-202ENST00000343017 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.66■□□□□ 0.74
SNX18-202ENST00000343017 ATP10BO94823 1461 aa19.65■□□□□ 0.74
SNX18-202ENST00000343017 ANKRD30AQ9BXX3 1397 aa19.65■□□□□ 0.74
SNX18-202ENST00000343017 TESK2Q96S53 571 aa19.64■□□□□ 0.73
SNX18-202ENST00000343017 TSPY4P0CV99 314 aa19.62■□□□□ 0.73
SNX18-202ENST00000343017 TSPY10P0CW01 314 aa19.62■□□□□ 0.73
SNX18-202ENST00000343017 SLFN5Q08AF3 891 aa19.62■□□□□ 0.73
SNX18-202ENST00000343017 L1TD1Q5T7N2 865 aaKnown RBP19.62■□□□□ 0.73
SNX18-202ENST00000343017 BECN1Q14457 450 aa19.61■□□□□ 0.73
SNX18-202ENST00000343017 GPATCH8Q9UKJ3 1502 aaKnown RBP19.61■□□□□ 0.73
SNX18-202ENST00000343017 PPP2R1AP30153 589 aa19.61■□□□□ 0.73
SNX18-202ENST00000343017 ZMYND15Q9H091 742 aa19.61■□□□□ 0.73
SNX18-202ENST00000343017 ANTXR1Q9H6X2 564 aa19.61■□□□□ 0.73
SNX18-202ENST00000343017 PNNQ9H307 717 aaKnown RBP19.6■□□□□ 0.73
SNX18-202ENST00000343017 ZNF521Q96K83 1311 aa19.6■□□□□ 0.73
SNX18-202ENST00000343017 DMRT2Q9Y5R5 561 aa19.6■□□□□ 0.73
SNX18-202ENST00000343017 PANK1Q8TE04 598 aa19.59■□□□□ 0.73
SNX18-202ENST00000343017 COG6Q9Y2V7 657 aa19.59■□□□□ 0.73
SNX18-202ENST00000343017 CHD1O14646 1710 aa19.59■□□□□ 0.73
SNX18-202ENST00000343017 ERCC6L2Q5T890 1561 aa19.59■□□□□ 0.73
SNX18-202ENST00000343017 ARHGEF12Q9NZN5 1544 aa19.58■□□□□ 0.73
SNX18-202ENST00000343017 APAF1O14727 1248 aa19.58■□□□□ 0.72
SNX18-202ENST00000343017 GOLGA6L3A6NEY3 463 aa19.57■□□□□ 0.72
SNX18-202ENST00000343017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.57■□□□□ 0.72
SNX18-202ENST00000343017 TBC1D2Q9BYX2 928 aa19.57■□□□□ 0.72
SNX18-202ENST00000343017 PLEKHH2Q8IVE3 1493 aa19.56■□□□□ 0.72
SNX18-202ENST00000343017 HSP90AA2PQ14568 343 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms