RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 ARID4BQ4LE39 1312 aaPredicted RBP11.7□□□□□ -0.54
CFAP54-201ENST00000342887 ZNF644Q9H582 1327 aaPredicted RBP11.7□□□□□ -0.54
CFAP54-201ENST00000342887 USP32Q8NFA0 1604 aa11.7□□□□□ -0.54
CFAP54-201ENST00000342887 SYNMO15061 1565 aa11.69□□□□□ -0.54
CFAP54-201ENST00000342887 A2MP01023 1474 aa11.69□□□□□ -0.54
CFAP54-201ENST00000342887 FAM50AQ14320 339 aaKnown RBP11.69□□□□□ -0.54
CFAP54-201ENST00000342887 PRAG1Q86YV5 1406 aa11.69□□□□□ -0.54
CFAP54-201ENST00000342887 JPH4Q96JJ6 628 aa11.68□□□□□ -0.54
CFAP54-201ENST00000342887 MAP3K4Q9Y6R4 1608 aa11.68□□□□□ -0.54
CFAP54-201ENST00000342887 NBPF8Q3BBV2 869 aa11.68□□□□□ -0.54
CFAP54-201ENST00000342887 SIGLEC1Q9BZZ2 1709 aa11.68□□□□□ -0.54
CFAP54-201ENST00000342887 RICTORQ6R327 1708 aa11.68□□□□□ -0.54
CFAP54-201ENST00000342887 ABCA6Q8N139 1617 aa11.67□□□□□ -0.54
CFAP54-201ENST00000342887 KCNH8Q96L42 1107 aa11.67□□□□□ -0.54
CFAP54-201ENST00000342887 ANKRD30AQ9BXX3 1397 aa11.67□□□□□ -0.54
CFAP54-201ENST00000342887 TONSLQ96HA7 1378 aa11.66□□□□□ -0.54
CFAP54-201ENST00000342887 SETBP1Q9Y6X0 1596 aa11.66□□□□□ -0.54
CFAP54-201ENST00000342887 COL17A1Q9UMD9 1497 aaPredicted RBP11.66□□□□□ -0.54
CFAP54-201ENST00000342887 C11orf95C9JLR9 678 aaPredicted RBP11.66□□□□□ -0.54
CFAP54-201ENST00000342887 HECW2Q9P2P5 1572 aa11.65□□□□□ -0.54
CFAP54-201ENST00000342887 EFCAB6Q5THR3 1501 aa11.65□□□□□ -0.54
CFAP54-201ENST00000342887 SUPT16HQ9Y5B9 1047 aaKnown RBP11.64□□□□□ -0.55
CFAP54-201ENST00000342887 LRPPRCP42704 1394 aaKnown RBP11.64□□□□□ -0.55
CFAP54-201ENST00000342887 RNF123Q5XPI4 1314 aa11.63□□□□□ -0.55
CFAP54-201ENST00000342887 MYOM2P54296 1465 aa11.63□□□□□ -0.55
CFAP54-201ENST00000342887 ADGRB3O60242 1522 aa11.63□□□□□ -0.55
CFAP54-201ENST00000342887 SCAPERQ9BY12 1400 aa11.63□□□□□ -0.55
CFAP54-201ENST00000342887 KIF1BO60333 1816 aa11.62□□□□□ -0.55
CFAP54-201ENST00000342887 SETD1AO15047 1707 aaKnown RBP11.62□□□□□ -0.55
CFAP54-201ENST00000342887 ATP7AQ04656 1500 aa11.62□□□□□ -0.55
CFAP54-201ENST00000342887 L3MBTL2Q969R5 705 aa11.61□□□□□ -0.55
CFAP54-201ENST00000342887 REREQ9P2R6 1566 aa11.6□□□□□ -0.55
CFAP54-201ENST00000342887 CLTCQ00610 1675 aaKnown RBP11.6□□□□□ -0.55
CFAP54-201ENST00000342887 GLI2P10070 1586 aa11.6□□□□□ -0.55
CFAP54-201ENST00000342887 SHPRHQ149N8 1683 aa11.6□□□□□ -0.55
CFAP54-201ENST00000342887 ARHGAP5Q13017 1502 aa11.59□□□□□ -0.55
CFAP54-201ENST00000342887 KIF15Q9NS87 1388 aa11.58□□□□□ -0.56
CFAP54-201ENST00000342887 KTN1Q86UP2 1357 aaKnown RBP11.58□□□□□ -0.56
CFAP54-201ENST00000342887 HSPA5P11021 654 aaKnown RBP11.58□□□□□ -0.56
CFAP54-201ENST00000342887 RSPH4AQ5TD94 716 aa11.57□□□□□ -0.56
CFAP54-201ENST00000342887 CAMSAP1Q5T5Y3 1602 aa11.57□□□□□ -0.56
CFAP54-201ENST00000342887 ANKRD26Q9UPS8 1709 aa11.57□□□□□ -0.56
CFAP54-201ENST00000342887 KIF7Q2M1P5 1343 aa11.56□□□□□ -0.56
CFAP54-201ENST00000342887 ADGRB1O14514 1584 aa11.55□□□□□ -0.56
CFAP54-201ENST00000342887 ARHGEF28Q8N1W1 1705 aaKnown RBP11.55□□□□□ -0.56
CFAP54-201ENST00000342887 RRP7BPQ9NSQ0 103 aa11.55□□□□□ -0.56
CFAP54-201ENST00000342887 CDK11AQ9UQ88 783 aaPredicted RBP11.55□□□□□ -0.56
CFAP54-201ENST00000342887 FANCAO15360 1455 aa11.54□□□□□ -0.56
CFAP54-201ENST00000342887 TRAPPC8Q9Y2L5 1435 aa11.54□□□□□ -0.56
CFAP54-201ENST00000342887 ITGAEP38570 1179 aa11.54□□□□□ -0.56
CFAP54-201ENST00000342887 KDM5AP29375 1690 aaKnown RBP11.54□□□□□ -0.56
CFAP54-201ENST00000342887 BLMP54132 1417 aaPredicted RBP11.54□□□□□ -0.56
CFAP54-201ENST00000342887 PARD3Q8TEW0 1356 aa11.53□□□□□ -0.56
CFAP54-201ENST00000342887 VIRMAQ69YN4 1812 aaKnown RBP11.53□□□□□ -0.56
CFAP54-201ENST00000342887 ROCK2O75116 1388 aaKnown RBP11.52□□□□□ -0.57
CFAP54-201ENST00000342887 MLH3Q9UHC1 1453 aa11.51□□□□□ -0.57
CFAP54-201ENST00000342887 SMG6Q86US8 1419 aaKnown RBP11.51□□□□□ -0.57
CFAP54-201ENST00000342887 CHMP7Q8WUX9 453 aaPredicted RBP11.51□□□□□ -0.57
CFAP54-201ENST00000342887 USP47Q96K76 1375 aa11.51□□□□□ -0.57
CFAP54-201ENST00000342887 DIP2CQ9Y2E4 1556 aa11.51□□□□□ -0.57
CFAP54-201ENST00000342887 PRKRIP1Q9H875 184 aaPredicted RBP11.5□□□□□ -0.57
CFAP54-201ENST00000342887 CFDP1Q9UEE9 299 aaPredicted RBP11.49□□□□□ -0.57
CFAP54-201ENST00000342887 DDX10Q13206 875 aaKnown RBP11.48□□□□□ -0.57
CFAP54-201ENST00000342887 ABCC3O15438 1527 aa11.48□□□□□ -0.57
CFAP54-201ENST00000342887 QRICH2Q9H0J4 1663 aa11.48□□□□□ -0.57
CFAP54-201ENST00000342887 UGGT1Q9NYU2 1555 aa11.48□□□□□ -0.57
CFAP54-201ENST00000342887 MYO5BQ9ULV0 1848 aa11.47□□□□□ -0.57
CFAP54-201ENST00000342887 ZBED9Q6R2W3 1325 aa11.46□□□□□ -0.57
CFAP54-201ENST00000342887 ERICH6BQ5W0A0 696 aa11.46□□□□□ -0.57
CFAP54-201ENST00000342887 EIF4G2P78344 907 aaKnown RBP eCLIP11.46□□□□□ -0.57
CFAP54-201ENST00000342887 PREX1Q8TCU6 1659 aa11.46□□□□□ -0.58
CFAP54-201ENST00000342887 NEXMIFQ5QGS0 1516 aa11.45□□□□□ -0.58
CFAP54-201ENST00000342887 CCDC184Q52MB2 194 aa11.45□□□□□ -0.58
CFAP54-201ENST00000342887 NPC1L1Q9UHC9 1359 aa11.45□□□□□ -0.58
CFAP54-201ENST00000342887 PER1O15534 1290 aaPredicted RBP11.45□□□□□ -0.58
CFAP54-201ENST00000342887 NUP155O75694 1391 aa11.44□□□□□ -0.58
CFAP54-201ENST00000342887 TESK2Q96S53 571 aa11.44□□□□□ -0.58
CFAP54-201ENST00000342887 TMEM131LA2VDJ0 1609 aa11.44□□□□□ -0.58
CFAP54-201ENST00000342887 KNDC1Q76NI1 1749 aa11.43□□□□□ -0.58
CFAP54-201ENST00000342887 CHIC2Q9UKJ5 165 aa11.43□□□□□ -0.58
CFAP54-201ENST00000342887 RIMBP3CA6NJZ7 1639 aa11.43□□□□□ -0.58
CFAP54-201ENST00000342887 RIMBP3BA6NNM3 1639 aa11.43□□□□□ -0.58
CFAP54-201ENST00000342887 RIMBP3Q9UFD9 1639 aa11.43□□□□□ -0.58
CFAP54-201ENST00000342887 SBNO2Q9Y2G9 1366 aa11.43□□□□□ -0.58
CFAP54-201ENST00000342887 FOXD1Q16676 465 aa11.43□□□□□ -0.58
CFAP54-201ENST00000342887 POGZQ7Z3K3 1410 aa11.43□□□□□ -0.58
CFAP54-201ENST00000342887 ASXL1Q8IXJ9 1541 aa11.43□□□□□ -0.58
CFAP54-201ENST00000342887 TSHZ2Q9NRE2 1034 aa11.42□□□□□ -0.58
CFAP54-201ENST00000342887 ARHGAP31Q2M1Z3 1444 aa11.41□□□□□ -0.58
CFAP54-201ENST00000342887 NEO1Q92859 1461 aa11.41□□□□□ -0.58
CFAP54-201ENST00000342887 NOS1P29475 1434 aa11.41□□□□□ -0.58
CFAP54-201ENST00000342887 ADGRB2O60241 1585 aa11.41□□□□□ -0.58
CFAP54-201ENST00000342887 PLEKHD1A6NEE1 506 aa11.41□□□□□ -0.58
CFAP54-201ENST00000342887 BRD4O60885 1362 aaPredicted RBP11.4□□□□□ -0.58
CFAP54-201ENST00000342887 WASHC2CQ9Y4E1 1318 aa11.4□□□□□ -0.58
CFAP54-201ENST00000342887 CCDC144AA2RUR9 1427 aa11.4□□□□□ -0.59
CFAP54-201ENST00000342887 PKD2Q13563 968 aa11.39□□□□□ -0.59
CFAP54-201ENST00000342887 KIF13AQ9H1H9 1805 aa11.39□□□□□ -0.59
CFAP54-201ENST00000342887 ERVK-7P63135 1459 aa11.39□□□□□ -0.59
CFAP54-201ENST00000342887 ANP32EQ9BTT0 268 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms