RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 RSPH4AQ5TD94 716 aa18.94■□□□□ 0.62
COL11A2-201ENST00000341947 KIF3AQ9Y496 699 aa18.94■□□□□ 0.62
COL11A2-201ENST00000341947 TDRD9Q8NDG6 1382 aaKnown RBP18.94■□□□□ 0.62
COL11A2-201ENST00000341947 A0A0U1RQG5 324 aaPredicted RBP18.94■□□□□ 0.62
COL11A2-201ENST00000341947 NOL8Q76FK4 1167 aaKnown RBP18.94■□□□□ 0.62
COL11A2-201ENST00000341947 CREBRFQ8IUR6 639 aa18.93■□□□□ 0.62
COL11A2-201ENST00000341947 KIF16BQ96L93 1317 aa18.93■□□□□ 0.62
COL11A2-201ENST00000341947 CLUAP1Q96AJ1 413 aa18.93■□□□□ 0.62
COL11A2-201ENST00000341947 CECR2Q9BXF3 1484 aa18.93■□□□□ 0.62
COL11A2-201ENST00000341947 PDE4CQ08493 712 aa18.93■□□□□ 0.62
COL11A2-201ENST00000341947 CEP89Q96ST8 783 aa18.92■□□□□ 0.62
COL11A2-201ENST00000341947 NUTM2FA1L443 756 aa18.92■□□□□ 0.62
COL11A2-201ENST00000341947 RBM19Q9Y4C8 960 aaKnown RBP18.92■□□□□ 0.62
COL11A2-201ENST00000341947 ST18O60284 1047 aa18.9■□□□□ 0.62
COL11A2-201ENST00000341947 C1orf141Q5JVX7 400 aa18.9■□□□□ 0.62
COL11A2-201ENST00000341947 NLRP13Q86W25 1043 aa18.89■□□□□ 0.62
COL11A2-201ENST00000341947 CCDC18Q5T9S5 1454 aa18.89■□□□□ 0.61
COL11A2-201ENST00000341947 PHLDB1Q86UU1 1377 aa18.89■□□□□ 0.61
COL11A2-201ENST00000341947 SF3A1Q15459 793 aaKnown RBP18.88■□□□□ 0.61
COL11A2-201ENST00000341947 GOLGA6L1Q8N7Z2 621 aa18.88■□□□□ 0.61
COL11A2-201ENST00000341947 SMARCA2P51531 1590 aa18.88■□□□□ 0.61
COL11A2-201ENST00000341947 GOLGA6L3A6NEY3 463 aa18.88■□□□□ 0.61
COL11A2-201ENST00000341947 TRAK1Q9UPV9 953 aa18.88■□□□□ 0.61
COL11A2-201ENST00000341947 TPM3P06753 285 aa18.87■□□□□ 0.61
COL11A2-201ENST00000341947 PDE3BQ13370 1112 aa18.87■□□□□ 0.61
COL11A2-201ENST00000341947 AMER1Q5JTC6 1135 aaPredicted RBP18.87■□□□□ 0.61
COL11A2-201ENST00000341947 PHF14O94880 888 aa18.87■□□□□ 0.61
COL11A2-201ENST00000341947 EVA1CP58658 441 aa18.87■□□□□ 0.61
COL11A2-201ENST00000341947 FOXD4L1Q9NU39 408 aa18.87■□□□□ 0.61
COL11A2-201ENST00000341947 CCDC88BA6NC98 1476 aa18.85■□□□□ 0.61
COL11A2-201ENST00000341947 COG3Q96JB2 828 aa18.85■□□□□ 0.61
COL11A2-201ENST00000341947 UACAQ9BZF9 1416 aa18.85■□□□□ 0.61
COL11A2-201ENST00000341947 L3MBTL2Q969R5 705 aa18.84■□□□□ 0.61
COL11A2-201ENST00000341947 CHMP4CQ96CF2 233 aa18.84■□□□□ 0.61
COL11A2-201ENST00000341947 H3BQV1 296 aa18.84■□□□□ 0.61
COL11A2-201ENST00000341947 IFFO2Q5TF58 517 aa18.84■□□□□ 0.61
COL11A2-201ENST00000341947 USP35Q9P2H5 1018 aa18.83■□□□□ 0.61
COL11A2-201ENST00000341947 ABCC8Q09428 1581 aa18.83■□□□□ 0.61
COL11A2-201ENST00000341947 AKAP17AQ02040 695 aaKnown RBP18.83■□□□□ 0.6
COL11A2-201ENST00000341947 MSH5O43196 834 aa18.83■□□□□ 0.6
COL11A2-201ENST00000341947 KIF15Q9NS87 1388 aa18.83■□□□□ 0.6
COL11A2-201ENST00000341947 TPD52L1Q16890 204 aaPredicted RBP18.82■□□□□ 0.6
COL11A2-201ENST00000341947 NOL10Q9BSC4 688 aaKnown RBP18.82■□□□□ 0.6
COL11A2-201ENST00000341947 AMOTL1Q8IY63 956 aa18.81■□□□□ 0.6
COL11A2-201ENST00000341947 RILPL2Q969X0 211 aa18.81■□□□□ 0.6
COL11A2-201ENST00000341947 TTC5Q8N0Z6 440 aa18.8■□□□□ 0.6
COL11A2-201ENST00000341947 RRP7AQ9Y3A4 280 aaKnown RBP18.8■□□□□ 0.6
COL11A2-201ENST00000341947 PES1O00541 588 aaKnown RBP18.8■□□□□ 0.6
COL11A2-201ENST00000341947 FAM184AQ8NB25 1140 aa18.8■□□□□ 0.6
COL11A2-201ENST00000341947 TRIM34Q9BYJ4 488 aa18.8■□□□□ 0.6
COL11A2-201ENST00000341947 ARID3AQ99856 593 aa18.8■□□□□ 0.6
COL11A2-201ENST00000341947 CCDC144AA2RUR9 1427 aa18.8■□□□□ 0.6
COL11A2-201ENST00000341947 SYNE3Q6ZMZ3 975 aa18.79■□□□□ 0.6
COL11A2-201ENST00000341947 LRRFIP1Q32MZ4 808 aaKnown RBP18.79■□□□□ 0.6
COL11A2-201ENST00000341947 TEFQ10587 303 aa18.79■□□□□ 0.6
COL11A2-201ENST00000341947 CGNL1Q0VF96 1302 aa18.78■□□□□ 0.6
COL11A2-201ENST00000341947 EVC2Q86UK5 1308 aa18.78■□□□□ 0.6
COL11A2-201ENST00000341947 FHOD3Q2V2M9 1422 aa18.78■□□□□ 0.6
COL11A2-201ENST00000341947 FOXD4L5Q5VV16 416 aaPredicted RBP18.78■□□□□ 0.6
COL11A2-201ENST00000341947 FOXD4L4Q8WXT5 416 aaPredicted RBP18.78■□□□□ 0.6
COL11A2-201ENST00000341947 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.78■□□□□ 0.6
COL11A2-201ENST00000341947 MYBBP1AQ9BQG0 1328 aaKnown RBP18.78■□□□□ 0.6
COL11A2-201ENST00000341947 TPM2P07951 284 aa18.78■□□□□ 0.6
COL11A2-201ENST00000341947 NEXNQ0ZGT2 675 aa18.78■□□□□ 0.6
COL11A2-201ENST00000341947 TCEAL9Q9UHQ7 104 aa18.78■□□□□ 0.6
COL11A2-201ENST00000341947 CTDP1Q9Y5B0 961 aaPredicted RBP18.78■□□□□ 0.6
COL11A2-201ENST00000341947 TSR1Q2NL82 804 aaKnown RBP18.77■□□□□ 0.6
COL11A2-201ENST00000341947 VGFO15240 615 aaPredicted RBP18.77■□□□□ 0.6
COL11A2-201ENST00000341947 RAPGEF2Q9Y4G8 1499 aa18.77■□□□□ 0.59
COL11A2-201ENST00000341947 IPO9Q96P70 1041 aaKnown RBP18.75■□□□□ 0.59
COL11A2-201ENST00000341947 PANK3Q9H999 370 aa18.75■□□□□ 0.59
COL11A2-201ENST00000341947 ELL2O00472 640 aaPredicted RBP18.75■□□□□ 0.59
COL11A2-201ENST00000341947 ANKRD45Q5TZF3 282 aa18.75■□□□□ 0.59
COL11A2-201ENST00000341947 DIAPH3Q9NSV4 1193 aa18.74■□□□□ 0.59
COL11A2-201ENST00000341947 DDX11L8A8MPP1 907 aa18.74■□□□□ 0.59
COL11A2-201ENST00000341947 ATP6V1DQ9Y5K8 247 aa18.74■□□□□ 0.59
COL11A2-201ENST00000341947 RAD21O60216 631 aa18.73■□□□□ 0.59
COL11A2-201ENST00000341947 MEX3CQ5U5Q3 659 aaKnown RBP18.73■□□□□ 0.59
COL11A2-201ENST00000341947 JPH4Q96JJ6 628 aa18.73■□□□□ 0.59
COL11A2-201ENST00000341947 ZKSCAN2Q63HK3 967 aa18.73■□□□□ 0.59
COL11A2-201ENST00000341947 NGEFQ8N5V2 710 aa18.73■□□□□ 0.59
COL11A2-201ENST00000341947 TNNT3P45378 269 aaPredicted RBP18.72■□□□□ 0.59
COL11A2-201ENST00000341947 CPLX2Q6PUV4 134 aaKnown RBP18.72■□□□□ 0.59
COL11A2-201ENST00000341947 C9orf78Q9NZ63 289 aaPredicted RBP18.72■□□□□ 0.59
COL11A2-201ENST00000341947 TPM1P09493 284 aa18.72■□□□□ 0.59
COL11A2-201ENST00000341947 E9PSI1 815 aa18.71■□□□□ 0.59
COL11A2-201ENST00000341947 EIF2S2P20042 333 aaKnown RBP18.71■□□□□ 0.59
COL11A2-201ENST00000341947 TRIM29Q14134 588 aa18.71■□□□□ 0.59
COL11A2-201ENST00000341947 RUFY2Q8WXA3 655 aa18.71■□□□□ 0.59
COL11A2-201ENST00000341947 GOLGA6L19H0YKK7 550 aa18.7■□□□□ 0.58
COL11A2-201ENST00000341947 CENPQQ7L2Z9 268 aaPredicted RBP18.7■□□□□ 0.58
COL11A2-201ENST00000341947 ST20-MTHFSA0A0A6YYL1 179 aa18.7■□□□□ 0.58
COL11A2-201ENST00000341947 MINK1Q8N4C8 1332 aaPredicted RBP18.69■□□□□ 0.58
COL11A2-201ENST00000341947 MCTP1Q6DN14 999 aa18.69■□□□□ 0.58
COL11A2-201ENST00000341947 BCL2L13Q9BXK5 485 aa18.69■□□□□ 0.58
COL11A2-201ENST00000341947 ANO8Q9HCE9 1232 aaPredicted RBP18.69■□□□□ 0.58
COL11A2-201ENST00000341947 MROH2BQ7Z745 1585 aa18.69■□□□□ 0.58
COL11A2-201ENST00000341947 VPS37DQ86XT2 251 aa18.69■□□□□ 0.58
COL11A2-201ENST00000341947 BECN2A8MW95 431 aa18.68■□□□□ 0.58
COL11A2-201ENST00000341947 CCDC47Q96A33 483 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms