RNA–Protein interactions for RNA: ENST00000341866.3

LINC01164-201, Transcript of long intergenic non-protein coding RNA 1164, humanhuman

TSL 2 BASIC

Gene LINC01164, Length 3,384 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01164-201ENST00000341866 NEFLP07196 543 aa17.39■□□□□ 0.37
LINC01164-201ENST00000341866 KIDINS220Q9ULH0 1771 aa17.39■□□□□ 0.37
LINC01164-201ENST00000341866 NEO1Q92859 1461 aa17.38■□□□□ 0.37
LINC01164-201ENST00000341866 HNRNPUQ00839 825 aaKnown RBP eCLIP17.38■□□□□ 0.37
LINC01164-201ENST00000341866 SLC4A1APQ9BWU0 796 aaKnown RBP17.37■□□□□ 0.37
LINC01164-201ENST00000341866 RICTORQ6R327 1708 aa17.37■□□□□ 0.37
LINC01164-201ENST00000341866 TRAPPC8Q9Y2L5 1435 aa17.37■□□□□ 0.37
LINC01164-201ENST00000341866 ANKRD50Q9ULJ7 1429 aa17.37■□□□□ 0.37
LINC01164-201ENST00000341866 HSPA5P11021 654 aaKnown RBP17.35■□□□□ 0.37
LINC01164-201ENST00000341866 MPHOSPH9Q99550 1183 aa17.35■□□□□ 0.37
LINC01164-201ENST00000341866 FAM9BQ8IZU0 186 aa17.34■□□□□ 0.37
LINC01164-201ENST00000341866 L3MBTL2Q969R5 705 aa17.34■□□□□ 0.37
LINC01164-201ENST00000341866 KIF13AQ9H1H9 1805 aa17.34■□□□□ 0.37
LINC01164-201ENST00000341866 MROH1Q8NDA8 1641 aa17.34■□□□□ 0.37
LINC01164-201ENST00000341866 ATP7AQ04656 1500 aa17.34■□□□□ 0.37
LINC01164-201ENST00000341866 DEKP35659 375 aaKnown RBP17.33■□□□□ 0.37
LINC01164-201ENST00000341866 RNF17Q9BXT8 1623 aaKnown RBP17.33■□□□□ 0.36
LINC01164-201ENST00000341866 FRMPD1Q5SYB0 1578 aa17.33■□□□□ 0.36
LINC01164-201ENST00000341866 ANKRD30BQ9BXX2 1392 aa17.33■□□□□ 0.36
LINC01164-201ENST00000341866 EFCAB2Q5VUJ9 269 aa17.32■□□□□ 0.36
LINC01164-201ENST00000341866 KIF15Q9NS87 1388 aa17.32■□□□□ 0.36
LINC01164-201ENST00000341866 MLH3Q9UHC1 1453 aa17.31■□□□□ 0.36
LINC01164-201ENST00000341866 ATP10AO60312 1499 aa17.31■□□□□ 0.36
LINC01164-201ENST00000341866 HNRNPMP52272 730 aaKnown RBP eCLIP17.3■□□□□ 0.36
LINC01164-201ENST00000341866 KDM2AQ9Y2K7 1162 aa17.3■□□□□ 0.36
LINC01164-201ENST00000341866 ZMYM4Q5VZL5 1548 aa17.3■□□□□ 0.36
LINC01164-201ENST00000341866 ADGRL1O94910 1474 aa17.3■□□□□ 0.36
LINC01164-201ENST00000341866 POGZQ7Z3K3 1410 aa17.3■□□□□ 0.36
LINC01164-201ENST00000341866 PRDM15P57071 1507 aaPredicted RBP17.3■□□□□ 0.36
LINC01164-201ENST00000341866 RPRD2Q5VT52 1461 aaKnown RBP17.29■□□□□ 0.36
LINC01164-201ENST00000341866 FAM135AQ9P2D6 1515 aa17.29■□□□□ 0.36
LINC01164-201ENST00000341866 ZNF518AQ6AHZ1 1483 aa17.29■□□□□ 0.36
LINC01164-201ENST00000341866 CD109Q6YHK3 1445 aa17.28■□□□□ 0.36
LINC01164-201ENST00000341866 HECW2Q9P2P5 1572 aa17.28■□□□□ 0.36
LINC01164-201ENST00000341866 EIF4G2P78344 907 aaKnown RBP eCLIP17.28■□□□□ 0.36
LINC01164-201ENST00000341866 TEX14Q8IWB6 1497 aa17.26■□□□□ 0.35
LINC01164-201ENST00000341866 NEURL4Q96JN8 1562 aa17.26■□□□□ 0.35
LINC01164-201ENST00000341866 LMTK2Q8IWU2 1503 aa17.25■□□□□ 0.35
LINC01164-201ENST00000341866 REREQ9P2R6 1566 aa17.25■□□□□ 0.35
LINC01164-201ENST00000341866 ABCA6Q8N139 1617 aa17.24■□□□□ 0.35
LINC01164-201ENST00000341866 CCDC184Q52MB2 194 aa17.23■□□□□ 0.35
LINC01164-201ENST00000341866 TET3O43151 1660 aa17.23■□□□□ 0.35
LINC01164-201ENST00000341866 TSPY4P0CV99 314 aa17.22■□□□□ 0.35
LINC01164-201ENST00000341866 TSPY10P0CW01 314 aa17.22■□□□□ 0.35
LINC01164-201ENST00000341866 SCAPERQ9BY12 1400 aa17.22■□□□□ 0.35
LINC01164-201ENST00000341866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.21■□□□□ 0.35
LINC01164-201ENST00000341866 SALL2Q9Y467 1007 aaPredicted RBP17.21■□□□□ 0.35
LINC01164-201ENST00000341866 E9PCH4 1651 aa17.21■□□□□ 0.35
LINC01164-201ENST00000341866 C11orf95C9JLR9 678 aaPredicted RBP17.2■□□□□ 0.34
LINC01164-201ENST00000341866 CCDC136Q96JN2 1154 aa17.2■□□□□ 0.34
LINC01164-201ENST00000341866 DIP2CQ9Y2E4 1556 aa17.2■□□□□ 0.34
LINC01164-201ENST00000341866 WASHC2AQ641Q2 1341 aa17.19■□□□□ 0.34
LINC01164-201ENST00000341866 MRS2Q9HD23 443 aa17.19■□□□□ 0.34
LINC01164-201ENST00000341866 FANCIQ9NVI1 1328 aa17.19■□□□□ 0.34
LINC01164-201ENST00000341866 NPM1P06748 294 aaKnown RBP eCLIP17.19■□□□□ 0.34
LINC01164-201ENST00000341866 NBPF8Q3BBV2 869 aa17.19■□□□□ 0.34
LINC01164-201ENST00000341866 PLA2R1Q13018 1463 aa17.18■□□□□ 0.34
LINC01164-201ENST00000341866 DHX29Q7Z478 1369 aaKnown RBP17.16■□□□□ 0.34
LINC01164-201ENST00000341866 PKD2Q13563 968 aa17.16■□□□□ 0.34
LINC01164-201ENST00000341866 RGL3Q3MIN7 710 aa17.16■□□□□ 0.34
LINC01164-201ENST00000341866 NBR1Q14596 966 aa17.15■□□□□ 0.34
LINC01164-201ENST00000341866 PTPRTO14522 1441 aa17.15■□□□□ 0.34
LINC01164-201ENST00000341866 ZC3H13Q5T200 1668 aaKnown RBP17.14■□□□□ 0.34
LINC01164-201ENST00000341866 SPHKAPQ2M3C7 1700 aa17.14■□□□□ 0.33
LINC01164-201ENST00000341866 CEP152O94986 1710 aa17.14■□□□□ 0.33
LINC01164-201ENST00000341866 MYT1LQ9UL68 1186 aa17.13■□□□□ 0.33
LINC01164-201ENST00000341866 TRPM2O94759 1503 aa17.13■□□□□ 0.33
LINC01164-201ENST00000341866 UHRF1BP1Q6BDS2 1440 aa17.13■□□□□ 0.33
LINC01164-201ENST00000341866 CCER2I3L3R5 266 aa17.11■□□□□ 0.33
LINC01164-201ENST00000341866 EFCAB6Q5THR3 1501 aa17.11■□□□□ 0.33
LINC01164-201ENST00000341866 SPAG9O60271 1321 aaKnown RBP17.11■□□□□ 0.33
LINC01164-201ENST00000341866 A2MP01023 1474 aa17.1■□□□□ 0.33
LINC01164-201ENST00000341866 CYB5RLQ6IPT4 315 aa17.1■□□□□ 0.33
LINC01164-201ENST00000341866 AFAP1Q8N556 730 aa17.1■□□□□ 0.33
LINC01164-201ENST00000341866 NUP155O75694 1391 aa17.09■□□□□ 0.33
LINC01164-201ENST00000341866 POLR1AO95602 1720 aaPredicted RBP17.09■□□□□ 0.33
LINC01164-201ENST00000341866 AGLP35573 1532 aa17.08■□□□□ 0.33
LINC01164-201ENST00000341866 LAMC1P11047 1609 aa17.08■□□□□ 0.33
LINC01164-201ENST00000341866 SIGLEC1Q9BZZ2 1709 aa17.07■□□□□ 0.32
LINC01164-201ENST00000341866 IFT172Q9UG01 1749 aa17.07■□□□□ 0.32
LINC01164-201ENST00000341866 RTN4Q9NQC3 1192 aaKnown RBP17.07■□□□□ 0.32
LINC01164-201ENST00000341866 PIK3C2BO00750 1634 aa17.05■□□□□ 0.32
LINC01164-201ENST00000341866 DCAF11Q8TEB1 546 aa17.05■□□□□ 0.32
LINC01164-201ENST00000341866 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.05■□□□□ 0.32
LINC01164-201ENST00000341866 CAMSAP1Q5T5Y3 1602 aa17.03■□□□□ 0.32
LINC01164-201ENST00000341866 CLTCL1P53675 1640 aa17.03■□□□□ 0.32
LINC01164-201ENST00000341866 ARHGEF40Q8TER5 1519 aa17.02■□□□□ 0.32
LINC01164-201ENST00000341866 ABCC3O15438 1527 aa17.02■□□□□ 0.31
LINC01164-201ENST00000341866 TRPM1Q7Z4N2 1603 aa17.02■□□□□ 0.31
LINC01164-201ENST00000341866 CARD11Q9BXL7 1154 aa17.02■□□□□ 0.31
LINC01164-201ENST00000341866 SPATA31E1Q6ZUB1 1445 aa17.01■□□□□ 0.31
LINC01164-201ENST00000341866 PRKRIP1Q9H875 184 aaPredicted RBP17.01■□□□□ 0.31
LINC01164-201ENST00000341866 TSPOAP1O95153 1857 aa17■□□□□ 0.31
LINC01164-201ENST00000341866 ARHGAP31Q2M1Z3 1444 aa17■□□□□ 0.31
LINC01164-201ENST00000341866 KIF7Q2M1P5 1343 aa17■□□□□ 0.31
LINC01164-201ENST00000341866 IL27Q8NEV9 243 aa16.98■□□□□ 0.31
LINC01164-201ENST00000341866 B4GALNT3Q6L9W6 998 aa16.98■□□□□ 0.31
LINC01164-201ENST00000341866 KIAA1210Q9ULL0 1709 aa16.98■□□□□ 0.31
LINC01164-201ENST00000341866 RALGAPBQ86X10 1494 aa16.97■□□□□ 0.31
LINC01164-201ENST00000341866 COL17A1Q9UMD9 1497 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms