RNA–Protein interactions for RNA: ENST00000340871.8

NVL-202, Transcript of nuclear VCP-like, humanhuman

TSL 2 BASIC

Gene NVL, Length 2,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-202ENST00000340871 PCGF6Q9BYE7 350 aa12.81□□□□□ -0.36
NVL-202ENST00000340871 ATP7AQ04656 1500 aa12.81□□□□□ -0.36
NVL-202ENST00000340871 SPAG9O60271 1321 aaKnown RBP12.8□□□□□ -0.36
NVL-202ENST00000340871 NAIPQ13075 1403 aa12.79□□□□□ -0.36
NVL-202ENST00000340871 KIDINS220Q9ULH0 1771 aa12.79□□□□□ -0.36
NVL-202ENST00000340871 DUOX2Q9NRD8 1548 aa12.79□□□□□ -0.36
NVL-202ENST00000340871 TMEM132AQ24JP5 1023 aa12.79□□□□□ -0.36
NVL-202ENST00000340871 SETD5Q9C0A6 1442 aa12.79□□□□□ -0.36
NVL-202ENST00000340871 AFAP1Q8N556 730 aa12.77□□□□□ -0.37
NVL-202ENST00000340871 REREQ9P2R6 1566 aa12.77□□□□□ -0.37
NVL-202ENST00000340871 ITGAEP38570 1179 aa12.77□□□□□ -0.37
NVL-202ENST00000340871 ERBINQ96RT1 1412 aa12.76□□□□□ -0.37
NVL-202ENST00000340871 COL17A1Q9UMD9 1497 aaPredicted RBP12.76□□□□□ -0.37
NVL-202ENST00000340871 PDE4CQ08493 712 aa12.76□□□□□ -0.37
NVL-202ENST00000340871 KDM6BO15054 1643 aa12.76□□□□□ -0.37
NVL-202ENST00000340871 EIF2AK4Q9P2K8 1649 aaKnown RBP12.76□□□□□ -0.37
NVL-202ENST00000340871 KIF15Q9NS87 1388 aa12.75□□□□□ -0.37
NVL-202ENST00000340871 BCORL1Q5H9F3 1711 aa12.75□□□□□ -0.37
NVL-202ENST00000340871 DIP2CQ9Y2E4 1556 aa12.74□□□□□ -0.37
NVL-202ENST00000340871 ABCA6Q8N139 1617 aa12.74□□□□□ -0.37
NVL-202ENST00000340871 ARHGEF40Q8TER5 1519 aa12.73□□□□□ -0.37
NVL-202ENST00000340871 CHIC2Q9UKJ5 165 aa12.73□□□□□ -0.37
NVL-202ENST00000340871 ANKRD50Q9ULJ7 1429 aa12.73□□□□□ -0.37
NVL-202ENST00000340871 RAPGEF3O95398 923 aa12.73□□□□□ -0.37
NVL-202ENST00000340871 DHX29Q7Z478 1369 aaKnown RBP12.72□□□□□ -0.37
NVL-202ENST00000340871 CHMP4AQ9BY43 222 aa12.72□□□□□ -0.37
NVL-202ENST00000340871 A2MP01023 1474 aa12.72□□□□□ -0.37
NVL-202ENST00000340871 RAB3GAP2Q9H2M9 1393 aa12.71□□□□□ -0.37
NVL-202ENST00000340871 PKNOX2Q96KN3 472 aa12.71□□□□□ -0.37
NVL-202ENST00000340871 ATP10AO60312 1499 aa12.71□□□□□ -0.37
NVL-202ENST00000340871 RRP7BPQ9NSQ0 103 aa12.71□□□□□ -0.38
NVL-202ENST00000340871 AGLP35573 1532 aa12.7□□□□□ -0.38
NVL-202ENST00000340871 KDM5DQ9BY66 1539 aa12.7□□□□□ -0.38
NVL-202ENST00000340871 UNC13BO14795 1591 aa12.7□□□□□ -0.38
NVL-202ENST00000340871 DEPDC5O75140 1603 aa12.69□□□□□ -0.38
NVL-202ENST00000340871 HAP1P54257 671 aaPredicted RBP12.68□□□□□ -0.38
NVL-202ENST00000340871 RNF17Q9BXT8 1623 aaKnown RBP12.68□□□□□ -0.38
NVL-202ENST00000340871 YEATS2Q9ULM3 1422 aa12.68□□□□□ -0.38
NVL-202ENST00000340871 FAM135AQ9P2D6 1515 aa12.67□□□□□ -0.38
NVL-202ENST00000340871 NEFLP07196 543 aa12.67□□□□□ -0.38
NVL-202ENST00000340871 PRDM15P57071 1507 aaPredicted RBP12.65□□□□□ -0.38
NVL-202ENST00000340871 MYT1LQ9UL68 1186 aa12.65□□□□□ -0.38
NVL-202ENST00000340871 VWDEQ8N2E2 1590 aa12.65□□□□□ -0.39
NVL-202ENST00000340871 IQGAP3Q86VI3 1631 aa12.64□□□□□ -0.39
NVL-202ENST00000340871 CENPBP07199 599 aaPredicted RBP12.63□□□□□ -0.39
NVL-202ENST00000340871 MROH1Q8NDA8 1641 aa12.63□□□□□ -0.39
NVL-202ENST00000340871 LMTK2Q8IWU2 1503 aa12.62□□□□□ -0.39
NVL-202ENST00000340871 PPP6R1Q9UPN7 881 aa12.62□□□□□ -0.39
NVL-202ENST00000340871 SAMD1Q6SPF0 538 aaPredicted RBP12.61□□□□□ -0.39
NVL-202ENST00000340871 ZC3H13Q5T200 1668 aaKnown RBP12.61□□□□□ -0.39
NVL-202ENST00000340871 CLSPNQ9HAW4 1339 aa12.6□□□□□ -0.39
NVL-202ENST00000340871 PZPP20742 1482 aa12.6□□□□□ -0.39
NVL-202ENST00000340871 KANK1Q14678 1352 aa12.59□□□□□ -0.39
NVL-202ENST00000340871 DHX57Q6P158 1386 aaKnown RBP12.59□□□□□ -0.39
NVL-202ENST00000340871 SCAF1Q9H7N4 1312 aaKnown RBP12.59□□□□□ -0.39
NVL-202ENST00000340871 TAF7LQ5H9L4 462 aa12.59□□□□□ -0.39
NVL-202ENST00000340871 NUP155O75694 1391 aa12.58□□□□□ -0.4
NVL-202ENST00000340871 KIF3BO15066 747 aa12.58□□□□□ -0.4
NVL-202ENST00000340871 SIGLEC1Q9BZZ2 1709 aa12.58□□□□□ -0.4
NVL-202ENST00000340871 TET3O43151 1660 aa12.57□□□□□ -0.4
NVL-202ENST00000340871 BRD2P25440 801 aaKnown RBP12.56□□□□□ -0.4
NVL-202ENST00000340871 DHX37Q8IY37 1157 aaKnown RBP12.56□□□□□ -0.4
NVL-202ENST00000340871 TRIM52Q96A61 297 aa12.56□□□□□ -0.4
NVL-202ENST00000340871 MPHOSPH9Q99550 1183 aa12.55□□□□□ -0.4
NVL-202ENST00000340871 ABCC3O15438 1527 aa12.55□□□□□ -0.4
NVL-202ENST00000340871 ARHGAP31Q2M1Z3 1444 aa12.54□□□□□ -0.4
NVL-202ENST00000340871 CNKSR2Q8WXI2 1034 aa12.54□□□□□ -0.4
NVL-202ENST00000340871 RPRD2Q5VT52 1461 aaKnown RBP12.54□□□□□ -0.4
NVL-202ENST00000340871 EFCAB6Q5THR3 1501 aa12.53□□□□□ -0.4
NVL-202ENST00000340871 CNTLNQ9NXG0 1405 aa12.53□□□□□ -0.4
NVL-202ENST00000340871 MROH2AA6NES4 1674 aa12.52□□□□□ -0.41
NVL-202ENST00000340871 SLC4A1APQ9BWU0 796 aaKnown RBP12.52□□□□□ -0.41
NVL-202ENST00000340871 CAMSAP1Q5T5Y3 1602 aa12.52□□□□□ -0.41
NVL-202ENST00000340871 CEP152O94986 1710 aa12.51□□□□□ -0.41
NVL-202ENST00000340871 ADRA2BP18089 450 aa12.51□□□□□ -0.41
NVL-202ENST00000340871 E9PCH4 1651 aa12.5□□□□□ -0.41
NVL-202ENST00000340871 GGT6Q6P531 493 aa12.49□□□□□ -0.41
NVL-202ENST00000340871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.49□□□□□ -0.411e-6■■■■□ 21
NVL-202ENST00000340871 PTPRTO14522 1441 aa12.49□□□□□ -0.41
NVL-202ENST00000340871 CCER1Q8TC90 406 aaPredicted RBP12.48□□□□□ -0.41
NVL-202ENST00000340871 WASHC2CQ9Y4E1 1318 aa12.48□□□□□ -0.41
NVL-202ENST00000340871 ANKRD30BQ9BXX2 1392 aa12.48□□□□□ -0.41
NVL-202ENST00000340871 CDK11BP21127 795 aaKnown RBP12.48□□□□□ -0.41
NVL-202ENST00000340871 PKD2Q13563 968 aa12.48□□□□□ -0.41
NVL-202ENST00000340871 BCL11BQ9C0K0 894 aaPredicted RBP12.47□□□□□ -0.41
NVL-202ENST00000340871 ANO8Q9HCE9 1232 aaPredicted RBP12.47□□□□□ -0.41
NVL-202ENST00000340871 ADAMTSL3P82987 1691 aa12.47□□□□□ -0.41
NVL-202ENST00000340871 CLTCQ00610 1675 aaKnown RBP12.47□□□□□ -0.41
NVL-202ENST00000340871 TRPM2O94759 1503 aa12.47□□□□□ -0.41
NVL-202ENST00000340871 ARID4BQ4LE39 1312 aaPredicted RBP12.46□□□□□ -0.41
NVL-202ENST00000340871 SPHKAPQ2M3C7 1700 aa12.46□□□□□ -0.41
NVL-202ENST00000340871 NPATQ14207 1427 aa12.46□□□□□ -0.42
NVL-202ENST00000340871 NEURL4Q96JN8 1562 aa12.45□□□□□ -0.42
NVL-202ENST00000340871 FER1L4A9Z1Z3 1794 aa12.45□□□□□ -0.42
NVL-202ENST00000340871 NOS1P29475 1434 aa12.45□□□□□ -0.42
NVL-202ENST00000340871 FGD1P98174 961 aa12.44□□□□□ -0.42
NVL-202ENST00000340871 PLA2R1Q13018 1463 aa12.43□□□□□ -0.42
NVL-202ENST00000340871 SPATA31D1Q6ZQQ2 1576 aa12.43□□□□□ -0.42
NVL-202ENST00000340871 PREX1Q8TCU6 1659 aa12.43□□□□□ -0.42
NVL-202ENST00000340871 ESF1Q9H501 851 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms